RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 PREX2Q70Z35 1606 aa-0.13□□□□□ -2.43
SUB1-204ENST00000504016 LINC01546A6NGU7 62 aa-0.14□□□□□ -2.43
SUB1-204ENST00000504016 KRTAP19-8Q3LI54 63 aa-0.14□□□□□ -2.43
SUB1-204ENST00000504016 A0A1B0GUL6 1792 aa-0.14□□□□□ -2.43
SUB1-204ENST00000504016 TRIOO75962 3097 aa-0.15□□□□□ -2.43
SUB1-204ENST00000504016 FANCD2Q9BXW9 1451 aa-0.15□□□□□ -2.43
SUB1-204ENST00000504016 KIF21BO75037 1637 aa-0.15□□□□□ -2.43
SUB1-204ENST00000504016 DNAH11Q96DT5 4516 aa-0.16□□□□□ -2.43
SUB1-204ENST00000504016 APOBP04114 4563 aaKnown RBP-0.16□□□□□ -2.43
SUB1-204ENST00000504016 SPART-AS1P0CW21 52 aa-0.16□□□□□ -2.44
SUB1-204ENST00000504016 DEFB1P60022 68 aa-0.16□□□□□ -2.44
SUB1-204ENST00000504016 COL6A5A8TX70 2615 aa-0.16□□□□□ -2.44
SUB1-204ENST00000504016 TEX15Q9BXT5 2789 aa-0.16□□□□□ -2.44
SUB1-204ENST00000504016 KMT2CQ8NEZ4 4911 aaKnown RBP-0.16□□□□□ -2.44
SUB1-204ENST00000504016 SPTAN1Q13813 2472 aaKnown RBP-0.16□□□□□ -2.44
SUB1-204ENST00000504016 DSTQ03001 7570 aaKnown RBP-0.17□□□□□ -2.44
SUB1-204ENST00000504016 HERC1Q15751 4861 aa-0.17□□□□□ -2.44
SUB1-204ENST00000504016 LRBAP50851 2863 aa-0.17□□□□□ -2.44
SUB1-204ENST00000504016 FAT1Q14517 4588 aa-0.17□□□□□ -2.44
SUB1-204ENST00000504016 TFF3Q07654 80 aa-0.18□□□□□ -2.44
SUB1-204ENST00000504016 KRTAP8-1Q8IUC2 63 aa-0.18□□□□□ -2.44
SUB1-204ENST00000504016 LMO7Q8WWI1 1683 aa-0.18□□□□□ -2.44
SUB1-204ENST00000504016 SPENQ96T58 3664 aaKnown RBP-0.18□□□□□ -2.44
SUB1-204ENST00000504016 TRPM2O94759 1503 aa-0.18□□□□□ -2.44
SUB1-204ENST00000504016 SPTBN5Q9NRC6 3674 aaKnown RBP-0.19□□□□□ -2.44
SUB1-204ENST00000504016 FAM208AQ9UK61 1670 aaKnown RBP-0.19□□□□□ -2.44
SUB1-204ENST00000504016 STARD9Q9P2P6 4700 aa-0.19□□□□□ -2.44
SUB1-204ENST00000504016 CHD7Q9P2D1 2997 aa-0.19□□□□□ -2.44
SUB1-204ENST00000504016 DNAH2Q9P225 4427 aa-0.19□□□□□ -2.44
SUB1-204ENST00000504016 C5orf42Q9H799 3197 aa-0.2□□□□□ -2.44
SUB1-204ENST00000504016 DNAH8Q96JB1 4490 aa-0.2□□□□□ -2.44
SUB1-204ENST00000504016 MT1HP80294 61 aa-0.2□□□□□ -2.44
SUB1-204ENST00000504016 CELSR3Q9NYQ7 3312 aa-0.2□□□□□ -2.44
SUB1-204ENST00000504016 RELNP78509 3460 aa-0.21□□□□□ -2.44
SUB1-204ENST00000504016 MUC17Q685J3 4493 aa-0.21□□□□□ -2.44
SUB1-204ENST00000504016 ADGRG4Q8IZF6 3080 aa-0.21□□□□□ -2.44
SUB1-204ENST00000504016 MYO9AB2RTY4 2548 aa-0.22□□□□□ -2.44
SUB1-204ENST00000504016 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.22□□□□□ -2.44
SUB1-204ENST00000504016 NDUFA1O15239 70 aa-0.22□□□□□ -2.44
SUB1-204ENST00000504016 KRTAP19-5Q3LI72 72 aa-0.22□□□□□ -2.44
SUB1-204ENST00000504016 MROH2AA6NES4 1674 aa-0.22□□□□□ -2.44
SUB1-204ENST00000504016 UBR4Q5T4S7 5183 aa-0.22□□□□□ -2.44
SUB1-204ENST00000504016 NRXN3Q9Y4C0 1643 aa-0.23□□□□□ -2.45
SUB1-204ENST00000504016 POLR2KP53803 58 aaKnown RBP-0.23□□□□□ -2.45
SUB1-204ENST00000504016 SMR3BP02814 79 aaPredicted RBP-0.24□□□□□ -2.45
SUB1-204ENST00000504016 TOMM5Q8N4H5 51 aa-0.24□□□□□ -2.45
SUB1-204ENST00000504016 DOPEY1Q5JWR5 2465 aa-0.24□□□□□ -2.45
SUB1-204ENST00000504016 MT4P47944 62 aa-0.25□□□□□ -2.45
SUB1-204ENST00000504016 CFAP46Q8IYW2 2715 aa-0.25□□□□□ -2.45
SUB1-204ENST00000504016 CMYA5Q8N3K9 4069 aa-0.25□□□□□ -2.45
SUB1-204ENST00000504016 DDX60Q8IY21 1712 aaKnown RBP-0.26□□□□□ -2.45
SUB1-204ENST00000504016 DNAH7Q8WXX0 4024 aa-0.27□□□□□ -2.45
SUB1-204ENST00000504016 ITPR2Q14571 2701 aa-0.28□□□□□ -2.45
SUB1-204ENST00000504016 USH2AO75445 5202 aa-0.28□□□□□ -2.45
SUB1-204ENST00000504016 KRTAP20-2Q3LI61 65 aa-0.28□□□□□ -2.45
SUB1-204ENST00000504016 MGAQ8IWI9 3026 aa-0.28□□□□□ -2.45
SUB1-204ENST00000504016 CLTCL1P53675 1640 aa-0.28□□□□□ -2.45
SUB1-204ENST00000504016 NIPBLQ6KC79 2804 aaeCLIP-0.28□□□□□ -2.45
SUB1-204ENST00000504016 CEP295Q9C0D2 2601 aa-0.29□□□□□ -2.46
SUB1-204ENST00000504016 IQGAP1P46940 1657 aa-0.3□□□□□ -2.46
SUB1-204ENST00000504016 MT1EP04732 61 aa-0.3□□□□□ -2.46
SUB1-204ENST00000504016 CRYBG3Q68DQ2 2970 aa-0.3□□□□□ -2.46
SUB1-204ENST00000504016 SRCAPQ6ZRS2 3230 aa-0.3□□□□□ -2.46
SUB1-204ENST00000504016 EPPK1P58107 5090 aaKnown RBP-0.31□□□□□ -2.46
SUB1-204ENST00000504016 NEBP20929 6669 aa-0.31□□□□□ -2.46
SUB1-204ENST00000504016 IQGAP2Q13576 1575 aa-0.31□□□□□ -2.46
SUB1-204ENST00000504016 HERC2O95714 4834 aa-0.31□□□□□ -2.46
SUB1-204ENST00000504016 TRRAPQ9Y4A5 3859 aa-0.32□□□□□ -2.46
SUB1-204ENST00000504016 CSMD1Q96PZ7 3565 aa-0.32□□□□□ -2.46
SUB1-204ENST00000504016 NFAT5O94916 1531 aa-0.33□□□□□ -2.46
SUB1-204ENST00000504016 PLECQ15149 4684 aaKnown RBP-0.33□□□□□ -2.46
SUB1-204ENST00000504016 LAMA3Q16787 3333 aa-0.33□□□□□ -2.46
SUB1-204ENST00000504016 MT1XP80297 61 aa-0.33□□□□□ -2.46
SUB1-204ENST00000504016 LEAP2Q969E1 77 aa-0.33□□□□□ -2.46
SUB1-204ENST00000504016 LAMA2P24043 3122 aaKnown RBP-0.33□□□□□ -2.46
SUB1-204ENST00000504016 RYR1P21817 5038 aa-0.33□□□□□ -2.46
SUB1-204ENST00000504016 HYDINQ4G0P3 5121 aa-0.34□□□□□ -2.46
SUB1-204ENST00000504016 RYR3Q15413 4870 aa-0.34□□□□□ -2.46
SUB1-204ENST00000504016 MT1LQ93083 61 aa-0.34□□□□□ -2.46
SUB1-204ENST00000504016 DNHD1Q96M86 4753 aa-0.34□□□□□ -2.46
SUB1-204ENST00000504016 DMXL2Q8TDJ6 3036 aa-0.35□□□□□ -2.47
SUB1-204ENST00000504016 CFAP54Q96N23 3096 aa-0.36□□□□□ -2.47
SUB1-204ENST00000504016 ZFHX4Q86UP3 3567 aa-0.36□□□□□ -2.47
SUB1-204ENST00000504016 BIRC6Q9NR09 4857 aa-0.36□□□□□ -2.47
SUB1-204ENST00000504016 DEFB136Q30KP8 78 aa-0.36□□□□□ -2.47
SUB1-204ENST00000504016 DNAH17Q9UFH2 4485 aa-0.37□□□□□ -2.47
SUB1-204ENST00000504016 DYNC1H1Q14204 4646 aaKnown RBP-0.37□□□□□ -2.47
SUB1-204ENST00000504016 PRUNE2Q8WUY3 3088 aa-0.38□□□□□ -2.47
SUB1-204ENST00000504016 TOMM7Q9P0U1 55 aa-0.38□□□□□ -2.47
SUB1-204ENST00000504016 SAMD9LQ8IVG5 1584 aa-0.39□□□□□ -2.47
SUB1-204ENST00000504016 DNAH10Q8IVF4 4471 aa-0.39□□□□□ -2.47
SUB1-204ENST00000504016 KIAA1109Q2LD37 5005 aa-0.39□□□□□ -2.47
SUB1-204ENST00000504016 ATP7AQ04656 1500 aa-0.39□□□□□ -2.47
SUB1-204ENST00000504016 RNF213Q63HN8 5207 aa-0.4□□□□□ -2.47
SUB1-204ENST00000504016 TLN1Q9Y490 2541 aaKnown RBP-0.4□□□□□ -2.47
SUB1-204ENST00000504016 MT1HL1P0DM35 61 aa-0.4□□□□□ -2.47
SUB1-204ENST00000504016 SMG1Q96Q15 3661 aaKnown RBP-0.41□□□□□ -2.47
SUB1-204ENST00000504016 LINC01590Q5TEZ4 76 aa-0.41□□□□□ -2.48
SUB1-204ENST00000504016 EYSQ5T1H1 3165 aa-0.42□□□□□ -2.48
SUB1-204ENST00000504016 RYR2Q92736 4967 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms