RNA–Protein interactions for RNA: ENST00000498171.5

DGCR8-210, Transcript of DGCR8, microprocessor complex subunit, humanhuman

TSL 1 (best)

Gene DGCR8, Length 3,661 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DGCR8-210ENST00000498171 KRTAP13-4Q3LI77 160 aa6.16□□□□□ -1.42
DGCR8-210ENST00000498171 DYNC1H1Q14204 4646 aaKnown RBP6.15□□□□□ -1.42
DGCR8-210ENST00000498171 KRTAP1-4P0C5Y4 121 aa6.14□□□□□ -1.43
DGCR8-210ENST00000498171 KMT2CQ8NEZ4 4911 aaKnown RBP6.11□□□□□ -1.43
DGCR8-210ENST00000498171 APOBP04114 4563 aaKnown RBP6.1□□□□□ -1.43
DGCR8-210ENST00000498171 PKHD1L1Q86WI1 4243 aa6.09□□□□□ -1.43
DGCR8-210ENST00000498171 KRTAP10-6P60371 365 aaPredicted RBP6.04□□□□□ -1.44
DGCR8-210ENST00000498171 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
DGCR8-210ENST00000498171 S4R3F8 94 aa6.02□□□□□ -1.45
DGCR8-210ENST00000498171 C9orf92A6NGG3 77 aa6.02□□□□□ -1.45
DGCR8-210ENST00000498171 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
DGCR8-210ENST00000498171 RYR2Q92736 4967 aa5.99□□□□□ -1.45
DGCR8-210ENST00000498171 SMR3BP02814 79 aaPredicted RBP5.97□□□□□ -1.45
DGCR8-210ENST00000498171 HSPG2P98160 4391 aa5.97□□□□□ -1.45
DGCR8-210ENST00000498171 MYCBP2O75592 4640 aa5.96□□□□□ -1.46
DGCR8-210ENST00000498171 KRTAP3-2Q9BYR7 98 aa5.93□□□□□ -1.46
DGCR8-210ENST00000498171 TNXBP22105 4242 aa5.92□□□□□ -1.46
DGCR8-210ENST00000498171 XP32Q5T750 250 aa5.9□□□□□ -1.46
DGCR8-210ENST00000498171 RYR3Q15413 4870 aa5.89□□□□□ -1.47
DGCR8-210ENST00000498171 LPAP08519 4548 aa5.89□□□□□ -1.47
DGCR8-210ENST00000498171 FAT3Q8TDW7 4589 aa5.89□□□□□ -1.47
DGCR8-210ENST00000498171 KRTAP10-4P60372 401 aaPredicted RBP5.88□□□□□ -1.47
DGCR8-210ENST00000498171 KRTAP3-3Q9BYR6 98 aa5.87□□□□□ -1.47
DGCR8-210ENST00000498171 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
DGCR8-210ENST00000498171 KRTAP12-1P59990 96 aa5.86□□□□□ -1.47
DGCR8-210ENST00000498171 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
DGCR8-210ENST00000498171 A0A1B0GVY2 172 aa5.8□□□□□ -1.48
DGCR8-210ENST00000498171 KRTAP17-1Q9BYP8 105 aa5.78□□□□□ -1.48
DGCR8-210ENST00000498171 KIAA1109Q2LD37 5005 aa5.73□□□□□ -1.49
DGCR8-210ENST00000498171 KRTAP10-8P60410 259 aa5.71□□□□□ -1.5
DGCR8-210ENST00000498171 RPS29P62273 56 aaKnown RBP5.7□□□□□ -1.5
DGCR8-210ENST00000498171 RYR1P21817 5038 aa5.69□□□□□ -1.5
DGCR8-210ENST00000498171 ABCA13Q86UQ4 5058 aa5.68□□□□□ -1.5
DGCR8-210ENST00000498171 LRP2P98164 4655 aa5.68□□□□□ -1.5
DGCR8-210ENST00000498171 EPPK1P58107 5090 aaKnown RBP5.67□□□□□ -1.5
DGCR8-210ENST00000498171 J3QL48 77 aa5.62□□□□□ -1.51
DGCR8-210ENST00000498171 M0QZ58 72 aa5.51□□□□□ -1.53
DGCR8-210ENST00000498171 Q5VSD8 79 aa5.51□□□□□ -1.53
DGCR8-210ENST00000498171 MT1HL1P0DM35 61 aa5.46□□□□□ -1.54
DGCR8-210ENST00000498171 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
DGCR8-210ENST00000498171 KRTAP4-5Q9BYR2 181 aa5.44□□□□□ -1.54
DGCR8-210ENST00000498171 MUC2Q02817 5179 aa5.43□□□□□ -1.54
DGCR8-210ENST00000498171 R4GN34 69 aa5.38□□□□□ -1.55
DGCR8-210ENST00000498171 PRO2289Q9P1D8 64 aa5.37□□□□□ -1.55
DGCR8-210ENST00000498171 MUC17Q685J3 4493 aa5.36□□□□□ -1.55
DGCR8-210ENST00000498171 BIRC6Q9NR09 4857 aa5.33□□□□□ -1.56
DGCR8-210ENST00000498171 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
DGCR8-210ENST00000498171 HERC2O95714 4834 aa5.3□□□□□ -1.56
DGCR8-210ENST00000498171 LORP23490 312 aaPredicted RBP5.28□□□□□ -1.56
DGCR8-210ENST00000498171 PCLOQ9Y6V0 5065 aa5.24□□□□□ -1.57
DGCR8-210ENST00000498171 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
DGCR8-210ENST00000498171 KRTAP4-1Q9BYQ7 146 aa5.2□□□□□ -1.58
DGCR8-210ENST00000498171 HERC1Q15751 4861 aa5.19□□□□□ -1.58
DGCR8-210ENST00000498171 FAT4Q6V0I7 4981 aa5.13□□□□□ -1.59
DGCR8-210ENST00000498171 INE1O15225 51 aa5.09□□□□□ -1.59
DGCR8-210ENST00000498171 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
DGCR8-210ENST00000498171 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
DGCR8-210ENST00000498171 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
DGCR8-210ENST00000498171 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
DGCR8-210ENST00000498171 TNP1P09430 55 aa5.02□□□□□ -1.61
DGCR8-210ENST00000498171 HMCN2Q8NDA2 5059 aa4.97□□□□□ -1.61
DGCR8-210ENST00000498171 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
DGCR8-210ENST00000498171 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
DGCR8-210ENST00000498171 M0R2T5 61 aa4.84□□□□□ -1.64
DGCR8-210ENST00000498171 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
DGCR8-210ENST00000498171 LCE2CQ5TA81 110 aa4.75□□□□□ -1.65
DGCR8-210ENST00000498171 KRTAP19-1Q8IUB9 90 aa4.62□□□□□ -1.67
DGCR8-210ENST00000498171 MT1HP80294 61 aa4.56□□□□□ -1.68
DGCR8-210ENST00000498171 MT1FP04733 61 aa4.54□□□□□ -1.68
DGCR8-210ENST00000498171 KRTAP10-10P60014 251 aa4.54□□□□□ -1.68
DGCR8-210ENST00000498171 SPRR2GQ9BYE4 73 aa4.53□□□□□ -1.68
DGCR8-210ENST00000498171 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
DGCR8-210ENST00000498171 USH2AO75445 5202 aa4.51□□□□□ -1.69
DGCR8-210ENST00000498171 MT2AP02795 61 aa4.49□□□□□ -1.69
DGCR8-210ENST00000498171 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
DGCR8-210ENST00000498171 KRTAP9-8Q9BYQ0 159 aa4.49□□□□□ -1.69
DGCR8-210ENST00000498171 LCE2DQ5TA82 110 aaPredicted RBP4.45□□□□□ -1.7
DGCR8-210ENST00000498171 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
DGCR8-210ENST00000498171 KMT2DO14686 5537 aa4.43□□□□□ -1.7
DGCR8-210ENST00000498171 MT1BP07438 61 aa4.37□□□□□ -1.71
DGCR8-210ENST00000498171 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
DGCR8-210ENST00000498171 MT1XP80297 61 aa4.34□□□□□ -1.71
DGCR8-210ENST00000498171 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
DGCR8-210ENST00000498171 KRTAP10-7P60409 375 aaPredicted RBP4.28□□□□□ -1.72
DGCR8-210ENST00000498171 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
DGCR8-210ENST00000498171 KRTAP9-2Q9BYQ4 174 aa4.25□□□□□ -1.73
DGCR8-210ENST00000498171 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
DGCR8-210ENST00000498171 LCE2BO14633 110 aa4.2□□□□□ -1.74
DGCR8-210ENST00000498171 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
DGCR8-210ENST00000498171 KRTAP2-3P0C7H8 128 aa4.14□□□□□ -1.75
DGCR8-210ENST00000498171 KRTAP2-4Q9BYR9 128 aa4.14□□□□□ -1.75
DGCR8-210ENST00000498171 KRTAP2-1Q9BYU5 128 aa4.14□□□□□ -1.75
DGCR8-210ENST00000498171 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
DGCR8-210ENST00000498171 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
DGCR8-210ENST00000498171 KRTAP4-8Q9BYQ9 185 aa4.08□□□□□ -1.76
DGCR8-210ENST00000498171 KRTAP9-6A0A140TA67 174 aa4.07□□□□□ -1.76
DGCR8-210ENST00000498171 CRCT1Q9UGL9 99 aa4.04□□□□□ -1.76
DGCR8-210ENST00000498171 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
DGCR8-210ENST00000498171 LCE2AQ5TA79 106 aaPredicted RBP4.03□□□□□ -1.76
DGCR8-210ENST00000498171 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms