RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 DNAH3Q8TD57 4116 aa5.89□□□□□ -1.47
PBX1-211ENST00000498497 KRTAP1-4P0C5Y4 121 aa5.88□□□□□ -1.47
PBX1-211ENST00000498497 FAT2Q9NYQ8 4349 aa5.87□□□□□ -1.47
PBX1-211ENST00000498497 XP32Q5T750 250 aa5.86□□□□□ -1.47
PBX1-211ENST00000498497 KRTAP3-3Q9BYR6 98 aa5.85□□□□□ -1.47
PBX1-211ENST00000498497 PRKDCP78527 4128 aaKnown RBP5.83□□□□□ -1.48
PBX1-211ENST00000498497 SMR3BP02814 79 aaPredicted RBP5.82□□□□□ -1.48
PBX1-211ENST00000498497 KRTAP10-1P60331 282 aa5.78□□□□□ -1.48
PBX1-211ENST00000498497 DNAH5Q8TE73 4624 aa5.77□□□□□ -1.49
PBX1-211ENST00000498497 APOBP04114 4563 aaKnown RBP5.73□□□□□ -1.49
PBX1-211ENST00000498497 FAT1Q14517 4588 aa5.7□□□□□ -1.5
PBX1-211ENST00000498497 M0QZ58 72 aa5.69□□□□□ -1.5
PBX1-211ENST00000498497 PKHD1P08F94 4074 aa5.69□□□□□ -1.5
PBX1-211ENST00000498497 HSPG2P98160 4391 aa5.65□□□□□ -1.51
PBX1-211ENST00000498497 LRP1Q07954 4544 aaKnown RBP5.64□□□□□ -1.51
PBX1-211ENST00000498497 R4GN34 69 aa5.59□□□□□ -1.51
PBX1-211ENST00000498497 LPAP08519 4548 aa5.58□□□□□ -1.52
PBX1-211ENST00000498497 DYNC2H1Q8NCM8 4307 aaKnown RBP5.58□□□□□ -1.52
PBX1-211ENST00000498497 KMT2CQ8NEZ4 4911 aaKnown RBP5.54□□□□□ -1.52
PBX1-211ENST00000498497 DYNC1H1Q14204 4646 aaKnown RBP5.54□□□□□ -1.52
PBX1-211ENST00000498497 HYDINQ4G0P3 5121 aa5.53□□□□□ -1.52
PBX1-211ENST00000498497 J3QL48 77 aa5.52□□□□□ -1.53
PBX1-211ENST00000498497 FAT3Q8TDW7 4589 aa5.51□□□□□ -1.53
PBX1-211ENST00000498497 CAMK2N1Q7Z7J9 78 aa5.5□□□□□ -1.53
PBX1-211ENST00000498497 LORP23490 312 aaPredicted RBP5.43□□□□□ -1.54
PBX1-211ENST00000498497 PKD1P98161 4303 aa5.39□□□□□ -1.55
PBX1-211ENST00000498497 RYR3Q15413 4870 aa5.39□□□□□ -1.55
PBX1-211ENST00000498497 SACSQ9NZJ4 4579 aa5.39□□□□□ -1.55
PBX1-211ENST00000498497 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
PBX1-211ENST00000498497 LRP2P98164 4655 aa5.38□□□□□ -1.55
PBX1-211ENST00000498497 RPS29P62273 56 aaKnown RBP5.36□□□□□ -1.55
PBX1-211ENST00000498497 RYR2Q92736 4967 aa5.32□□□□□ -1.56
PBX1-211ENST00000498497 EPPK1P58107 5090 aaKnown RBP5.27□□□□□ -1.57
PBX1-211ENST00000498497 A0A1B0GVY2 172 aa5.27□□□□□ -1.57
PBX1-211ENST00000498497 KIAA1109Q2LD37 5005 aa5.26□□□□□ -1.57
PBX1-211ENST00000498497 PP632Q6XCG6 107 aa5.25□□□□□ -1.57
PBX1-211ENST00000498497 PKHD1L1Q86WI1 4243 aa5.23□□□□□ -1.57
PBX1-211ENST00000498497 Q5VSD8 79 aa5.23□□□□□ -1.57
PBX1-211ENST00000498497 RYR1P21817 5038 aa5.21□□□□□ -1.58
PBX1-211ENST00000498497 KRTAP4-5Q9BYR2 181 aa5.17□□□□□ -1.58
PBX1-211ENST00000498497 BIRC6Q9NR09 4857 aa5.14□□□□□ -1.59
PBX1-211ENST00000498497 TNP1P09430 55 aa5.12□□□□□ -1.59
PBX1-211ENST00000498497 MUC2Q02817 5179 aa5.07□□□□□ -1.6
PBX1-211ENST00000498497 SPRR5A0A1B0GTR4 108 aa5.04□□□□□ -1.6
PBX1-211ENST00000498497 KRTAP17-1Q9BYP8 105 aa5.04□□□□□ -1.6
PBX1-211ENST00000498497 INE1O15225 51 aa5.03□□□□□ -1.6
PBX1-211ENST00000498497 KRTAP10-4P60372 401 aaPredicted RBP5.02□□□□□ -1.61
PBX1-211ENST00000498497 HERC2O95714 4834 aa5.01□□□□□ -1.61
PBX1-211ENST00000498497 TNXBP22105 4242 aa4.99□□□□□ -1.61
PBX1-211ENST00000498497 ABCA13Q86UQ4 5058 aa4.93□□□□□ -1.62
PBX1-211ENST00000498497 PCLOQ9Y6V0 5065 aa4.92□□□□□ -1.62
PBX1-211ENST00000498497 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
PBX1-211ENST00000498497 HERC1Q15751 4861 aa4.81□□□□□ -1.64
PBX1-211ENST00000498497 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
PBX1-211ENST00000498497 FAT4Q6V0I7 4981 aa4.75□□□□□ -1.65
PBX1-211ENST00000498497 KRTAP4-1Q9BYQ7 146 aa4.72□□□□□ -1.65
PBX1-211ENST00000498497 HMCN2Q8NDA2 5059 aa4.7□□□□□ -1.66
PBX1-211ENST00000498497 LCE2DQ5TA82 110 aaPredicted RBP4.64□□□□□ -1.67
PBX1-211ENST00000498497 MUC17Q685J3 4493 aa4.63□□□□□ -1.67
PBX1-211ENST00000498497 UBR4Q5T4S7 5183 aa4.6□□□□□ -1.67
PBX1-211ENST00000498497 FLGP20930 4061 aaPredicted RBP4.58□□□□□ -1.68
PBX1-211ENST00000498497 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
PBX1-211ENST00000498497 RNF213Q63HN8 5207 aa4.55□□□□□ -1.68
PBX1-211ENST00000498497 KMT2DO14686 5537 aa4.54□□□□□ -1.68
PBX1-211ENST00000498497 KRTAP12-3P60328 96 aa4.53□□□□□ -1.68
PBX1-211ENST00000498497 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
PBX1-211ENST00000498497 M0R2T5 61 aa4.46□□□□□ -1.7
PBX1-211ENST00000498497 KRTAP10-12P60413 245 aa4.46□□□□□ -1.7
PBX1-211ENST00000498497 KRTAP8-1Q8IUC2 63 aa4.41□□□□□ -1.7
PBX1-211ENST00000498497 KRTAP19-2Q3LHN2 52 aa4.36□□□□□ -1.71
PBX1-211ENST00000498497 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
PBX1-211ENST00000498497 KRTAP19-1Q8IUB9 90 aa4.33□□□□□ -1.72
PBX1-211ENST00000498497 USH2AO75445 5202 aa4.29□□□□□ -1.72
PBX1-211ENST00000498497 KRTAP10-7P60409 375 aaPredicted RBP4.28□□□□□ -1.72
PBX1-211ENST00000498497 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
PBX1-211ENST00000498497 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
PBX1-211ENST00000498497 SPRR2GQ9BYE4 73 aa4.21□□□□□ -1.74
PBX1-211ENST00000498497 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
PBX1-211ENST00000498497 KRTAP10-5P60370 271 aa4.18□□□□□ -1.74
PBX1-211ENST00000498497 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
PBX1-211ENST00000498497 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
PBX1-211ENST00000498497 FSIP2Q5CZC0 6907 aa4.17□□□□□ -1.74
PBX1-211ENST00000498497 MT1XP80297 61 aa4.15□□□□□ -1.75
PBX1-211ENST00000498497 DSTQ03001 7570 aaKnown RBP4.12□□□□□ -1.75
PBX1-211ENST00000498497 MT1FP04733 61 aa4.11□□□□□ -1.75
PBX1-211ENST00000498497 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
PBX1-211ENST00000498497 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
PBX1-211ENST00000498497 CRCT1Q9UGL9 99 aa4.09□□□□□ -1.75
PBX1-211ENST00000498497 MT1HP80294 61 aa4.07□□□□□ -1.76
PBX1-211ENST00000498497 KRTAP4-8A0A0G2JLE6 195 aa4.04□□□□□ -1.76
PBX1-211ENST00000498497 KRTAP4-8Q9BYQ9 185 aa4.04□□□□□ -1.76
PBX1-211ENST00000498497 LCE2CQ5TA81 110 aa4.03□□□□□ -1.76
PBX1-211ENST00000498497 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
PBX1-211ENST00000498497 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
PBX1-211ENST00000498497 KRTAP2-1Q9BYU5 128 aa4.02□□□□□ -1.77
PBX1-211ENST00000498497 LCE2AQ5TA79 106 aaPredicted RBP4.01□□□□□ -1.77
PBX1-211ENST00000498497 MT2AP02795 61 aa4.01□□□□□ -1.77
PBX1-211ENST00000498497 MT1BP07438 61 aa4□□□□□ -1.77
PBX1-211ENST00000498497 KRTAP9-2Q9BYQ4 174 aa3.97□□□□□ -1.77
PBX1-211ENST00000498497 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms