RNA–Protein interactions for RNA: ENST00000504447.1

FBXO38-207, Transcript of F-box protein 38, humanhuman

TSL 3

Gene FBXO38, Length 1,716 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-207ENST00000504447 RETNLBQ9BQ08 111 aa5.09□□□□□ -1.59
FBXO38-207ENST00000504447 FAT2Q9NYQ8 4349 aa5.08□□□□□ -1.6
FBXO38-207ENST00000504447 IGKV2D-30A0A075B6S6 120 aa5.08□□□□□ -1.6
FBXO38-207ENST00000504447 A0A1B0GU69 56 aa5.08□□□□□ -1.6
FBXO38-207ENST00000504447 LRP1BQ9NZR2 4599 aa5.07□□□□□ -1.6
FBXO38-207ENST00000504447 PKD1P98161 4303 aa5.06□□□□□ -1.6
FBXO38-207ENST00000504447 SPATA8Q6RVD6 105 aa5.06□□□□□ -1.6
FBXO38-207ENST00000504447 C7orf65Q6ZTY9 151 aa5.05□□□□□ -1.6
FBXO38-207ENST00000504447 LINC00304Q8N9R0 145 aa5.03□□□□□ -1.6
FBXO38-207ENST00000504447 UQCR11O14957 56 aa5.02□□□□□ -1.61
FBXO38-207ENST00000504447 VPS13BQ7Z7G8 4022 aa5□□□□□ -1.61
FBXO38-207ENST00000504447 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
FBXO38-207ENST00000504447 A0A1B0GVY2 172 aa4.97□□□□□ -1.61
FBXO38-207ENST00000504447 C20orf166-AS1Q96NR2 134 aa4.97□□□□□ -1.61
FBXO38-207ENST00000504447 RBM12B-AS1Q9P1G2 102 aa4.97□□□□□ -1.61
FBXO38-207ENST00000504447 A8MUU9 505 aa4.97□□□□□ -1.61
FBXO38-207ENST00000504447 EPPK1P58107 5090 aaKnown RBP4.95□□□□□ -1.62
FBXO38-207ENST00000504447 PKHD1P08F94 4074 aa4.95□□□□□ -1.62
FBXO38-207ENST00000504447 DYNC1H1Q14204 4646 aaKnown RBP4.94□□□□□ -1.62
FBXO38-207ENST00000504447 Q8N1X5 172 aa4.92□□□□□ -1.62
FBXO38-207ENST00000504447 KRTAP10-4P60372 401 aaPredicted RBP4.91□□□□□ -1.62
FBXO38-207ENST00000504447 SMR3BP02814 79 aaPredicted RBP4.89□□□□□ -1.63
FBXO38-207ENST00000504447 C9orf92A6NGG3 77 aa4.87□□□□□ -1.63
FBXO38-207ENST00000504447 APOBP04114 4563 aaKnown RBP4.87□□□□□ -1.63
FBXO38-207ENST00000504447 KRTAP3-1Q9BYR8 98 aa4.86□□□□□ -1.63
FBXO38-207ENST00000504447 PKHD1L1Q86WI1 4243 aa4.86□□□□□ -1.63
FBXO38-207ENST00000504447 BIRC6Q9NR09 4857 aa4.84□□□□□ -1.63
FBXO38-207ENST00000504447 KIAA1109Q2LD37 5005 aa4.84□□□□□ -1.63
FBXO38-207ENST00000504447 RYR1P21817 5038 aa4.82□□□□□ -1.64
FBXO38-207ENST00000504447 COX6B2Q6YFQ2 88 aa4.82□□□□□ -1.64
FBXO38-207ENST00000504447 A0A1B0GU33 70 aa4.81□□□□□ -1.64
FBXO38-207ENST00000504447 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
FBXO38-207ENST00000504447 HSPG2P98160 4391 aa4.81□□□□□ -1.64
FBXO38-207ENST00000504447 ADM2Q7Z4H4 148 aa4.8□□□□□ -1.64
FBXO38-207ENST00000504447 FAT1Q14517 4588 aa4.8□□□□□ -1.64
FBXO38-207ENST00000504447 H0YAA0 97 aa4.79□□□□□ -1.64
FBXO38-207ENST00000504447 H1FX-AS1Q4G0G2 97 aa4.79□□□□□ -1.64
FBXO38-207ENST00000504447 KRTAP10-8P60410 259 aa4.77□□□□□ -1.65
FBXO38-207ENST00000504447 LINC01554Q52M75 96 aa4.75□□□□□ -1.65
FBXO38-207ENST00000504447 HERC2O95714 4834 aa4.74□□□□□ -1.65
FBXO38-207ENST00000504447 FLG2Q5D862 2391 aaPredicted RBP4.72□□□□□ -1.65
FBXO38-207ENST00000504447 CSAG1Q6PB30 78 aa4.72□□□□□ -1.65
FBXO38-207ENST00000504447 RPL37P61927 97 aaKnown RBP4.71□□□□□ -1.66
FBXO38-207ENST00000504447 K7ERS5 55 aa4.69□□□□□ -1.66
FBXO38-207ENST00000504447 Q5VSD8 79 aa4.66□□□□□ -1.66
FBXO38-207ENST00000504447 ABCA13Q86UQ4 5058 aa4.66□□□□□ -1.66
FBXO38-207ENST00000504447 FAT3Q8TDW7 4589 aa4.65□□□□□ -1.67
FBXO38-207ENST00000504447 TNXBP22105 4242 aa4.64□□□□□ -1.67
FBXO38-207ENST00000504447 KRTAP10-6P60371 365 aaPredicted RBP4.63□□□□□ -1.67
FBXO38-207ENST00000504447 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
FBXO38-207ENST00000504447 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
FBXO38-207ENST00000504447 S4R3F8 94 aa4.62□□□□□ -1.67
FBXO38-207ENST00000504447 PCLOQ9Y6V0 5065 aa4.6□□□□□ -1.67
FBXO38-207ENST00000504447 MYCBP2O75592 4640 aa4.59□□□□□ -1.67
FBXO38-207ENST00000504447 LRP1Q07954 4544 aaKnown RBP4.58□□□□□ -1.68
FBXO38-207ENST00000504447 ROMO1P60602 79 aa4.57□□□□□ -1.68
FBXO38-207ENST00000504447 MT1HL1P0DM35 61 aa4.55□□□□□ -1.68
FBXO38-207ENST00000504447 KRTAP13-4Q3LI77 160 aa4.54□□□□□ -1.68
FBXO38-207ENST00000504447 DMBT1Q9UGM3 2413 aaPredicted RBP4.53□□□□□ -1.68
FBXO38-207ENST00000504447 P0C880 135 aa4.51□□□□□ -1.69
FBXO38-207ENST00000504447 TPRXLQ17RH7 258 aa4.51□□□□□ -1.69
FBXO38-207ENST00000504447 A0A0D9SG42 100 aa4.49□□□□□ -1.69
FBXO38-207ENST00000504447 M0QZ58 72 aa4.47□□□□□ -1.69
FBXO38-207ENST00000504447 CRIPTQ9P021 101 aa4.43□□□□□ -1.7
FBXO38-207ENST00000504447 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
FBXO38-207ENST00000504447 HERC1Q15751 4861 aa4.41□□□□□ -1.7
FBXO38-207ENST00000504447 KRTAP12-2P59991 146 aa4.41□□□□□ -1.7
FBXO38-207ENST00000504447 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
FBXO38-207ENST00000504447 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
FBXO38-207ENST00000504447 HMCN2Q8NDA2 5059 aa4.35□□□□□ -1.71
FBXO38-207ENST00000504447 LRP2P98164 4655 aa4.31□□□□□ -1.72
FBXO38-207ENST00000504447 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
FBXO38-207ENST00000504447 R4GN34 69 aa4.28□□□□□ -1.72
FBXO38-207ENST00000504447 LPAP08519 4548 aa4.26□□□□□ -1.73
FBXO38-207ENST00000504447 UBR4Q5T4S7 5183 aa4.23□□□□□ -1.73
FBXO38-207ENST00000504447 KRTAP4-1Q9BYQ7 146 aa4.2□□□□□ -1.74
FBXO38-207ENST00000504447 KRTAP19-2Q3LHN2 52 aa4.19□□□□□ -1.74
FBXO38-207ENST00000504447 MUC17Q685J3 4493 aa4.19□□□□□ -1.74
FBXO38-207ENST00000504447 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
FBXO38-207ENST00000504447 KRTAP10-7P60409 375 aaPredicted RBP4.12□□□□□ -1.75
FBXO38-207ENST00000504447 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
FBXO38-207ENST00000504447 RNF213Q63HN8 5207 aa4.09□□□□□ -1.75
FBXO38-207ENST00000504447 MUC2Q02817 5179 aa4.08□□□□□ -1.76
FBXO38-207ENST00000504447 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
FBXO38-207ENST00000504447 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
FBXO38-207ENST00000504447 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
FBXO38-207ENST00000504447 PLAC4Q8WY50 150 aa4.04□□□□□ -1.76
FBXO38-207ENST00000504447 FLGP20930 4061 aaPredicted RBP4.02□□□□□ -1.77
FBXO38-207ENST00000504447 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
FBXO38-207ENST00000504447 TNP1P09430 55 aa3.95□□□□□ -1.78
FBXO38-207ENST00000504447 FAT4Q6V0I7 4981 aa3.94□□□□□ -1.78
FBXO38-207ENST00000504447 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
FBXO38-207ENST00000504447 SPRR2GQ9BYE4 73 aa3.91□□□□□ -1.78
FBXO38-207ENST00000504447 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
FBXO38-207ENST00000504447 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
FBXO38-207ENST00000504447 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
FBXO38-207ENST00000504447 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
FBXO38-207ENST00000504447 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
FBXO38-207ENST00000504447 MT1HP80294 61 aa3.8□□□□□ -1.8
FBXO38-207ENST00000504447 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms