RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 CASC2Q6XLA1 102 aa2.71□□□□□ -1.98
MATR3-202ENST00000502422 MUC2Q02817 5179 aa2.7□□□□□ -1.98
MATR3-202ENST00000502422 KRTAP26-1Q6PEX3 210 aa2.7□□□□□ -1.98
MATR3-202ENST00000502422 Q6ZRX8 168 aa2.7□□□□□ -1.98
MATR3-202ENST00000502422 IGKV2-24A0A0C4DH68 120 aa2.68□□□□□ -1.98
MATR3-202ENST00000502422 KRTAP5-9P26371 169 aa2.68□□□□□ -1.98
MATR3-202ENST00000502422 SPRR1AP35321 89 aa2.68□□□□□ -1.98
MATR3-202ENST00000502422 SPACA4Q8TDM5 124 aa2.68□□□□□ -1.98
MATR3-202ENST00000502422 HRES1P13985 223 aa2.68□□□□□ -1.98
MATR3-202ENST00000502422 IGFL1Q6UW32 110 aa2.68□□□□□ -1.98
MATR3-202ENST00000502422 C15orf56Q8N910 161 aa2.68□□□□□ -1.98
MATR3-202ENST00000502422 IGLV8-61A0A075B6I0 122 aa2.67□□□□□ -1.98
MATR3-202ENST00000502422 ASB16-AS1Q495Z4 193 aa2.67□□□□□ -1.98
MATR3-202ENST00000502422 PCOTHQ58A44 107 aa2.67□□□□□ -1.98
MATR3-202ENST00000502422 KRTAP7-1Q8IUC3 87 aa2.67□□□□□ -1.98
MATR3-202ENST00000502422 A0A087WSZ3 146 aa2.66□□□□□ -1.98
MATR3-202ENST00000502422 A0A087X002 238 aa2.66□□□□□ -1.98
MATR3-202ENST00000502422 PSORS1C2Q9UIG4 136 aa2.66□□□□□ -1.98
MATR3-202ENST00000502422 MMP24-AS1A0A0U1RRL7 71 aa2.65□□□□□ -1.99
MATR3-202ENST00000502422 A8MWP4 228 aa2.65□□□□□ -1.99
MATR3-202ENST00000502422 LINC00472Q9H8W2 130 aa2.65□□□□□ -1.99
MATR3-202ENST00000502422 FAM168BA1KXE4 195 aa2.65□□□□□ -1.99
MATR3-202ENST00000502422 C8orf17Q9NRJ1 99 aa2.65□□□□□ -1.99
MATR3-202ENST00000502422 K7ERS5 55 aa2.63□□□□□ -1.99
MATR3-202ENST00000502422 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
MATR3-202ENST00000502422 A0A096LNI7 61 aa2.63□□□□□ -1.99
MATR3-202ENST00000502422 CSAG1Q6PB30 78 aa2.63□□□□□ -1.99
MATR3-202ENST00000502422 SPATA8Q6RVD6 105 aa2.63□□□□□ -1.99
MATR3-202ENST00000502422 TP53AIP1Q9HCN2 124 aa2.63□□□□□ -1.99
MATR3-202ENST00000502422 FSIP2Q5CZC0 6907 aa2.63□□□□□ -1.99
MATR3-202ENST00000502422 IGKV2-30P06310 120 aa2.62□□□□□ -1.99
MATR3-202ENST00000502422 CAMK2N1Q7Z7J9 78 aa2.62□□□□□ -1.99
MATR3-202ENST00000502422 RETNLBQ9BQ08 111 aa2.62□□□□□ -1.99
MATR3-202ENST00000502422 TLX1NBP0CAT3 122 aa2.62□□□□□ -1.99
MATR3-202ENST00000502422 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
MATR3-202ENST00000502422 Q96NJ1 140 aa2.59□□□□□ -1.99
MATR3-202ENST00000502422 A0A1B0GU69 56 aa2.58□□□□□ -2
MATR3-202ENST00000502422 IGLV7-43P04211 117 aa2.58□□□□□ -2
MATR3-202ENST00000502422 ZNF861PO60384 105 aa2.58□□□□□ -2
MATR3-202ENST00000502422 ACYP2P14621 99 aa2.58□□□□□ -2
MATR3-202ENST00000502422 SPRR1BP22528 89 aa2.58□□□□□ -2
MATR3-202ENST00000502422 PRLHP81277 87 aa2.58□□□□□ -2
MATR3-202ENST00000502422 MIR22HGQ0VDD5 57 aa2.57□□□□□ -2
MATR3-202ENST00000502422 KRTAP13-3Q3SY46 172 aa2.57□□□□□ -2
MATR3-202ENST00000502422 UQCR11O14957 56 aa2.56□□□□□ -2
MATR3-202ENST00000502422 ROMO1P60602 79 aa2.56□□□□□ -2
MATR3-202ENST00000502422 A0A1B0GVX0 72 aa2.55□□□□□ -2
MATR3-202ENST00000502422 KRTAP1-4P0C5Y4 121 aa2.55□□□□□ -2
MATR3-202ENST00000502422 Q5W150 140 aa2.55□□□□□ -2
MATR3-202ENST00000502422 KRTAP11-1Q8IUC1 163 aa2.55□□□□□ -2
MATR3-202ENST00000502422 MRPL34Q9BQ48 92 aaKnown RBP2.55□□□□□ -2
MATR3-202ENST00000502422 DMAC1Q96GE9 116 aa2.54□□□□□ -2
MATR3-202ENST00000502422 TYMSOSQ8TAI1 123 aa2.54□□□□□ -2
MATR3-202ENST00000502422 P0C880 135 aa2.53□□□□□ -2
MATR3-202ENST00000502422 KRTAP25-1Q3LHN0 102 aa2.53□□□□□ -2
MATR3-202ENST00000502422 TPRXLQ17RH7 258 aa2.52□□□□□ -2.01
MATR3-202ENST00000502422 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
MATR3-202ENST00000502422 KRTAP10-7P60409 375 aaPredicted RBP2.51□□□□□ -2.01
MATR3-202ENST00000502422 A8MUU9 505 aa2.5□□□□□ -2.01
MATR3-202ENST00000502422 MUC17Q685J3 4493 aa2.49□□□□□ -2.01
MATR3-202ENST00000502422 IGKV2D-30A0A075B6S6 120 aa2.49□□□□□ -2.01
MATR3-202ENST00000502422 KRTAP13-1Q8IUC0 172 aa2.49□□□□□ -2.01
MATR3-202ENST00000502422 LINC00304Q8N9R0 145 aa2.49□□□□□ -2.01
MATR3-202ENST00000502422 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
MATR3-202ENST00000502422 ANAPC11Q9NYG5 84 aa2.48□□□□□ -2.01
MATR3-202ENST00000502422 H0YAA0 97 aa2.46□□□□□ -2.02
MATR3-202ENST00000502422 LINC00483Q53H64 154 aa2.46□□□□□ -2.02
MATR3-202ENST00000502422 KRTAP13-2Q52LG2 175 aa2.45□□□□□ -2.02
MATR3-202ENST00000502422 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
MATR3-202ENST00000502422 KRTAP4-1Q9BYQ7 146 aa2.43□□□□□ -2.02
MATR3-202ENST00000502422 CRIPTQ9P021 101 aa2.43□□□□□ -2.02
MATR3-202ENST00000502422 M0R2T5 61 aa2.42□□□□□ -2.02
MATR3-202ENST00000502422 C20orf166-AS1Q96NR2 134 aa2.42□□□□□ -2.02
MATR3-202ENST00000502422 SPINK1P00995 79 aa2.42□□□□□ -2.02
MATR3-202ENST00000502422 MT1HP80294 61 aa2.41□□□□□ -2.02
MATR3-202ENST00000502422 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
MATR3-202ENST00000502422 SSPOA2VEC9 5147 aa2.4□□□□□ -2.02
MATR3-202ENST00000502422 KRTAP10-6P60371 365 aaPredicted RBP2.39□□□□□ -2.03
MATR3-202ENST00000502422 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
MATR3-202ENST00000502422 NDUFAF8A1L188 74 aa2.39□□□□□ -2.03
MATR3-202ENST00000502422 SPINT4Q6UDR6 99 aa2.39□□□□□ -2.03
MATR3-202ENST00000502422 SSBP3-AS1Q7Z2R9 100 aa2.39□□□□□ -2.03
MATR3-202ENST00000502422 A0A1B0GU33 70 aa2.38□□□□□ -2.03
MATR3-202ENST00000502422 COX6B2Q6YFQ2 88 aa2.37□□□□□ -2.03
MATR3-202ENST00000502422 KRTAP19-2Q3LHN2 52 aa2.36□□□□□ -2.03
MATR3-202ENST00000502422 H1FX-AS1Q4G0G2 97 aa2.36□□□□□ -2.03
MATR3-202ENST00000502422 RPS29P62273 56 aaKnown RBP2.34□□□□□ -2.03
MATR3-202ENST00000502422 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
MATR3-202ENST00000502422 C9orf92A6NGG3 77 aa2.33□□□□□ -2.04
MATR3-202ENST00000502422 LCE1EQ5T753 118 aa2.32□□□□□ -2.04
MATR3-202ENST00000502422 C10orf95Q9H7T3 257 aa2.31□□□□□ -2.04
MATR3-202ENST00000502422 USH2AO75445 5202 aa2.3□□□□□ -2.04
MATR3-202ENST00000502422 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
MATR3-202ENST00000502422 FLGP20930 4061 aaPredicted RBP2.29□□□□□ -2.04
MATR3-202ENST00000502422 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
MATR3-202ENST00000502422 MACF1Q9UPN3 7388 aaKnown RBP2.29□□□□□ -2.04
MATR3-202ENST00000502422 RPL37P61927 97 aaKnown RBP2.28□□□□□ -2.04
MATR3-202ENST00000502422 KRTAP2-3P0C7H8 128 aa2.28□□□□□ -2.05
MATR3-202ENST00000502422 KRTAP13-4Q3LI77 160 aa2.28□□□□□ -2.05
MATR3-202ENST00000502422 KRTAP2-4Q9BYR9 128 aa2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms