RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 DNAH3Q8TD57 4116 aa4.07□□□□□ -1.76
PROM1-206ENST00000505450 KRTAP10-6P60371 365 aaPredicted RBP4.06□□□□□ -1.76
PROM1-206ENST00000505450 KRTAP12-2P59991 146 aa4.04□□□□□ -1.76
PROM1-206ENST00000505450 KRTAP10-8P60410 259 aa4.04□□□□□ -1.76
PROM1-206ENST00000505450 XP32Q5T750 250 aa4.03□□□□□ -1.76
PROM1-206ENST00000505450 DNAH6Q9C0G6 4158 aa4.02□□□□□ -1.77
PROM1-206ENST00000505450 HECTD4Q9Y4D8 3996 aa4.02□□□□□ -1.77
PROM1-206ENST00000505450 CAMK2N1Q7Z7J9 78 aa4.01□□□□□ -1.77
PROM1-206ENST00000505450 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
PROM1-206ENST00000505450 RYR1P21817 5038 aa4.01□□□□□ -1.77
PROM1-206ENST00000505450 KRTAP17-1Q9BYP8 105 aa4□□□□□ -1.77
PROM1-206ENST00000505450 FAT1Q14517 4588 aa4□□□□□ -1.77
PROM1-206ENST00000505450 RYR3Q15413 4870 aa4□□□□□ -1.77
PROM1-206ENST00000505450 KRTAP3-3Q9BYR6 98 aa3.99□□□□□ -1.77
PROM1-206ENST00000505450 KRTAP3-2Q9BYR7 98 aa3.98□□□□□ -1.77
PROM1-206ENST00000505450 DNAH5Q8TE73 4624 aa3.97□□□□□ -1.77
PROM1-206ENST00000505450 VPS13BQ7Z7G8 4022 aa3.97□□□□□ -1.77
PROM1-206ENST00000505450 KRTAP12-1P59990 96 aa3.97□□□□□ -1.77
PROM1-206ENST00000505450 KMT2CQ8NEZ4 4911 aaKnown RBP3.93□□□□□ -1.78
PROM1-206ENST00000505450 MT1HL1P0DM35 61 aa3.93□□□□□ -1.78
PROM1-206ENST00000505450 MYCBP2O75592 4640 aa3.92□□□□□ -1.78
PROM1-206ENST00000505450 DYNC2H1Q8NCM8 4307 aaKnown RBP3.92□□□□□ -1.78
PROM1-206ENST00000505450 PLAC4Q8WY50 150 aa3.91□□□□□ -1.78
PROM1-206ENST00000505450 KRTAP10-10P60014 251 aa3.9□□□□□ -1.78
PROM1-206ENST00000505450 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
PROM1-206ENST00000505450 BIRC6Q9NR09 4857 aa3.89□□□□□ -1.79
PROM1-206ENST00000505450 PCLOQ9Y6V0 5065 aa3.89□□□□□ -1.79
PROM1-206ENST00000505450 KRTAP10-4P60372 401 aaPredicted RBP3.88□□□□□ -1.79
PROM1-206ENST00000505450 HERC2O95714 4834 aa3.88□□□□□ -1.79
PROM1-206ENST00000505450 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
PROM1-206ENST00000505450 DYNC1H1Q14204 4646 aaKnown RBP3.87□□□□□ -1.79
PROM1-206ENST00000505450 PKHD1P08F94 4074 aa3.81□□□□□ -1.8
PROM1-206ENST00000505450 SACSQ9NZJ4 4579 aa3.8□□□□□ -1.8
PROM1-206ENST00000505450 APOBP04114 4563 aaKnown RBP3.8□□□□□ -1.8
PROM1-206ENST00000505450 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
PROM1-206ENST00000505450 EPPK1P58107 5090 aaKnown RBP3.77□□□□□ -1.81
PROM1-206ENST00000505450 RYR2Q92736 4967 aa3.76□□□□□ -1.81
PROM1-206ENST00000505450 FAT3Q8TDW7 4589 aa3.74□□□□□ -1.81
PROM1-206ENST00000505450 FAT2Q9NYQ8 4349 aa3.73□□□□□ -1.81
PROM1-206ENST00000505450 TNP1P09430 55 aa3.71□□□□□ -1.81
PROM1-206ENST00000505450 PP632Q6XCG6 107 aa3.71□□□□□ -1.81
PROM1-206ENST00000505450 FSIP2Q5CZC0 6907 aa3.71□□□□□ -1.82
PROM1-206ENST00000505450 LORP23490 312 aaPredicted RBP3.71□□□□□ -1.82
PROM1-206ENST00000505450 PKD1P98161 4303 aa3.7□□□□□ -1.82
PROM1-206ENST00000505450 HSPG2P98160 4391 aa3.67□□□□□ -1.82
PROM1-206ENST00000505450 LRP2P98164 4655 aa3.65□□□□□ -1.83
PROM1-206ENST00000505450 ABCA13Q86UQ4 5058 aa3.59□□□□□ -1.83
PROM1-206ENST00000505450 UBR4Q5T4S7 5183 aa3.59□□□□□ -1.83
PROM1-206ENST00000505450 HERC1Q15751 4861 aa3.57□□□□□ -1.84
PROM1-206ENST00000505450 PKHD1L1Q86WI1 4243 aa3.53□□□□□ -1.84
PROM1-206ENST00000505450 KRTAP4-1Q9BYQ7 146 aa3.51□□□□□ -1.85
PROM1-206ENST00000505450 PRO2289Q9P1D8 64 aa3.51□□□□□ -1.85
PROM1-206ENST00000505450 RNF213Q63HN8 5207 aa3.49□□□□□ -1.85
PROM1-206ENST00000505450 LPAP08519 4548 aa3.48□□□□□ -1.85
PROM1-206ENST00000505450 TNXBP22105 4242 aa3.45□□□□□ -1.86
PROM1-206ENST00000505450 MT1HP80294 61 aa3.4□□□□□ -1.86
PROM1-206ENST00000505450 KRTAP9-2Q9BYQ4 174 aa3.38□□□□□ -1.87
PROM1-206ENST00000505450 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
PROM1-206ENST00000505450 CRCT1Q9UGL9 99 aa3.32□□□□□ -1.88
PROM1-206ENST00000505450 KRTAP23-1A1A580 65 aa3.3□□□□□ -1.88
PROM1-206ENST00000505450 KRTAP9-6A0A140TA67 174 aa3.28□□□□□ -1.88
PROM1-206ENST00000505450 MUC2Q02817 5179 aa3.27□□□□□ -1.89
PROM1-206ENST00000505450 MT2AP02795 61 aa3.25□□□□□ -1.89
PROM1-206ENST00000505450 KRTAP12-3P60328 96 aa3.23□□□□□ -1.89
PROM1-206ENST00000505450 MT1FP04733 61 aa3.21□□□□□ -1.9
PROM1-206ENST00000505450 KRTAP10-12P60413 245 aa3.21□□□□□ -1.9
PROM1-206ENST00000505450 KRTAP19-2Q3LHN2 52 aa3.21□□□□□ -1.9
PROM1-206ENST00000505450 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
PROM1-206ENST00000505450 INE1O15225 51 aa3.2□□□□□ -1.9
PROM1-206ENST00000505450 MUC17Q685J3 4493 aa3.2□□□□□ -1.9
PROM1-206ENST00000505450 FAT4Q6V0I7 4981 aa3.2□□□□□ -1.9
PROM1-206ENST00000505450 HMCN2Q8NDA2 5059 aa3.19□□□□□ -1.9
PROM1-206ENST00000505450 SPRR2GQ9BYE4 73 aa3.19□□□□□ -1.9
PROM1-206ENST00000505450 KRTAP19-1Q8IUB9 90 aa3.19□□□□□ -1.9
PROM1-206ENST00000505450 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
PROM1-206ENST00000505450 FLGP20930 4061 aaPredicted RBP3.15□□□□□ -1.91
PROM1-206ENST00000505450 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.91
PROM1-206ENST00000505450 LCE2CQ5TA81 110 aa3.09□□□□□ -1.91
PROM1-206ENST00000505450 LCE2AQ5TA79 106 aaPredicted RBP3.09□□□□□ -1.92
PROM1-206ENST00000505450 SYNE2Q8WXH0 6885 aaKnown RBP3.07□□□□□ -1.92
PROM1-206ENST00000505450 KRTAP9-7A8MTY7 169 aa3.04□□□□□ -1.92
PROM1-206ENST00000505450 KRTAP10-7P60409 375 aaPredicted RBP3.04□□□□□ -1.92
PROM1-206ENST00000505450 KRTAP9-8Q9BYQ0 159 aa3.03□□□□□ -1.92
PROM1-206ENST00000505450 MT1XP80297 61 aa3.02□□□□□ -1.93
PROM1-206ENST00000505450 KRTAP10-5P60370 271 aa3.02□□□□□ -1.93
PROM1-206ENST00000505450 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
PROM1-206ENST00000505450 DSTQ03001 7570 aaKnown RBP3□□□□□ -1.93
PROM1-206ENST00000505450 SPRR2EP22531 72 aa3□□□□□ -1.93
PROM1-206ENST00000505450 SPRR2BP35325 72 aa3□□□□□ -1.93
PROM1-206ENST00000505450 SPRR2AP35326 72 aa3□□□□□ -1.93
PROM1-206ENST00000505450 MT1BP07438 61 aa3□□□□□ -1.93
PROM1-206ENST00000505450 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
PROM1-206ENST00000505450 KRTAP19-8Q3LI54 63 aa2.99□□□□□ -1.93
PROM1-206ENST00000505450 LCE2DQ5TA82 110 aaPredicted RBP2.97□□□□□ -1.93
PROM1-206ENST00000505450 LCE2BO14633 110 aa2.97□□□□□ -1.93
PROM1-206ENST00000505450 SYNE1Q8NF91 8797 aaKnown RBP2.96□□□□□ -1.93
PROM1-206ENST00000505450 KMT2DO14686 5537 aa2.96□□□□□ -1.94
PROM1-206ENST00000505450 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
PROM1-206ENST00000505450 KRTAP9-3Q9BYQ3 159 aa2.95□□□□□ -1.94
PROM1-206ENST00000505450 USH2AO75445 5202 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms