RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 hDV103S1A0JD37 113 aa4.29□□□□□ -1.72
PDGFC-204ENST00000504672 Q8N9L7 120 aa4.29□□□□□ -1.72
PDGFC-204ENST00000504672 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
PDGFC-204ENST00000504672 IMUPQ9GZP8 106 aa4.28□□□□□ -1.72
PDGFC-204ENST00000504672 HCG22E2RYF7 251 aa4.27□□□□□ -1.73
PDGFC-204ENST00000504672 KRTAP2-3P0C7H8 128 aa4.27□□□□□ -1.73
PDGFC-204ENST00000504672 KRTAP2-4Q9BYR9 128 aa4.27□□□□□ -1.73
PDGFC-204ENST00000504672 A6NN06 94 aa4.25□□□□□ -1.73
PDGFC-204ENST00000504672 CASC2Q6XLA1 102 aa4.25□□□□□ -1.73
PDGFC-204ENST00000504672 ZCCHC13Q8WW36 166 aaKnown RBP4.24□□□□□ -1.73
PDGFC-204ENST00000504672 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
PDGFC-204ENST00000504672 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
PDGFC-204ENST00000504672 TP53AIP1Q9HCN2 124 aa4.22□□□□□ -1.73
PDGFC-204ENST00000504672 HIST1H4AP62805 103 aaKnown RBP4.21□□□□□ -1.74
PDGFC-204ENST00000504672 WFDC13Q8IUB5 93 aa4.21□□□□□ -1.74
PDGFC-204ENST00000504672 MT-ATP8P03928 68 aa4.2□□□□□ -1.74
PDGFC-204ENST00000504672 A0A087WVE0 104 aa4.19□□□□□ -1.74
PDGFC-204ENST00000504672 SPINK7P58062 85 aa4.19□□□□□ -1.74
PDGFC-204ENST00000504672 Q5W150 140 aa4.19□□□□□ -1.74
PDGFC-204ENST00000504672 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
PDGFC-204ENST00000504672 OCR1Q9BZK8 76 aa4.17□□□□□ -1.74
PDGFC-204ENST00000504672 UQCRQO14949 82 aa4.15□□□□□ -1.75
PDGFC-204ENST00000504672 MT1BP07438 61 aa4.14□□□□□ -1.75
PDGFC-204ENST00000504672 NDUFS5O43920 106 aa4.13□□□□□ -1.75
PDGFC-204ENST00000504672 TRAV22A0A0B4J277 110 aa4.12□□□□□ -1.75
PDGFC-204ENST00000504672 IGKV2-30P06310 120 aa4.12□□□□□ -1.75
PDGFC-204ENST00000504672 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
PDGFC-204ENST00000504672 C7orf65Q6ZTY9 151 aa4.11□□□□□ -1.75
PDGFC-204ENST00000504672 SMIM20Q8N5G0 67 aa4.11□□□□□ -1.75
PDGFC-204ENST00000504672 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
PDGFC-204ENST00000504672 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
PDGFC-204ENST00000504672 H3BPC8 53 aa4.1□□□□□ -1.75
PDGFC-204ENST00000504672 ATOX1O00244 68 aa4.1□□□□□ -1.75
PDGFC-204ENST00000504672 SPRR2EP22531 72 aa4.1□□□□□ -1.75
PDGFC-204ENST00000504672 SPRR2BP35325 72 aa4.1□□□□□ -1.75
PDGFC-204ENST00000504672 SPRR2AP35326 72 aa4.1□□□□□ -1.75
PDGFC-204ENST00000504672 C5orf47Q569G3 176 aa4.1□□□□□ -1.75
PDGFC-204ENST00000504672 FAM236AA0A1B0GUQ0 79 aa4.09□□□□□ -1.75
PDGFC-204ENST00000504672 FAM236BA0A1B0GV22 79 aa4.09□□□□□ -1.75
PDGFC-204ENST00000504672 LOC101927531A0A1B0GV80 90 aa4.09□□□□□ -1.75
PDGFC-204ENST00000504672 TRAV7A0A075B6U4 112 aa4.08□□□□□ -1.76
PDGFC-204ENST00000504672 Q5VV11 94 aa4.08□□□□□ -1.76
PDGFC-204ENST00000504672 CYP4F30PQ9H0H9 118 aa4.08□□□□□ -1.76
PDGFC-204ENST00000504672 H1FX-AS1Q4G0G2 97 aa4.07□□□□□ -1.76
PDGFC-204ENST00000504672 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
PDGFC-204ENST00000504672 H0Y9P7 68 aa4.05□□□□□ -1.76
PDGFC-204ENST00000504672 IGKV2D-30A0A075B6S6 120 aa4.04□□□□□ -1.76
PDGFC-204ENST00000504672 SCGB1A1P11684 91 aa4.04□□□□□ -1.76
PDGFC-204ENST00000504672 MP68P56378 58 aa4.03□□□□□ -1.76
PDGFC-204ENST00000504672 KRTAP19-8Q3LI54 63 aa4.03□□□□□ -1.76
PDGFC-204ENST00000504672 KRTAP15-1Q3LI76 137 aa4.03□□□□□ -1.76
PDGFC-204ENST00000504672 SERP2Q8N6R1 65 aa4.03□□□□□ -1.76
PDGFC-204ENST00000504672 C1orf64Q8NEQ6 169 aa4.02□□□□□ -1.77
PDGFC-204ENST00000504672 LINC00208Q96KT6 92 aa4□□□□□ -1.77
PDGFC-204ENST00000504672 KLKP1Q107X0 134 aa3.99□□□□□ -1.77
PDGFC-204ENST00000504672 C4orf26Q17RF5 130 aa3.98□□□□□ -1.77
PDGFC-204ENST00000504672 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
PDGFC-204ENST00000504672 SPRR2GQ9BYE4 73 aa3.98□□□□□ -1.77
PDGFC-204ENST00000504672 A8MUN3 132 aa3.97□□□□□ -1.77
PDGFC-204ENST00000504672 SPRR2DP22532 72 aa3.97□□□□□ -1.77
PDGFC-204ENST00000504672 COX7CP15954 63 aa3.96□□□□□ -1.78
PDGFC-204ENST00000504672 SEC61GP60059 68 aa3.95□□□□□ -1.78
PDGFC-204ENST00000504672 SPANXA2-OT1Q8N9U9 137 aa3.93□□□□□ -1.78
PDGFC-204ENST00000504672 DMAC1Q96GE9 116 aa3.93□□□□□ -1.78
PDGFC-204ENST00000504672 C20orf197Q8N268 126 aa3.91□□□□□ -1.78
PDGFC-204ENST00000504672 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
PDGFC-204ENST00000504672 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.79
PDGFC-204ENST00000504672 NDUFC1O43677 76 aa3.89□□□□□ -1.79
PDGFC-204ENST00000504672 H7BZZ5 65 aa3.88□□□□□ -1.79
PDGFC-204ENST00000504672 ANAPC13Q9BS18 74 aa3.88□□□□□ -1.79
PDGFC-204ENST00000504672 SNURFQ9Y675 71 aa3.88□□□□□ -1.79
PDGFC-204ENST00000504672 LCA10Q71F78 164 aa3.86□□□□□ -1.79
PDGFC-204ENST00000504672 S4R3F8 94 aa3.86□□□□□ -1.79
PDGFC-204ENST00000504672 CYSTM1Q9H1C7 97 aa3.85□□□□□ -1.79
PDGFC-204ENST00000504672 CSAG1Q6PB30 78 aa3.84□□□□□ -1.79
PDGFC-204ENST00000504672 H0YAA0 97 aa3.83□□□□□ -1.8
PDGFC-204ENST00000504672 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
PDGFC-204ENST00000504672 CCDC179H3BU77 68 aa3.82□□□□□ -1.8
PDGFC-204ENST00000504672 ACYP2P14621 99 aa3.82□□□□□ -1.8
PDGFC-204ENST00000504672 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
PDGFC-204ENST00000504672 MT1XP80297 61 aa3.78□□□□□ -1.8
PDGFC-204ENST00000504672 ATP5EP56381 51 aaPredicted RBP3.76□□□□□ -1.81
PDGFC-204ENST00000504672 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
PDGFC-204ENST00000504672 TMEM258P61165 79 aa3.74□□□□□ -1.81
PDGFC-204ENST00000504672 PRO2289Q9P1D8 64 aa3.74□□□□□ -1.81
PDGFC-204ENST00000504672 COA5Q86WW8 74 aa3.72□□□□□ -1.81
PDGFC-204ENST00000504672 CRIPTQ9P021 101 aa3.72□□□□□ -1.81
PDGFC-204ENST00000504672 SPTSSBQ8NFR3 76 aa3.71□□□□□ -1.82
PDGFC-204ENST00000504672 KRTAP12-2P59991 146 aa3.7□□□□□ -1.82
PDGFC-204ENST00000504672 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
PDGFC-204ENST00000504672 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
PDGFC-204ENST00000504672 CHKB-CPT1BH3BT56 60 aa3.67□□□□□ -1.82
PDGFC-204ENST00000504672 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
PDGFC-204ENST00000504672 P0C880 135 aa3.64□□□□□ -1.83
PDGFC-204ENST00000504672 ADM2Q7Z4H4 148 aa3.64□□□□□ -1.83
PDGFC-204ENST00000504672 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
PDGFC-204ENST00000504672 RPS28P62857 69 aaKnown RBP3.62□□□□□ -1.83
PDGFC-204ENST00000504672 SERP1Q9Y6X1 66 aa3.61□□□□□ -1.83
PDGFC-204ENST00000504672 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
PDGFC-204ENST00000504672 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms