RNA–Protein interactions for RNA: ENST00000502463.7

CASC11-201, Transcript of cancer susceptibility 11, humanhuman

TSL 2 BASIC

Gene CASC11, Length 3,301 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC11-201ENST00000502463 KRTAP1-4P0C5Y4 121 aa3.52□□□□□ -1.85
CASC11-201ENST00000502463 TYMSOSQ8TAI1 123 aa3.51□□□□□ -1.85
CASC11-201ENST00000502463 A8MUU9 505 aa3.5□□□□□ -1.85
CASC11-201ENST00000502463 LCE2DQ5TA82 110 aaPredicted RBP3.5□□□□□ -1.85
CASC11-201ENST00000502463 HERC1Q15751 4861 aa3.5□□□□□ -1.85
CASC11-201ENST00000502463 LINC00304Q8N9R0 145 aa3.49□□□□□ -1.85
CASC11-201ENST00000502463 KRTAP25-1Q3LHN0 102 aa3.48□□□□□ -1.85
CASC11-201ENST00000502463 SMR3BP02814 79 aaPredicted RBP3.47□□□□□ -1.85
CASC11-201ENST00000502463 CRIPTQ9P021 101 aa3.46□□□□□ -1.86
CASC11-201ENST00000502463 A0A1B0GU33 70 aa3.45□□□□□ -1.86
CASC11-201ENST00000502463 FLG2Q5D862 2391 aaPredicted RBP3.45□□□□□ -1.86
CASC11-201ENST00000502463 KRTAP3-1Q9BYR8 98 aa3.44□□□□□ -1.86
CASC11-201ENST00000502463 H1FX-AS1Q4G0G2 97 aa3.44□□□□□ -1.86
CASC11-201ENST00000502463 ROMO1P60602 79 aa3.43□□□□□ -1.86
CASC11-201ENST00000502463 C9orf92A6NGG3 77 aa3.43□□□□□ -1.86
CASC11-201ENST00000502463 MT1HL1P0DM35 61 aa3.42□□□□□ -1.86
CASC11-201ENST00000502463 SEC61BP60468 96 aaKnown RBP3.41□□□□□ -1.86
CASC11-201ENST00000502463 Q5VSD8 79 aa3.38□□□□□ -1.87
CASC11-201ENST00000502463 COX6B2Q6YFQ2 88 aa3.38□□□□□ -1.87
CASC11-201ENST00000502463 P0C880 135 aa3.37□□□□□ -1.87
CASC11-201ENST00000502463 KRTAP3-3Q9BYR6 98 aa3.37□□□□□ -1.87
CASC11-201ENST00000502463 KRTAP3-2Q9BYR7 98 aa3.37□□□□□ -1.87
CASC11-201ENST00000502463 RPS29P62273 56 aaKnown RBP3.37□□□□□ -1.87
CASC11-201ENST00000502463 LRP1Q07954 4544 aaKnown RBP3.37□□□□□ -1.87
CASC11-201ENST00000502463 C20orf166-AS1Q96NR2 134 aa3.36□□□□□ -1.87
CASC11-201ENST00000502463 K7ERS5 55 aa3.35□□□□□ -1.87
CASC11-201ENST00000502463 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
CASC11-201ENST00000502463 A0A0D9SG42 100 aa3.32□□□□□ -1.88
CASC11-201ENST00000502463 KRTAP13-4Q3LI77 160 aa3.32□□□□□ -1.88
CASC11-201ENST00000502463 TPRXLQ17RH7 258 aa3.31□□□□□ -1.88
CASC11-201ENST00000502463 KRTAP10-6P60371 365 aaPredicted RBP3.3□□□□□ -1.88
CASC11-201ENST00000502463 RPL37P61927 97 aaKnown RBP3.29□□□□□ -1.88
CASC11-201ENST00000502463 C10orf95Q9H7T3 257 aa3.29□□□□□ -1.88
CASC11-201ENST00000502463 RNF213Q63HN8 5207 aa3.29□□□□□ -1.88
CASC11-201ENST00000502463 SPINT4Q6UDR6 99 aa3.29□□□□□ -1.88
CASC11-201ENST00000502463 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.88
CASC11-201ENST00000502463 UBR4Q5T4S7 5183 aa3.28□□□□□ -1.88
CASC11-201ENST00000502463 LCE2AQ5TA79 106 aaPredicted RBP3.28□□□□□ -1.88
CASC11-201ENST00000502463 DMBT1Q9UGM3 2413 aaPredicted RBP3.28□□□□□ -1.88
CASC11-201ENST00000502463 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
CASC11-201ENST00000502463 KRTAP12-2P59991 146 aa3.22□□□□□ -1.89
CASC11-201ENST00000502463 KRTAP15-1Q3LI76 137 aa3.22□□□□□ -1.89
CASC11-201ENST00000502463 S4R3F8 94 aa3.21□□□□□ -1.9
CASC11-201ENST00000502463 XP32Q5T750 250 aa3.18□□□□□ -1.9
CASC11-201ENST00000502463 LRP2P98164 4655 aa3.17□□□□□ -1.9
CASC11-201ENST00000502463 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
CASC11-201ENST00000502463 LUZP6Q538Z0 58 aa3.15□□□□□ -1.9
CASC11-201ENST00000502463 FLGP20930 4061 aaPredicted RBP3.15□□□□□ -1.91
CASC11-201ENST00000502463 LPAP08519 4548 aa3.14□□□□□ -1.91
CASC11-201ENST00000502463 LCE2CQ5TA81 110 aa3.11□□□□□ -1.91
CASC11-201ENST00000502463 KRTAP19-2Q3LHN2 52 aa3.09□□□□□ -1.91
CASC11-201ENST00000502463 KRTAP9-2Q9BYQ4 174 aa3.07□□□□□ -1.92
CASC11-201ENST00000502463 M0QZ58 72 aa3.05□□□□□ -1.92
CASC11-201ENST00000502463 KRTAP23-1A1A580 65 aa3.05□□□□□ -1.92
CASC11-201ENST00000502463 KRTAP9-6A0A140TA67 174 aa3.03□□□□□ -1.92
CASC11-201ENST00000502463 LCE2BO14633 110 aa3.01□□□□□ -1.93
CASC11-201ENST00000502463 PLAC4Q8WY50 150 aa2.99□□□□□ -1.93
CASC11-201ENST00000502463 R4GN34 69 aa2.99□□□□□ -1.93
CASC11-201ENST00000502463 LORP23490 312 aaPredicted RBP2.98□□□□□ -1.93
CASC11-201ENST00000502463 KRTAP4-1Q9BYQ7 146 aa2.98□□□□□ -1.93
CASC11-201ENST00000502463 MUC2Q02817 5179 aa2.89□□□□□ -1.95
CASC11-201ENST00000502463 MT1HP80294 61 aa2.89□□□□□ -1.95
CASC11-201ENST00000502463 CRCT1Q9UGL9 99 aa2.87□□□□□ -1.95
CASC11-201ENST00000502463 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
CASC11-201ENST00000502463 PP632Q6XCG6 107 aa2.85□□□□□ -1.95
CASC11-201ENST00000502463 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
CASC11-201ENST00000502463 KRTAP9-8Q9BYQ0 159 aa2.78□□□□□ -1.96
CASC11-201ENST00000502463 USH2AO75445 5202 aa2.75□□□□□ -1.97
CASC11-201ENST00000502463 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.75□□□□□ -1.97
CASC11-201ENST00000502463 TNP1P09430 55 aa2.75□□□□□ -1.97
CASC11-201ENST00000502463 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
CASC11-201ENST00000502463 KRTAP19-6Q3LI70 58 aa2.72□□□□□ -1.97
CASC11-201ENST00000502463 KRTAP9-3Q9BYQ3 159 aa2.71□□□□□ -1.97
CASC11-201ENST00000502463 M0R2T5 61 aa2.67□□□□□ -1.98
CASC11-201ENST00000502463 LOC100996750A0A140TA64 210 aa2.66□□□□□ -1.98
CASC11-201ENST00000502463 KRTAP4-6Q9BYQ5 205 aa2.66□□□□□ -1.98
CASC11-201ENST00000502463 KRTAP9-7A8MTY7 169 aa2.66□□□□□ -1.98
CASC11-201ENST00000502463 MT2AP02795 61 aa2.65□□□□□ -1.99
CASC11-201ENST00000502463 KRTAP6-3Q3LI67 103 aa2.65□□□□□ -1.99
CASC11-201ENST00000502463 KRTAP19-1Q8IUB9 90 aa2.63□□□□□ -1.99
CASC11-201ENST00000502463 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
CASC11-201ENST00000502463 MT1FP04733 61 aa2.63□□□□□ -1.99
CASC11-201ENST00000502463 SPRR2GQ9BYE4 73 aa2.63□□□□□ -1.99
CASC11-201ENST00000502463 KRTAP10-10P60014 251 aa2.6□□□□□ -1.99
CASC11-201ENST00000502463 FCGBPQ9Y6R7 5405 aaPredicted RBP2.6□□□□□ -1.99
CASC11-201ENST00000502463 KRTAP5-9P26371 169 aa2.59□□□□□ -2
CASC11-201ENST00000502463 NEBP20929 6669 aa2.58□□□□□ -2
CASC11-201ENST00000502463 PRO2289Q9P1D8 64 aa2.57□□□□□ -2
CASC11-201ENST00000502463 KRTAP19-8Q3LI54 63 aa2.53□□□□□ -2
CASC11-201ENST00000502463 MT1BP07438 61 aa2.52□□□□□ -2.01
CASC11-201ENST00000502463 KRTAP8-1Q8IUC2 63 aa2.51□□□□□ -2.01
CASC11-201ENST00000502463 INE1O15225 51 aa2.51□□□□□ -2.01
CASC11-201ENST00000502463 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
CASC11-201ENST00000502463 KRTAP10-5P60370 271 aa2.47□□□□□ -2.01
CASC11-201ENST00000502463 MT1XP80297 61 aa2.47□□□□□ -2.01
CASC11-201ENST00000502463 KRTAP10-12P60413 245 aa2.45□□□□□ -2.02
CASC11-201ENST00000502463 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
CASC11-201ENST00000502463 KRTAP10-7P60409 375 aaPredicted RBP2.43□□□□□ -2.02
CASC11-201ENST00000502463 KRTAP19-4Q3LI73 84 aa2.35□□□□□ -2.03
CASC11-201ENST00000502463 KMT2DO14686 5537 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms