RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 PKHD1L1Q86WI1 4243 aa5.45□□□□□ -1.54
PDLIM5-207ENST00000503974 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
PDLIM5-207ENST00000503974 SRRM2Q9UQ35 2752 aaKnown RBP5.44□□□□□ -1.54
PDLIM5-207ENST00000503974 H0YAA0 97 aa5.43□□□□□ -1.54
PDLIM5-207ENST00000503974 MRPL34Q9BQ48 92 aaKnown RBP5.43□□□□□ -1.54
PDLIM5-207ENST00000503974 KRTAP1-4P0C5Y4 121 aa5.41□□□□□ -1.54
PDLIM5-207ENST00000503974 LCE2BO14633 110 aa5.39□□□□□ -1.55
PDLIM5-207ENST00000503974 TPRXLQ17RH7 258 aa5.37□□□□□ -1.55
PDLIM5-207ENST00000503974 FLG2Q5D862 2391 aaPredicted RBP5.37□□□□□ -1.55
PDLIM5-207ENST00000503974 A0A1B0GVX0 72 aa5.36□□□□□ -1.55
PDLIM5-207ENST00000503974 FAT3Q8TDW7 4589 aa5.36□□□□□ -1.55
PDLIM5-207ENST00000503974 PCLOQ9Y6V0 5065 aa5.35□□□□□ -1.55
PDLIM5-207ENST00000503974 SPRR1BP22528 89 aa5.35□□□□□ -1.55
PDLIM5-207ENST00000503974 MYCBP2O75592 4640 aa5.35□□□□□ -1.55
PDLIM5-207ENST00000503974 LRP1Q07954 4544 aaKnown RBP5.34□□□□□ -1.55
PDLIM5-207ENST00000503974 MT1HL1P0DM35 61 aa5.33□□□□□ -1.56
PDLIM5-207ENST00000503974 KRTAP10-8P60410 259 aa5.32□□□□□ -1.56
PDLIM5-207ENST00000503974 ANAPC11Q9NYG5 84 aa5.32□□□□□ -1.56
PDLIM5-207ENST00000503974 KRTAP13-2Q52LG2 175 aa5.32□□□□□ -1.56
PDLIM5-207ENST00000503974 TNXBP22105 4242 aa5.28□□□□□ -1.56
PDLIM5-207ENST00000503974 TYMSOSQ8TAI1 123 aa5.27□□□□□ -1.57
PDLIM5-207ENST00000503974 A0A1B0GU33 70 aa5.25□□□□□ -1.57
PDLIM5-207ENST00000503974 IGKV2-30P06310 120 aa5.25□□□□□ -1.57
PDLIM5-207ENST00000503974 DMBT1Q9UGM3 2413 aaPredicted RBP5.22□□□□□ -1.57
PDLIM5-207ENST00000503974 H1FX-AS1Q4G0G2 97 aa5.22□□□□□ -1.57
PDLIM5-207ENST00000503974 CAMK2N1Q7Z7J9 78 aa5.2□□□□□ -1.58
PDLIM5-207ENST00000503974 RPS29P62273 56 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-207ENST00000503974 IGKV2D-30A0A075B6S6 120 aa5.19□□□□□ -1.58
PDLIM5-207ENST00000503974 C10orf95Q9H7T3 257 aa5.19□□□□□ -1.58
PDLIM5-207ENST00000503974 SPINK1P00995 79 aa5.17□□□□□ -1.58
PDLIM5-207ENST00000503974 HERC1Q15751 4861 aa5.12□□□□□ -1.59
PDLIM5-207ENST00000503974 HMCN2Q8NDA2 5059 aa5.07□□□□□ -1.6
PDLIM5-207ENST00000503974 RPL37P61927 97 aaKnown RBP5.06□□□□□ -1.6
PDLIM5-207ENST00000503974 LCE2CQ5TA81 110 aa5.03□□□□□ -1.6
PDLIM5-207ENST00000503974 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.6
PDLIM5-207ENST00000503974 LCE2AQ5TA79 106 aaPredicted RBP5□□□□□ -1.61
PDLIM5-207ENST00000503974 LPAP08519 4548 aa4.94□□□□□ -1.62
PDLIM5-207ENST00000503974 PLAC4Q8WY50 150 aa4.93□□□□□ -1.62
PDLIM5-207ENST00000503974 PRO2289Q9P1D8 64 aa4.93□□□□□ -1.62
PDLIM5-207ENST00000503974 LRP2P98164 4655 aa4.93□□□□□ -1.62
PDLIM5-207ENST00000503974 XP32Q5T750 250 aa4.91□□□□□ -1.62
PDLIM5-207ENST00000503974 C9orf92A6NGG3 77 aa4.9□□□□□ -1.62
PDLIM5-207ENST00000503974 UBR4Q5T4S7 5183 aa4.87□□□□□ -1.63
PDLIM5-207ENST00000503974 MUC17Q685J3 4493 aa4.85□□□□□ -1.63
PDLIM5-207ENST00000503974 LORP23490 312 aaPredicted RBP4.85□□□□□ -1.63
PDLIM5-207ENST00000503974 KRTAP13-4Q3LI77 160 aa4.84□□□□□ -1.64
PDLIM5-207ENST00000503974 S4R3F8 94 aa4.84□□□□□ -1.64
PDLIM5-207ENST00000503974 A0A0D9SG42 100 aa4.83□□□□□ -1.64
PDLIM5-207ENST00000503974 KRTAP3-1Q9BYR8 98 aa4.81□□□□□ -1.64
PDLIM5-207ENST00000503974 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
PDLIM5-207ENST00000503974 R4GN34 69 aa4.77□□□□□ -1.65
PDLIM5-207ENST00000503974 RNF213Q63HN8 5207 aa4.77□□□□□ -1.65
PDLIM5-207ENST00000503974 KRTAP12-2P59991 146 aa4.75□□□□□ -1.65
PDLIM5-207ENST00000503974 KRTAP4-1Q9BYQ7 146 aa4.75□□□□□ -1.65
PDLIM5-207ENST00000503974 MUC2Q02817 5179 aa4.69□□□□□ -1.66
PDLIM5-207ENST00000503974 KRTAP12-1P59990 96 aa4.67□□□□□ -1.66
PDLIM5-207ENST00000503974 INE1O15225 51 aa4.65□□□□□ -1.67
PDLIM5-207ENST00000503974 KRTAP19-2Q3LHN2 52 aa4.63□□□□□ -1.67
PDLIM5-207ENST00000503974 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
PDLIM5-207ENST00000503974 FAT4Q6V0I7 4981 aa4.58□□□□□ -1.68
PDLIM5-207ENST00000503974 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
PDLIM5-207ENST00000503974 MT1HP80294 61 aa4.5□□□□□ -1.69
PDLIM5-207ENST00000503974 FLGP20930 4061 aaPredicted RBP4.47□□□□□ -1.69
PDLIM5-207ENST00000503974 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
PDLIM5-207ENST00000503974 M0QZ58 72 aa4.41□□□□□ -1.7
PDLIM5-207ENST00000503974 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.71
PDLIM5-207ENST00000503974 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.71
PDLIM5-207ENST00000503974 M0R2T5 61 aa4.37□□□□□ -1.71
PDLIM5-207ENST00000503974 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
PDLIM5-207ENST00000503974 MT2AP02795 61 aa4.26□□□□□ -1.73
PDLIM5-207ENST00000503974 MT1FP04733 61 aa4.23□□□□□ -1.73
PDLIM5-207ENST00000503974 KRTAP10-10P60014 251 aa4.17□□□□□ -1.74
PDLIM5-207ENST00000503974 KRTAP9-3Q9BYQ3 159 aa4.17□□□□□ -1.74
PDLIM5-207ENST00000503974 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.75
PDLIM5-207ENST00000503974 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
PDLIM5-207ENST00000503974 KRTAP4-8Q9BYQ9 185 aa4.07□□□□□ -1.76
PDLIM5-207ENST00000503974 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
PDLIM5-207ENST00000503974 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.05□□□□□ -1.76
PDLIM5-207ENST00000503974 USH2AO75445 5202 aa4.03□□□□□ -1.76
PDLIM5-207ENST00000503974 KRTAP9-6A0A140TA67 174 aa4.02□□□□□ -1.77
PDLIM5-207ENST00000503974 KRTAP19-8Q3LI54 63 aa4.01□□□□□ -1.77
PDLIM5-207ENST00000503974 MT1BP07438 61 aa3.96□□□□□ -1.77
PDLIM5-207ENST00000503974 CRCT1Q9UGL9 99 aa3.96□□□□□ -1.78
PDLIM5-207ENST00000503974 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
PDLIM5-207ENST00000503974 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
PDLIM5-207ENST00000503974 TNP1P09430 55 aa3.93□□□□□ -1.78
PDLIM5-207ENST00000503974 FSIP2Q5CZC0 6907 aa3.91□□□□□ -1.78
PDLIM5-207ENST00000503974 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
PDLIM5-207ENST00000503974 LCE3BQ5TA77 95 aa3.86□□□□□ -1.79
PDLIM5-207ENST00000503974 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
PDLIM5-207ENST00000503974 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
PDLIM5-207ENST00000503974 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
PDLIM5-207ENST00000503974 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
PDLIM5-207ENST00000503974 MT1XP80297 61 aa3.77□□□□□ -1.81
PDLIM5-207ENST00000503974 KRTAP4-8A0A0G2JLE6 195 aa3.72□□□□□ -1.81
PDLIM5-207ENST00000503974 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
PDLIM5-207ENST00000503974 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
PDLIM5-207ENST00000503974 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
PDLIM5-207ENST00000503974 LCE1DQ5T752 114 aa3.61□□□□□ -1.83
PDLIM5-207ENST00000503974 KRTAP9-7A8MTY7 169 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms