RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 APOBP04114 4563 aaKnown RBP3.55□□□□□ -1.84
LINC00939-201ENST00000502479 M0QZ58 72 aa3.54□□□□□ -1.84
LINC00939-201ENST00000502479 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
LINC00939-201ENST00000502479 DYNC1H1Q14204 4646 aaKnown RBP3.53□□□□□ -1.84
LINC00939-201ENST00000502479 SEC61BP60468 96 aaKnown RBP3.53□□□□□ -1.84
LINC00939-201ENST00000502479 Q5VSD8 79 aa3.51□□□□□ -1.85
LINC00939-201ENST00000502479 LRP1BQ9NZR2 4599 aa3.51□□□□□ -1.85
LINC00939-201ENST00000502479 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
LINC00939-201ENST00000502479 HSPG2P98160 4391 aa3.49□□□□□ -1.85
LINC00939-201ENST00000502479 KMT2CQ8NEZ4 4911 aaKnown RBP3.48□□□□□ -1.85
LINC00939-201ENST00000502479 NOTCH1P46531 2555 aa3.48□□□□□ -1.85
LINC00939-201ENST00000502479 TNXBP22105 4242 aa3.47□□□□□ -1.85
LINC00939-201ENST00000502479 RYR3Q15413 4870 aa3.46□□□□□ -1.86
LINC00939-201ENST00000502479 KRTAP10-4P60372 401 aaPredicted RBP3.44□□□□□ -1.86
LINC00939-201ENST00000502479 KRTAP10-8P60410 259 aa3.43□□□□□ -1.86
LINC00939-201ENST00000502479 ADM2Q7Z4H4 148 aa3.43□□□□□ -1.86
LINC00939-201ENST00000502479 TENM2Q9NT68 2774 aa3.41□□□□□ -1.86
LINC00939-201ENST00000502479 A8MU10 97 aa3.39□□□□□ -1.87
LINC00939-201ENST00000502479 XP32Q5T750 250 aa3.39□□□□□ -1.87
LINC00939-201ENST00000502479 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
LINC00939-201ENST00000502479 C10orf95Q9H7T3 257 aa3.38□□□□□ -1.87
LINC00939-201ENST00000502479 FAT1Q14517 4588 aa3.36□□□□□ -1.87
LINC00939-201ENST00000502479 TNP1P09430 55 aa3.36□□□□□ -1.87
LINC00939-201ENST00000502479 H0YAA0 97 aa3.34□□□□□ -1.87
LINC00939-201ENST00000502479 KRTAP3-1Q9BYR8 98 aa3.33□□□□□ -1.88
LINC00939-201ENST00000502479 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
LINC00939-201ENST00000502479 SRRM2Q9UQ35 2752 aaKnown RBP3.3□□□□□ -1.88
LINC00939-201ENST00000502479 TGP01266 2768 aa3.3□□□□□ -1.88
LINC00939-201ENST00000502479 RYR1P21817 5038 aa3.29□□□□□ -1.88
LINC00939-201ENST00000502479 EPPK1P58107 5090 aaKnown RBP3.26□□□□□ -1.89
LINC00939-201ENST00000502479 P0C880 135 aa3.23□□□□□ -1.89
LINC00939-201ENST00000502479 MT1HL1P0DM35 61 aa3.22□□□□□ -1.89
LINC00939-201ENST00000502479 KRTAP17-1Q9BYP8 105 aa3.2□□□□□ -1.9
LINC00939-201ENST00000502479 KRTAP10-6P60371 365 aaPredicted RBP3.2□□□□□ -1.9
LINC00939-201ENST00000502479 LRP1Q07954 4544 aaKnown RBP3.19□□□□□ -1.9
LINC00939-201ENST00000502479 MUC17Q685J3 4493 aa3.18□□□□□ -1.9
LINC00939-201ENST00000502479 ABCA13Q86UQ4 5058 aa3.16□□□□□ -1.9
LINC00939-201ENST00000502479 HERC2O95714 4834 aa3.13□□□□□ -1.91
LINC00939-201ENST00000502479 MYCBP2O75592 4640 aa3.12□□□□□ -1.91
LINC00939-201ENST00000502479 KRTAP12-1P59990 96 aa3.1□□□□□ -1.91
LINC00939-201ENST00000502479 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
LINC00939-201ENST00000502479 KRTAP13-4Q3LI77 160 aa3.1□□□□□ -1.91
LINC00939-201ENST00000502479 BIRC6Q9NR09 4857 aa3.09□□□□□ -1.92
LINC00939-201ENST00000502479 KIAA1109Q2LD37 5005 aa3.08□□□□□ -1.92
LINC00939-201ENST00000502479 LPAP08519 4548 aa3.06□□□□□ -1.92
LINC00939-201ENST00000502479 PRO2289Q9P1D8 64 aa3.06□□□□□ -1.92
LINC00939-201ENST00000502479 KRTAP23-1A1A580 65 aa3.02□□□□□ -1.93
LINC00939-201ENST00000502479 FLGP20930 4061 aaPredicted RBP3□□□□□ -1.93
LINC00939-201ENST00000502479 LCE2BO14633 110 aa2.98□□□□□ -1.93
LINC00939-201ENST00000502479 PCLOQ9Y6V0 5065 aa2.98□□□□□ -1.93
LINC00939-201ENST00000502479 KRTAP10-10P60014 251 aa2.97□□□□□ -1.93
LINC00939-201ENST00000502479 KRTAP15-1Q3LI76 137 aa2.94□□□□□ -1.94
LINC00939-201ENST00000502479 HMCN2Q8NDA2 5059 aa2.94□□□□□ -1.94
LINC00939-201ENST00000502479 KRTAP4-5Q9BYR2 181 aa2.93□□□□□ -1.94
LINC00939-201ENST00000502479 LRP2P98164 4655 aa2.92□□□□□ -1.94
LINC00939-201ENST00000502479 INE1O15225 51 aa2.92□□□□□ -1.94
LINC00939-201ENST00000502479 HERC1Q15751 4861 aa2.9□□□□□ -1.94
LINC00939-201ENST00000502479 KRTAP19-2Q3LHN2 52 aa2.89□□□□□ -1.95
LINC00939-201ENST00000502479 KRTAP4-1Q9BYQ7 146 aa2.87□□□□□ -1.95
LINC00939-201ENST00000502479 LCE2AQ5TA79 106 aaPredicted RBP2.84□□□□□ -1.95
LINC00939-201ENST00000502479 LORP23490 312 aaPredicted RBP2.82□□□□□ -1.96
LINC00939-201ENST00000502479 LCE2CQ5TA81 110 aa2.82□□□□□ -1.96
LINC00939-201ENST00000502479 SPRR2GQ9BYE4 73 aa2.81□□□□□ -1.96
LINC00939-201ENST00000502479 MT1HP80294 61 aa2.75□□□□□ -1.97
LINC00939-201ENST00000502479 MUC2Q02817 5179 aa2.74□□□□□ -1.97
LINC00939-201ENST00000502479 KRTAP19-8Q3LI54 63 aa2.69□□□□□ -1.98
LINC00939-201ENST00000502479 RNF213Q63HN8 5207 aa2.68□□□□□ -1.98
LINC00939-201ENST00000502479 MT2AP02795 61 aa2.67□□□□□ -1.98
LINC00939-201ENST00000502479 UBR4Q5T4S7 5183 aa2.66□□□□□ -1.98
LINC00939-201ENST00000502479 CRCT1Q9UGL9 99 aa2.65□□□□□ -1.98
LINC00939-201ENST00000502479 KRTAP10-12P60413 245 aa2.64□□□□□ -1.99
LINC00939-201ENST00000502479 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
LINC00939-201ENST00000502479 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
LINC00939-201ENST00000502479 KRTAP19-4Q3LI73 84 aa2.63□□□□□ -1.99
LINC00939-201ENST00000502479 KRTAP19-1Q8IUB9 90 aa2.63□□□□□ -1.99
LINC00939-201ENST00000502479 MT1FP04733 61 aa2.62□□□□□ -1.99
LINC00939-201ENST00000502479 KRTAP9-8Q9BYQ0 159 aa2.6□□□□□ -1.99
LINC00939-201ENST00000502479 FAT4Q6V0I7 4981 aa2.59□□□□□ -2
LINC00939-201ENST00000502479 KRTAP8-1Q8IUC2 63 aa2.58□□□□□ -2
LINC00939-201ENST00000502479 KRTAP12-3P60328 96 aa2.57□□□□□ -2
LINC00939-201ENST00000502479 KRTAP10-5P60370 271 aa2.55□□□□□ -2
LINC00939-201ENST00000502479 MT1BP07438 61 aa2.53□□□□□ -2
LINC00939-201ENST00000502479 MT1XP80297 61 aa2.53□□□□□ -2
LINC00939-201ENST00000502479 KRTAP9-3Q9BYQ3 159 aa2.52□□□□□ -2.01
LINC00939-201ENST00000502479 LCE3CQ5T5A8 94 aa2.43□□□□□ -2.02
LINC00939-201ENST00000502479 KRTAP10-7P60409 375 aaPredicted RBP2.42□□□□□ -2.02
LINC00939-201ENST00000502479 LOC100996750A0A140TA64 210 aa2.41□□□□□ -2.02
LINC00939-201ENST00000502479 KRTAP4-6Q9BYQ5 205 aa2.41□□□□□ -2.02
LINC00939-201ENST00000502479 KRTAP19-5Q3LI72 72 aa2.4□□□□□ -2.02
LINC00939-201ENST00000502479 SSPOA2VEC9 5147 aa2.33□□□□□ -2.04
LINC00939-201ENST00000502479 USH2AO75445 5202 aa2.31□□□□□ -2.04
LINC00939-201ENST00000502479 KRTAP19-6Q3LI70 58 aa2.29□□□□□ -2.04
LINC00939-201ENST00000502479 MT1EP04732 61 aa2.26□□□□□ -2.05
LINC00939-201ENST00000502479 KRTAP4-8Q9BYQ9 185 aa2.26□□□□□ -2.05
LINC00939-201ENST00000502479 LCE3BQ5TA77 95 aa2.24□□□□□ -2.05
LINC00939-201ENST00000502479 MT1LQ93083 61 aa2.23□□□□□ -2.05
LINC00939-201ENST00000502479 KRTAP9-2Q9BYQ4 174 aa2.2□□□□□ -2.06
LINC00939-201ENST00000502479 KRTAP19-7Q3SYF9 63 aa2.19□□□□□ -2.06
LINC00939-201ENST00000502479 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
LINC00939-201ENST00000502479 MT1GP13640 62 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms