RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 V9GYY9 64 aa2.49□□□□□ -2.01
LMNB1-208ENST00000504788 FAM236AA0A1B0GUQ0 79 aa2.48□□□□□ -2.01
LMNB1-208ENST00000504788 FAM236BA0A1B0GV22 79 aa2.48□□□□□ -2.01
LMNB1-208ENST00000504788 TMEM258P61165 79 aa2.48□□□□□ -2.01
LMNB1-208ENST00000504788 COX7CP15954 63 aa2.47□□□□□ -2.01
LMNB1-208ENST00000504788 TP53AIP1Q9HCN2 124 aa2.47□□□□□ -2.01
LMNB1-208ENST00000504788 NDUFS5O43920 106 aa2.47□□□□□ -2.01
LMNB1-208ENST00000504788 IGKV2-30P06310 120 aa2.47□□□□□ -2.01
LMNB1-208ENST00000504788 A0A0A0MQY5 61 aa2.46□□□□□ -2.02
LMNB1-208ENST00000504788 CYSTM1Q9H1C7 97 aa2.45□□□□□ -2.02
LMNB1-208ENST00000504788 TRAV22A0A0B4J277 110 aa2.45□□□□□ -2.02
LMNB1-208ENST00000504788 FAM236DA0A1B0GTK5 79 aa2.44□□□□□ -2.02
LMNB1-208ENST00000504788 FAM236CP0DP71 79 aa2.44□□□□□ -2.02
LMNB1-208ENST00000504788 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
LMNB1-208ENST00000504788 C7orf65Q6ZTY9 151 aa2.44□□□□□ -2.02
LMNB1-208ENST00000504788 CYP4F30PQ9H0H9 118 aa2.44□□□□□ -2.02
LMNB1-208ENST00000504788 IGKV2D-30A0A075B6S6 120 aa2.43□□□□□ -2.02
LMNB1-208ENST00000504788 A0A0U1RQV1 116 aa2.43□□□□□ -2.02
LMNB1-208ENST00000504788 ATOX1O00244 68 aa2.43□□□□□ -2.02
LMNB1-208ENST00000504788 KRTAP10-6P60371 365 aaPredicted RBP2.42□□□□□ -2.02
LMNB1-208ENST00000504788 H0Y9P7 68 aa2.41□□□□□ -2.02
LMNB1-208ENST00000504788 COX6B2Q6YFQ2 88 aa2.41□□□□□ -2.02
LMNB1-208ENST00000504788 LOC101927531A0A1B0GV80 90 aa2.4□□□□□ -2.02
LMNB1-208ENST00000504788 KLKP1Q107X0 134 aa2.4□□□□□ -2.02
LMNB1-208ENST00000504788 SERP2Q8N6R1 65 aa2.4□□□□□ -2.02
LMNB1-208ENST00000504788 RBM12B-AS1Q9P1G2 102 aa2.4□□□□□ -2.03
LMNB1-208ENST00000504788 SERP1Q9Y6X1 66 aa2.4□□□□□ -2.03
LMNB1-208ENST00000504788 C1orf64Q8NEQ6 169 aa2.39□□□□□ -2.03
LMNB1-208ENST00000504788 LINC00208Q96KT6 92 aa2.39□□□□□ -2.03
LMNB1-208ENST00000504788 TRAV7A0A075B6U4 112 aa2.38□□□□□ -2.03
LMNB1-208ENST00000504788 SMIM26A0A096LP01 95 aa2.38□□□□□ -2.03
LMNB1-208ENST00000504788 H1FX-AS1Q4G0G2 97 aa2.38□□□□□ -2.03
LMNB1-208ENST00000504788 H3BPC8 53 aa2.38□□□□□ -2.03
LMNB1-208ENST00000504788 PMAIP1Q13794 54 aa2.38□□□□□ -2.03
LMNB1-208ENST00000504788 BRK1Q8WUW1 75 aa2.37□□□□□ -2.03
LMNB1-208ENST00000504788 MT2AP02795 61 aa2.36□□□□□ -2.03
LMNB1-208ENST00000504788 H7BZZ5 65 aa2.35□□□□□ -2.03
LMNB1-208ENST00000504788 MT1FP04733 61 aa2.35□□□□□ -2.03
LMNB1-208ENST00000504788 MP68P56378 58 aa2.35□□□□□ -2.03
LMNB1-208ENST00000504788 LCA10Q71F78 164 aa2.35□□□□□ -2.03
LMNB1-208ENST00000504788 DMAC1Q96GE9 116 aa2.33□□□□□ -2.04
LMNB1-208ENST00000504788 M0R2T5 61 aa2.33□□□□□ -2.04
LMNB1-208ENST00000504788 ATP5EP56381 51 aaPredicted RBP2.33□□□□□ -2.04
LMNB1-208ENST00000504788 C20orf197Q8N268 126 aa2.33□□□□□ -2.04
LMNB1-208ENST00000504788 SNURFQ9Y675 71 aa2.33□□□□□ -2.04
LMNB1-208ENST00000504788 A8MUN3 132 aa2.32□□□□□ -2.04
LMNB1-208ENST00000504788 USH2AO75445 5202 aa2.32□□□□□ -2.04
LMNB1-208ENST00000504788 S4R3F8 94 aa2.31□□□□□ -2.04
LMNB1-208ENST00000504788 NDUFC1O43677 76 aa2.3□□□□□ -2.04
LMNB1-208ENST00000504788 SPANXA2-OT1Q8N9U9 137 aa2.3□□□□□ -2.04
LMNB1-208ENST00000504788 KRTAP15-1Q3LI76 137 aa2.29□□□□□ -2.04
LMNB1-208ENST00000504788 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
LMNB1-208ENST00000504788 KRTAP10-7P60409 375 aaPredicted RBP2.28□□□□□ -2.04
LMNB1-208ENST00000504788 CSAG1Q6PB30 78 aa2.27□□□□□ -2.05
LMNB1-208ENST00000504788 KTN1-AS1Q86SY8 53 aa2.27□□□□□ -2.05
LMNB1-208ENST00000504788 H0YAA0 97 aa2.26□□□□□ -2.05
LMNB1-208ENST00000504788 Q1T7F1 81 aa2.26□□□□□ -2.05
LMNB1-208ENST00000504788 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
LMNB1-208ENST00000504788 KRTAP10-10P60014 251 aa2.26□□□□□ -2.05
LMNB1-208ENST00000504788 FSIP2Q5CZC0 6907 aa2.25□□□□□ -2.05
LMNB1-208ENST00000504788 ACYP2P14621 99 aa2.24□□□□□ -2.05
LMNB1-208ENST00000504788 SPRR2GQ9BYE4 73 aa2.24□□□□□ -2.05
LMNB1-208ENST00000504788 A6NN06 94 aa2.21□□□□□ -2.05
LMNB1-208ENST00000504788 MT1BP07438 61 aa2.21□□□□□ -2.05
LMNB1-208ENST00000504788 P0C880 135 aa2.21□□□□□ -2.05
LMNB1-208ENST00000504788 KRTAP19-8Q3LI54 63 aa2.21□□□□□ -2.05
LMNB1-208ENST00000504788 A8MU10 97 aa2.21□□□□□ -2.06
LMNB1-208ENST00000504788 Q5VV11 94 aa2.2□□□□□ -2.06
LMNB1-208ENST00000504788 COA5Q86WW8 74 aa2.2□□□□□ -2.06
LMNB1-208ENST00000504788 PSPHP1O15172 72 aa2.19□□□□□ -2.06
LMNB1-208ENST00000504788 ADM2Q7Z4H4 148 aa2.19□□□□□ -2.06
LMNB1-208ENST00000504788 CRCT1Q9UGL9 99 aa2.19□□□□□ -2.06
LMNB1-208ENST00000504788 CRIPTQ9P021 101 aa2.18□□□□□ -2.06
LMNB1-208ENST00000504788 KRTAP19-6Q3LI70 58 aa2.17□□□□□ -2.06
LMNB1-208ENST00000504788 FCGBPQ9Y6R7 5405 aaPredicted RBP2.17□□□□□ -2.06
LMNB1-208ENST00000504788 KRTAP13-4Q3LI77 160 aa2.15□□□□□ -2.06
LMNB1-208ENST00000504788 CHKB-CPT1BH3BT56 60 aa2.14□□□□□ -2.07
LMNB1-208ENST00000504788 SPTSSBQ8NFR3 76 aa2.14□□□□□ -2.07
LMNB1-208ENST00000504788 CDC42SE1Q9NRR8 79 aa2.14□□□□□ -2.07
LMNB1-208ENST00000504788 LINC01554Q52M75 96 aa2.14□□□□□ -2.07
LMNB1-208ENST00000504788 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
LMNB1-208ENST00000504788 LCE1EQ5T753 118 aa2.12□□□□□ -2.07
LMNB1-208ENST00000504788 PRR15LQ9BU68 103 aa2.12□□□□□ -2.07
LMNB1-208ENST00000504788 A6NED7 52 aa2.11□□□□□ -2.07
LMNB1-208ENST00000504788 R4GN34 69 aa2.11□□□□□ -2.07
LMNB1-208ENST00000504788 M0QZ58 72 aa2.1□□□□□ -2.07
LMNB1-208ENST00000504788 KRTAP10-5P60370 271 aa2.1□□□□□ -2.07
LMNB1-208ENST00000504788 MT1XP80297 61 aa2.1□□□□□ -2.07
LMNB1-208ENST00000504788 KRTAP5-9P26371 169 aa2.09□□□□□ -2.08
LMNB1-208ENST00000504788 PRAC1Q96KF2 57 aa2.09□□□□□ -2.08
LMNB1-208ENST00000504788 LINC01558Q9Y6Z2 57 aa2.09□□□□□ -2.08
LMNB1-208ENST00000504788 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
LMNB1-208ENST00000504788 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
LMNB1-208ENST00000504788 A0A1B0GU33 70 aa2.05□□□□□ -2.08
LMNB1-208ENST00000504788 A0A1B0GU69 56 aa2.05□□□□□ -2.08
LMNB1-208ENST00000504788 SPATA8Q6RVD6 105 aa2.05□□□□□ -2.08
LMNB1-208ENST00000504788 MACF1Q9UPN3 7388 aaKnown RBP2.04□□□□□ -2.08
LMNB1-208ENST00000504788 KMT2DO14686 5537 aa2.04□□□□□ -2.08
LMNB1-208ENST00000504788 KRTAP12-1P59990 96 aa2.03□□□□□ -2.08
LMNB1-208ENST00000504788 LCE1AQ5T7P2 110 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms