RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SPRR2GQ9BYE4 73 aa5.38□□□□□ -1.55
MED28-203ENST00000503945 TRAV22A0A0B4J277 110 aa5.37□□□□□ -1.55
MED28-203ENST00000503945 LOC101927531A0A1B0GV80 90 aa5.37□□□□□ -1.55
MED28-203ENST00000503945 A6NN06 94 aa5.37□□□□□ -1.55
MED28-203ENST00000503945 KLKP1Q107X0 134 aa5.36□□□□□ -1.55
MED28-203ENST00000503945 HIST1H4AP62805 103 aaKnown RBP5.35□□□□□ -1.55
MED28-203ENST00000503945 UQCRQO14949 82 aa5.34□□□□□ -1.55
MED28-203ENST00000503945 KRTAP19-8Q3LI54 63 aa5.34□□□□□ -1.55
MED28-203ENST00000503945 MT1BP07438 61 aa5.33□□□□□ -1.56
MED28-203ENST00000503945 KRTAP20-1Q3LI63 56 aa5.33□□□□□ -1.56
MED28-203ENST00000503945 ATP5EP2Q5VTU8 51 aa5.33□□□□□ -1.56
MED28-203ENST00000503945 FAM240AA0A1B0GVK7 77 aa5.32□□□□□ -1.56
MED28-203ENST00000503945 ATOX1O00244 68 aa5.32□□□□□ -1.56
MED28-203ENST00000503945 IMUPQ9GZP8 106 aa5.32□□□□□ -1.56
MED28-203ENST00000503945 CRIPTQ9P021 101 aa5.32□□□□□ -1.56
MED28-203ENST00000503945 A0A087WVE0 104 aa5.31□□□□□ -1.56
MED28-203ENST00000503945 NDUFC1O43677 76 aa5.31□□□□□ -1.56
MED28-203ENST00000503945 H0Y9P7 68 aa5.29□□□□□ -1.56
MED28-203ENST00000503945 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
MED28-203ENST00000503945 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
MED28-203ENST00000503945 MDN1Q9NU22 5596 aa5.26□□□□□ -1.57
MED28-203ENST00000503945 KRTAP10-5P60370 271 aa5.25□□□□□ -1.57
MED28-203ENST00000503945 LINC00643Q86TS7 51 aa5.25□□□□□ -1.57
MED28-203ENST00000503945 A8MUN3 132 aa5.24□□□□□ -1.57
MED28-203ENST00000503945 KMT2DO14686 5537 aa5.23□□□□□ -1.57
MED28-203ENST00000503945 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
MED28-203ENST00000503945 KRTAP5-9P26371 169 aa5.23□□□□□ -1.57
MED28-203ENST00000503945 H0YAA0 97 aa5.22□□□□□ -1.57
MED28-203ENST00000503945 LINC00208Q96KT6 92 aa5.22□□□□□ -1.57
MED28-203ENST00000503945 MP68P56378 58 aa5.21□□□□□ -1.58
MED28-203ENST00000503945 A0A1B0GV90 55 aa5.2□□□□□ -1.58
MED28-203ENST00000503945 ADM2Q7Z4H4 148 aa5.19□□□□□ -1.58
MED28-203ENST00000503945 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
MED28-203ENST00000503945 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
MED28-203ENST00000503945 OCR1Q9BZK8 76 aa5.15□□□□□ -1.59
MED28-203ENST00000503945 KRTAP2-3P0C7H8 128 aa5.13□□□□□ -1.59
MED28-203ENST00000503945 KRTAP2-4Q9BYR9 128 aa5.13□□□□□ -1.59
MED28-203ENST00000503945 SCGB1A1P11684 91 aa5.11□□□□□ -1.59
MED28-203ENST00000503945 PLAC4Q8WY50 150 aa5.11□□□□□ -1.59
MED28-203ENST00000503945 H3BPC8 53 aa5.1□□□□□ -1.59
MED28-203ENST00000503945 J3QR89 54 aa5.1□□□□□ -1.59
MED28-203ENST00000503945 PRO2289Q9P1D8 64 aa5.1□□□□□ -1.59
MED28-203ENST00000503945 C20orf197Q8N268 126 aa5.08□□□□□ -1.6
MED28-203ENST00000503945 R4GN34 69 aa5.08□□□□□ -1.6
MED28-203ENST00000503945 LCE1DQ5T752 114 aa5.06□□□□□ -1.6
MED28-203ENST00000503945 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
MED28-203ENST00000503945 DMAC1Q96GE9 116 aa5.03□□□□□ -1.6
MED28-203ENST00000503945 P0C880 135 aa5.02□□□□□ -1.61
MED28-203ENST00000503945 SPRR2EP22531 72 aa5.02□□□□□ -1.61
MED28-203ENST00000503945 SPRR2BP35325 72 aa5.02□□□□□ -1.61
MED28-203ENST00000503945 SPRR2AP35326 72 aa5.02□□□□□ -1.61
MED28-203ENST00000503945 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
MED28-203ENST00000503945 M0QZ58 72 aa5.01□□□□□ -1.61
MED28-203ENST00000503945 MT1XP80297 61 aa5□□□□□ -1.61
MED28-203ENST00000503945 ACYP2P14621 99 aa4.97□□□□□ -1.61
MED28-203ENST00000503945 TRAV7A0A075B6U4 112 aa4.96□□□□□ -1.62
MED28-203ENST00000503945 LINC01554Q52M75 96 aa4.96□□□□□ -1.62
MED28-203ENST00000503945 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
MED28-203ENST00000503945 KRTAP2-1Q9BYU5 128 aa4.96□□□□□ -1.62
MED28-203ENST00000503945 SPTSSBQ8NFR3 76 aa4.94□□□□□ -1.62
MED28-203ENST00000503945 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
MED28-203ENST00000503945 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
MED28-203ENST00000503945 SMIM20Q8N5G0 67 aa4.92□□□□□ -1.62
MED28-203ENST00000503945 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
MED28-203ENST00000503945 KRTAP12-2P59991 146 aa4.9□□□□□ -1.63
MED28-203ENST00000503945 CHKB-CPT1BH3BT56 60 aa4.87□□□□□ -1.63
MED28-203ENST00000503945 K7ERU9 68 aa4.87□□□□□ -1.63
MED28-203ENST00000503945 MT-ATP8P03928 68 aa4.87□□□□□ -1.63
MED28-203ENST00000503945 SPRR2DP22532 72 aa4.85□□□□□ -1.63
MED28-203ENST00000503945 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
MED28-203ENST00000503945 SNURFQ9Y675 71 aa4.79□□□□□ -1.64
MED28-203ENST00000503945 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
MED28-203ENST00000503945 KRTAP10-7P60409 375 aaPredicted RBP4.77□□□□□ -1.65
MED28-203ENST00000503945 KRTAP10-12P60413 245 aa4.76□□□□□ -1.65
MED28-203ENST00000503945 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
MED28-203ENST00000503945 SPANXA2-OT1Q8N9U9 137 aa4.74□□□□□ -1.65
MED28-203ENST00000503945 KRTAP4-11Q9BYQ6 195 aa4.73□□□□□ -1.65
MED28-203ENST00000503945 SERP2Q8N6R1 65 aa4.7□□□□□ -1.66
MED28-203ENST00000503945 CAMK2N1Q7Z7J9 78 aa4.67□□□□□ -1.66
MED28-203ENST00000503945 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
MED28-203ENST00000503945 SEC61GP60059 68 aa4.65□□□□□ -1.67
MED28-203ENST00000503945 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
MED28-203ENST00000503945 SERP1Q9Y6X1 66 aa4.63□□□□□ -1.67
MED28-203ENST00000503945 COA5Q86WW8 74 aa4.6□□□□□ -1.67
MED28-203ENST00000503945 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
MED28-203ENST00000503945 A0A0D9SG42 100 aa4.56□□□□□ -1.68
MED28-203ENST00000503945 A0A1B0GU33 70 aa4.54□□□□□ -1.68
MED28-203ENST00000503945 COX7CP15954 63 aa4.52□□□□□ -1.69
MED28-203ENST00000503945 SPATA8Q6RVD6 105 aa4.52□□□□□ -1.69
MED28-203ENST00000503945 SPINT4Q6UDR6 99 aa4.52□□□□□ -1.69
MED28-203ENST00000503945 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
MED28-203ENST00000503945 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
MED28-203ENST00000503945 H7BZZ5 65 aa4.45□□□□□ -1.7
MED28-203ENST00000503945 CYSTM1Q9H1C7 97 aa4.44□□□□□ -1.7
MED28-203ENST00000503945 MT1EP04732 61 aa4.43□□□□□ -1.7
MED28-203ENST00000503945 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
MED28-203ENST00000503945 KRTAP12-1P59990 96 aa4.42□□□□□ -1.7
MED28-203ENST00000503945 SMIM26A0A096LP01 95 aa4.41□□□□□ -1.7
MED28-203ENST00000503945 A0A1B0GU69 56 aa4.41□□□□□ -1.7
MED28-203ENST00000503945 ANAPC13Q9BS18 74 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms