RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	NEB	P20929	6669 aa		7.25	□□□□□ -1.25
DDR1-256	ENST00000505066	ATOX1	O00244	68 aa		7.22	□□□□□ -1.25
DDR1-256	ENST00000505066	ACYP1	P07311	99 aa		7.2	□□□□□ -1.26
DDR1-256	ENST00000505066	UQCRQ	O14949	82 aa		7.18	□□□□□ -1.26
DDR1-256	ENST00000505066	HIST1H4A	P62805	103 aa	Known RBP	7.18	□□□□□ -1.26
DDR1-256	ENST00000505066	KRTAP3-3	Q9BYR6	98 aa		7.18	□□□□□ -1.26
DDR1-256	ENST00000505066	ATP5EP2	Q5VTU8	51 aa		7.17	□□□□□ -1.26
DDR1-256	ENST00000505066		H0Y9P7	68 aa		7.15	□□□□□ -1.26
DDR1-256	ENST00000505066	KRTAP20-1	Q3LI63	56 aa		7.15	□□□□□ -1.26
DDR1-256	ENST00000505066		A0A1B0GV90	55 aa		7.14	□□□□□ -1.27
DDR1-256	ENST00000505066		A8MUN3	132 aa		7.14	□□□□□ -1.27
DDR1-256	ENST00000505066	PRO2289	Q9P1D8	64 aa		7.14	□□□□□ -1.27
DDR1-256	ENST00000505066		H0YAA0	97 aa		7.13	□□□□□ -1.27
DDR1-256	ENST00000505066		A0A087WVE0	104 aa		7.09	□□□□□ -1.27
DDR1-256	ENST00000505066	ADM2	Q7Z4H4	148 aa		7.08	□□□□□ -1.28
DDR1-256	ENST00000505066	PLAC4	Q8WY50	150 aa		7.08	□□□□□ -1.28
DDR1-256	ENST00000505066	KRTAP5-9	P26371	169 aa		7.07	□□□□□ -1.28
DDR1-256	ENST00000505066	MUC12	Q9UKN1	5478 aa		7.07	□□□□□ -1.28
DDR1-256	ENST00000505066	FAM240A	A0A1B0GVK7	77 aa		7.05	□□□□□ -1.28
DDR1-256	ENST00000505066	MP68	P56378	58 aa		7.05	□□□□□ -1.28
DDR1-256	ENST00000505066	C20orf197	Q8N268	126 aa		7.05	□□□□□ -1.28
DDR1-256	ENST00000505066	LINC00208	Q96KT6	92 aa		7.02	□□□□□ -1.29
DDR1-256	ENST00000505066		R4GN34	69 aa		7	□□□□□ -1.29
DDR1-256	ENST00000505066	LINC00643	Q86TS7	51 aa		6.96	□□□□□ -1.3
DDR1-256	ENST00000505066	KMT2D	O14686	5537 aa		6.94	□□□□□ -1.3
DDR1-256	ENST00000505066	SPRR2F	Q96RM1	72 aa		6.93	□□□□□ -1.3
DDR1-256	ENST00000505066	KRTAP2-3	P0C7H8	128 aa		6.92	□□□□□ -1.3
DDR1-256	ENST00000505066	KRTAP2-4	Q9BYR9	128 aa		6.92	□□□□□ -1.3
DDR1-256	ENST00000505066	MDN1	Q9NU22	5596 aa		6.91	□□□□□ -1.3
DDR1-256	ENST00000505066		M0QZ58	72 aa		6.89	□□□□□ -1.31
DDR1-256	ENST00000505066		J3QR89	54 aa		6.88	□□□□□ -1.31
DDR1-256	ENST00000505066	SPRR2E	P22531	72 aa		6.88	□□□□□ -1.31
DDR1-256	ENST00000505066	SPRR2B	P35325	72 aa		6.88	□□□□□ -1.31
DDR1-256	ENST00000505066	SPRR2A	P35326	72 aa		6.88	□□□□□ -1.31
DDR1-256	ENST00000505066	KRTAP8-1	Q8IUC2	63 aa		6.88	□□□□□ -1.31
DDR1-256	ENST00000505066		H3BPC8	53 aa		6.86	□□□□□ -1.31
DDR1-256	ENST00000505066	SCGB1A1	P11684	91 aa		6.85	□□□□□ -1.31
DDR1-256	ENST00000505066	LINC01554	Q52M75	96 aa		6.84	□□□□□ -1.31
DDR1-256	ENST00000505066	MT1X	P80297	61 aa		6.82	□□□□□ -1.32
DDR1-256	ENST00000505066	OCR1	Q9BZK8	76 aa		6.82	□□□□□ -1.32
DDR1-256	ENST00000505066		P0C880	135 aa		6.78	□□□□□ -1.32
DDR1-256	ENST00000505066	KRTAP12-2	P59991	146 aa		6.77	□□□□□ -1.33
DDR1-256	ENST00000505066	SPTSSB	Q8NFR3	76 aa		6.77	□□□□□ -1.33
DDR1-256	ENST00000505066	DMAC1	Q96GE9	116 aa		6.77	□□□□□ -1.33
DDR1-256	ENST00000505066	MT-ATP8	P03928	68 aa		6.74	□□□□□ -1.33
DDR1-256	ENST00000505066	TRAV7	A0A075B6U4	112 aa		6.7	□□□□□ -1.34
DDR1-256	ENST00000505066		K7ERU9	68 aa		6.7	□□□□□ -1.34
DDR1-256	ENST00000505066	ACYP2	P14621	99 aa		6.69	□□□□□ -1.34
DDR1-256	ENST00000505066	KRTAP2-2	Q9BYT5	123 aa		6.68	□□□□□ -1.34
DDR1-256	ENST00000505066	KRTAP2-1	Q9BYU5	128 aa		6.68	□□□□□ -1.34
DDR1-256	ENST00000505066	SPRR2D	P22532	72 aa		6.67	□□□□□ -1.34
DDR1-256	ENST00000505066	LCE1A	Q5T7P2	110 aa		6.66	□□□□□ -1.34
DDR1-256	ENST00000505066	CHKB-CPT1B	H3BT56	60 aa		6.65	□□□□□ -1.34
DDR1-256	ENST00000505066	KRTAP3-2	Q9BYR7	98 aa		6.62	□□□□□ -1.35
DDR1-256	ENST00000505066	SMIM20	Q8N5G0	67 aa		6.57	□□□□□ -1.36
DDR1-256	ENST00000505066	KRTAP4-8	A0A0G2JLE6	195 aa		6.56	□□□□□ -1.36
DDR1-256	ENST00000505066	KRTAP4-8	Q9BYQ9	185 aa		6.56	□□□□□ -1.36
DDR1-256	ENST00000505066	KRTAP10-7	P60409	375 aa	Predicted RBP	6.51	□□□□□ -1.37
DDR1-256	ENST00000505066	KRTAP10-12	P60413	245 aa		6.5	□□□□□ -1.37
DDR1-256	ENST00000505066	LCE3B	Q5TA77	95 aa		6.47	□□□□□ -1.37
DDR1-256	ENST00000505066	CAMK2N1	Q7Z7J9	78 aa		6.46	□□□□□ -1.38
DDR1-256	ENST00000505066	SNURF	Q9Y675	71 aa		6.36	□□□□□ -1.39
DDR1-256	ENST00000505066	SEC61G	P60059	68 aa		6.34	□□□□□ -1.39
DDR1-256	ENST00000505066	SERP2	Q8N6R1	65 aa		6.32	□□□□□ -1.4
DDR1-256	ENST00000505066	SPANXA2-OT1	Q8N9U9	137 aa		6.32	□□□□□ -1.4
DDR1-256	ENST00000505066	SERP1	Q9Y6X1	66 aa		6.29	□□□□□ -1.4
DDR1-256	ENST00000505066		A0A0D9SG42	100 aa		6.19	□□□□□ -1.42
DDR1-256	ENST00000505066	KRTAP13-4	Q3LI77	160 aa		6.19	□□□□□ -1.42
DDR1-256	ENST00000505066	COX7C	P15954	63 aa		6.18	□□□□□ -1.42
DDR1-256	ENST00000505066	SPINT4	Q6UDR6	99 aa		6.15	□□□□□ -1.42
DDR1-256	ENST00000505066	COA5	Q86WW8	74 aa		6.15	□□□□□ -1.42
DDR1-256	ENST00000505066	KRTAP19-3	Q7Z4W3	81 aa		6.11	□□□□□ -1.43
DDR1-256	ENST00000505066	LCE5A	Q5TCM9	118 aa		6.1	□□□□□ -1.43
DDR1-256	ENST00000505066		A0A1B0GU33	70 aa		6.09	□□□□□ -1.43
DDR1-256	ENST00000505066	DST	Q03001	7570 aa	Known RBP	6.08	□□□□□ -1.44
DDR1-256	ENST00000505066	MT1E	P04732	61 aa		6.08	□□□□□ -1.44
DDR1-256	ENST00000505066	ANAPC13	Q9BS18	74 aa		6.08	□□□□□ -1.44
DDR1-256	ENST00000505066	GPR98	Q8WXG9	6306 aa		6.07	□□□□□ -1.44
DDR1-256	ENST00000505066	KRTAP19-7	Q3SYF9	63 aa		6.07	□□□□□ -1.44
DDR1-256	ENST00000505066	PP632	Q6XCG6	107 aa		6.07	□□□□□ -1.44
DDR1-256	ENST00000505066	SPATA8	Q6RVD6	105 aa		6.05	□□□□□ -1.44
DDR1-256	ENST00000505066	CYSTM1	Q9H1C7	97 aa		6.05	□□□□□ -1.44
DDR1-256	ENST00000505066		H7BZZ5	65 aa		6.03	□□□□□ -1.44
DDR1-256	ENST00000505066	KRTAP4-9	Q9BYQ8	210 aa		6.01	□□□□□ -1.45
DDR1-256	ENST00000505066	SMIM26	A0A096LP01	95 aa		6	□□□□□ -1.45
DDR1-256	ENST00000505066	MT1G	P13640	62 aa		5.99	□□□□□ -1.45
DDR1-256	ENST00000505066	CCDC179	H3BU77	68 aa		5.95	□□□□□ -1.46
DDR1-256	ENST00000505066	KRTAP19-5	Q3LI72	72 aa		5.95	□□□□□ -1.46
DDR1-256	ENST00000505066		A0A1B0GU69	56 aa		5.94	□□□□□ -1.46
DDR1-256	ENST00000505066	KRTAP12-1	P59990	96 aa		5.92	□□□□□ -1.46
DDR1-256	ENST00000505066	LCE4A	Q5TA78	99 aa		5.88	□□□□□ -1.47
DDR1-256	ENST00000505066	TNP1	P09430	55 aa		5.87	□□□□□ -1.47
DDR1-256	ENST00000505066	LCE1D	Q5T752	114 aa		5.85	□□□□□ -1.47
DDR1-256	ENST00000505066	MT4	P47944	62 aa		5.82	□□□□□ -1.48
DDR1-256	ENST00000505066	MT1M	Q8N339	61 aa		5.81	□□□□□ -1.48
DDR1-256	ENST00000505066	PRR15L	Q9BU68	103 aa		5.8	□□□□□ -1.48
DDR1-256	ENST00000505066	ATP5E	P56381	51 aa	Predicted RBP	5.78	□□□□□ -1.48
DDR1-256	ENST00000505066	MT1L	Q93083	61 aa		5.78	□□□□□ -1.48
DDR1-256	ENST00000505066	C10orf95	Q9H7T3	257 aa		5.76	□□□□□ -1.49
DDR1-256	ENST00000505066		A8MU10	97 aa		5.75	□□□□□ -1.49

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