RNA–Protein interactions for RNA: ENST00000498035.5

HM13-224, Transcript of histocompatibility minor 13, human

TSL 2 BASIC

Gene HM13, Length 3,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HM13-224	ENST00000498035	HSPG2	P98160	4391 aa		4.94	□□□□□ -1.62
HM13-224	ENST00000498035	SRRM2	Q9UQ35	2752 aa	Known RBP	4.91	□□□□□ -1.62
HM13-224	ENST00000498035	TPRXL	Q17RH7	258 aa		4.89	□□□□□ -1.63
HM13-224	ENST00000498035	LCE2A	Q5TA79	106 aa	Predicted RBP	4.89	□□□□□ -1.63
HM13-224	ENST00000498035	KRTAP13-2	Q52LG2	175 aa		4.86	□□□□□ -1.63
HM13-224	ENST00000498035	MEGF8	Q7Z7M0	2845 aa		4.85	□□□□□ -1.63
HM13-224	ENST00000498035		Q6ZSA8	131 aa		4.83	□□□□□ -1.64
HM13-224	ENST00000498035	APOB	P04114	4563 aa	Known RBP	4.82	□□□□□ -1.64
HM13-224	ENST00000498035		Q5VSD8	79 aa		4.81	□□□□□ -1.64
HM13-224	ENST00000498035	KRTAP3-1	Q9BYR8	98 aa		4.78	□□□□□ -1.65
HM13-224	ENST00000498035	LRP1B	Q9NZR2	4599 aa		4.76	□□□□□ -1.65
HM13-224	ENST00000498035	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.75	□□□□□ -1.65
HM13-224	ENST00000498035	KRTAP1-4	P0C5Y4	121 aa		4.75	□□□□□ -1.65
HM13-224	ENST00000498035	RYR3	Q15413	4870 aa		4.74	□□□□□ -1.65
HM13-224	ENST00000498035	LCE2B	O14633	110 aa		4.71	□□□□□ -1.65
HM13-224	ENST00000498035	RPS29	P62273	56 aa	Known RBP	4.71	□□□□□ -1.65
HM13-224	ENST00000498035	C10orf95	Q9H7T3	257 aa		4.71	□□□□□ -1.66
HM13-224	ENST00000498035	PLAC4	Q8WY50	150 aa		4.7	□□□□□ -1.66
HM13-224	ENST00000498035	LPA	P08519	4548 aa		4.68	□□□□□ -1.66
HM13-224	ENST00000498035	RYR2	Q92736	4967 aa		4.65	□□□□□ -1.67
HM13-224	ENST00000498035	COX6B2	Q6YFQ2	88 aa		4.63	□□□□□ -1.67
HM13-224	ENST00000498035		H0YAA0	97 aa		4.62	□□□□□ -1.67
HM13-224	ENST00000498035	DYNC1H1	Q14204	4646 aa	Known RBP	4.6	□□□□□ -1.67
HM13-224	ENST00000498035	KRTAP10-8	P60410	259 aa		4.59	□□□□□ -1.67
HM13-224	ENST00000498035		A0A0D9SG42	100 aa		4.58	□□□□□ -1.68
HM13-224	ENST00000498035		A0A1B0GVY2	172 aa		4.58	□□□□□ -1.68
HM13-224	ENST00000498035		S4R3F8	94 aa		4.56	□□□□□ -1.68
HM13-224	ENST00000498035	INE1	O15225	51 aa		4.53	□□□□□ -1.68
HM13-224	ENST00000498035	RPL37	P61927	97 aa	Known RBP	4.52	□□□□□ -1.69
HM13-224	ENST00000498035	FAT1	Q14517	4588 aa		4.52	□□□□□ -1.69
HM13-224	ENST00000498035	KRTAP13-3	Q3SY46	172 aa		4.51	□□□□□ -1.69
HM13-224	ENST00000498035	LOR	P23490	312 aa	Predicted RBP	4.48	□□□□□ -1.69
HM13-224	ENST00000498035	H1FX-AS1	Q4G0G2	97 aa		4.47	□□□□□ -1.69
HM13-224	ENST00000498035	XP32	Q5T750	250 aa		4.46	□□□□□ -1.7
HM13-224	ENST00000498035	ABCA13	Q86UQ4	5058 aa		4.46	□□□□□ -1.7
HM13-224	ENST00000498035	LRP1	Q07954	4544 aa	Known RBP	4.4	□□□□□ -1.71
HM13-224	ENST00000498035	FLG	P20930	4061 aa	Predicted RBP	4.38	□□□□□ -1.71
HM13-224	ENST00000498035	EPPK1	P58107	5090 aa	Known RBP	4.38	□□□□□ -1.71
HM13-224	ENST00000498035	PP632	Q6XCG6	107 aa		4.37	□□□□□ -1.71
HM13-224	ENST00000498035		M0R2T5	61 aa		4.36	□□□□□ -1.71
HM13-224	ENST00000498035		M0QZ58	72 aa		4.35	□□□□□ -1.71
HM13-224	ENST00000498035	RYR1	P21817	5038 aa		4.34	□□□□□ -1.71
HM13-224	ENST00000498035	KRTAP10-4	P60372	401 aa	Predicted RBP	4.34	□□□□□ -1.71
HM13-224	ENST00000498035	MUC17	Q685J3	4493 aa		4.31	□□□□□ -1.72
HM13-224	ENST00000498035	MT1HL1	P0DM35	61 aa		4.25	□□□□□ -1.73
HM13-224	ENST00000498035	KRTAP12-2	P59991	146 aa		4.24	□□□□□ -1.73
HM13-224	ENST00000498035	KIAA1109	Q2LD37	5005 aa		4.23	□□□□□ -1.73
HM13-224	ENST00000498035	PCLO	Q9Y6V0	5065 aa		4.17	□□□□□ -1.74
HM13-224	ENST00000498035	KRTAP4-5	Q9BYR2	181 aa		4.17	□□□□□ -1.74
HM13-224	ENST00000498035	KRTAP17-1	Q9BYP8	105 aa		4.15	□□□□□ -1.74
HM13-224	ENST00000498035	BIRC6	Q9NR09	4857 aa		4.12	□□□□□ -1.75
HM13-224	ENST00000498035	KRTAP10-6	P60371	365 aa	Predicted RBP	4.07	□□□□□ -1.76
HM13-224	ENST00000498035	MUC2	Q02817	5179 aa		4.05	□□□□□ -1.76
HM13-224	ENST00000498035	KRTAP13-4	Q3LI77	160 aa		4.03	□□□□□ -1.76
HM13-224	ENST00000498035	HERC2	O95714	4834 aa		3.99	□□□□□ -1.77
HM13-224	ENST00000498035	KRTAP12-1	P59990	96 aa		3.98	□□□□□ -1.77
HM13-224	ENST00000498035	TNP1	P09430	55 aa		3.96	□□□□□ -1.78
HM13-224	ENST00000498035	KRTAP10-10	P60014	251 aa		3.96	□□□□□ -1.78
HM13-224	ENST00000498035	LRP2	P98164	4655 aa		3.95	□□□□□ -1.78
HM13-224	ENST00000498035	HERC1	Q15751	4861 aa		3.87	□□□□□ -1.79
HM13-224	ENST00000498035	KRTAP4-1	Q9BYQ7	146 aa		3.84	□□□□□ -1.79
HM13-224	ENST00000498035	UBR4	Q5T4S7	5183 aa		3.8	□□□□□ -1.8
HM13-224	ENST00000498035	HMCN2	Q8NDA2	5059 aa		3.79	□□□□□ -1.8
HM13-224	ENST00000498035	LCE5A	Q5TCM9	118 aa		3.77	□□□□□ -1.81
HM13-224	ENST00000498035	SPRR5	A0A1B0GTR4	108 aa		3.76	□□□□□ -1.81
HM13-224	ENST00000498035	KRTAP2-2	Q9BYT5	123 aa		3.7	□□□□□ -1.82
HM13-224	ENST00000498035	RNF213	Q63HN8	5207 aa		3.69	□□□□□ -1.82
HM13-224	ENST00000498035	FAT4	Q6V0I7	4981 aa		3.69	□□□□□ -1.82
HM13-224	ENST00000498035	KRTAP19-2	Q3LHN2	52 aa		3.69	□□□□□ -1.82
HM13-224	ENST00000498035	LCE1F	Q5T754	118 aa		3.6	□□□□□ -1.83
HM13-224	ENST00000498035	MT1H	P80294	61 aa		3.6	□□□□□ -1.83
HM13-224	ENST00000498035	KRTAP9-4	Q9BYQ2	154 aa		3.57	□□□□□ -1.84
HM13-224	ENST00000498035	KRTAP19-4	Q3LI73	84 aa		3.55	□□□□□ -1.84
HM13-224	ENST00000498035	MT2A	P02795	61 aa		3.54	□□□□□ -1.84
HM13-224	ENST00000498035	SPRR2G	Q9BYE4	73 aa		3.51	□□□□□ -1.85
HM13-224	ENST00000498035	MT1F	P04733	61 aa		3.51	□□□□□ -1.85
HM13-224	ENST00000498035	FSIP2	Q5CZC0	6907 aa		3.5	□□□□□ -1.85
HM13-224	ENST00000498035	LCE3C	Q5T5A8	94 aa		3.5	□□□□□ -1.85
HM13-224	ENST00000498035	LCE1E	Q5T753	118 aa		3.5	□□□□□ -1.85
HM13-224	ENST00000498035	KRTAP10-12	P60413	245 aa		3.49	□□□□□ -1.85
HM13-224	ENST00000498035	LCE1A	Q5T7P2	110 aa		3.49	□□□□□ -1.85
HM13-224	ENST00000498035	LCE3A	Q5TA76	89 aa		3.46	□□□□□ -1.86
HM13-224	ENST00000498035	KRTAP19-1	Q8IUB9	90 aa		3.44	□□□□□ -1.86
HM13-224	ENST00000498035	KRTAP12-3	P60328	96 aa		3.41	□□□□□ -1.86
HM13-224	ENST00000498035	KRTAP9-8	Q9BYQ0	159 aa		3.37	□□□□□ -1.87
HM13-224	ENST00000498035	KRTAP19-8	Q3LI54	63 aa		3.33	□□□□□ -1.88
HM13-224	ENST00000498035	KRTAP9-9	Q9BYP9	154 aa		3.31	□□□□□ -1.88
HM13-224	ENST00000498035	LCE1D	Q5T752	114 aa		3.3	□□□□□ -1.88
HM13-224	ENST00000498035	LCE4A	Q5TA78	99 aa		3.3	□□□□□ -1.88
HM13-224	ENST00000498035	KRTAP6-3	Q3LI67	103 aa		3.3	□□□□□ -1.88
HM13-224	ENST00000498035	MT1B	P07438	61 aa		3.28	□□□□□ -1.88
HM13-224	ENST00000498035	KRTAP9-6	A0A140TA67	174 aa		3.27	□□□□□ -1.89
HM13-224	ENST00000498035	KRTAP9-7	A8MTY7	169 aa		3.27	□□□□□ -1.89
HM13-224	ENST00000498035	MT3	P25713	68 aa		3.25	□□□□□ -1.89
HM13-224	ENST00000498035	MT1X	P80297	61 aa		3.25	□□□□□ -1.89
HM13-224	ENST00000498035	KRTAP9-3	Q9BYQ3	159 aa		3.25	□□□□□ -1.89
HM13-224	ENST00000498035	USH2A	O75445	5202 aa		3.25	□□□□□ -1.89
HM13-224	ENST00000498035	LCE3E	Q5T5B0	92 aa		3.25	□□□□□ -1.89
HM13-224	ENST00000498035	KRTAP8-1	Q8IUC2	63 aa		3.25	□□□□□ -1.89
HM13-224	ENST00000498035	KRTAP10-5	P60370	271 aa		3.23	□□□□□ -1.89

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms