RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 ATP5EP2Q5VTU8 51 aa2.87□□□□□ -1.95
MSH5-219ENST00000497269 DNAL4O96015 105 aa2.86□□□□□ -1.95
MSH5-219ENST00000497269 SPRR5A0A1B0GTR4 108 aa2.85□□□□□ -1.95
MSH5-219ENST00000497269 JMJD7-PLA2G4BH0Y9G9 81 aa2.84□□□□□ -1.95
MSH5-219ENST00000497269 ATOX1O00244 68 aa2.84□□□□□ -1.95
MSH5-219ENST00000497269 UQCRQO14949 82 aa2.84□□□□□ -1.95
MSH5-219ENST00000497269 BAALC-AS2P0C853 105 aa2.84□□□□□ -1.95
MSH5-219ENST00000497269 MACF1Q9UPN3 7388 aaKnown RBP2.83□□□□□ -1.96
MSH5-219ENST00000497269 SYNE2Q8WXH0 6885 aaKnown RBP2.83□□□□□ -1.96
MSH5-219ENST00000497269 CCKP06307 115 aa2.83□□□□□ -1.96
MSH5-219ENST00000497269 SPINK7P58062 85 aa2.83□□□□□ -1.96
MSH5-219ENST00000497269 LINC00472Q9H8W2 130 aa2.83□□□□□ -1.96
MSH5-219ENST00000497269 TMEM256-PLSCR3K7ERE1 68 aa2.82□□□□□ -1.96
MSH5-219ENST00000497269 PDE6GP18545 87 aa2.82□□□□□ -1.96
MSH5-219ENST00000497269 HIST1H4AP62805 103 aaKnown RBP2.82□□□□□ -1.96
MSH5-219ENST00000497269 ORMDL1Q9P0S3 153 aa2.82□□□□□ -1.96
MSH5-219ENST00000497269 TRBV7-4A0A0J9YYF1 115 aa2.81□□□□□ -1.96
MSH5-219ENST00000497269 FAM236AA0A1B0GUQ0 79 aa2.81□□□□□ -1.96
MSH5-219ENST00000497269 FAM236BA0A1B0GV22 79 aa2.81□□□□□ -1.96
MSH5-219ENST00000497269 Q5W150 140 aa2.81□□□□□ -1.96
MSH5-219ENST00000497269 ZCCHC13Q8WW36 166 aaKnown RBP2.81□□□□□ -1.96
MSH5-219ENST00000497269 COX7CP15954 63 aa2.8□□□□□ -1.96
MSH5-219ENST00000497269 KRTAP19-6Q3LI70 58 aa2.8□□□□□ -1.96
MSH5-219ENST00000497269 WFDC13Q8IUB5 93 aa2.8□□□□□ -1.96
MSH5-219ENST00000497269 LOC110117498A0A087WWA1 95 aa2.79□□□□□ -1.96
MSH5-219ENST00000497269 CCDC179H3BU77 68 aa2.79□□□□□ -1.96
MSH5-219ENST00000497269 TMEM258P61165 79 aa2.79□□□□□ -1.96
MSH5-219ENST00000497269 SMIM20Q8N5G0 67 aa2.79□□□□□ -1.96
MSH5-219ENST00000497269 RPS28P62857 69 aaKnown RBP2.78□□□□□ -1.96
MSH5-219ENST00000497269 SERP2Q8N6R1 65 aa2.78□□□□□ -1.96
MSH5-219ENST00000497269 UBL5Q9BZL1 73 aa2.78□□□□□ -1.96
MSH5-219ENST00000497269 LINC00846Q9NV44 126 aa2.78□□□□□ -1.96
MSH5-219ENST00000497269 A0A1B0GW54 56 aa2.77□□□□□ -1.97
MSH5-219ENST00000497269 C8orf87E5RJ46 101 aa2.77□□□□□ -1.97
MSH5-219ENST00000497269 J3KT08 172 aa2.77□□□□□ -1.97
MSH5-219ENST00000497269 C14orf132Q9NPU4 83 aa2.77□□□□□ -1.97
MSH5-219ENST00000497269 RBM3P98179 157 aaKnown RBP2.76□□□□□ -1.97
MSH5-219ENST00000497269 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
MSH5-219ENST00000497269 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
MSH5-219ENST00000497269 DSCR8Q96T75 97 aa2.76□□□□□ -1.97
MSH5-219ENST00000497269 A8MWP4 228 aa2.75□□□□□ -1.97
MSH5-219ENST00000497269 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
MSH5-219ENST00000497269 C8orf17Q9NRJ1 99 aa2.75□□□□□ -1.97
MSH5-219ENST00000497269 IGKV3D-7A0A0C4DH55 119 aa2.74□□□□□ -1.97
MSH5-219ENST00000497269 NDUFC1O43677 76 aa2.74□□□□□ -1.97
MSH5-219ENST00000497269 NDUFB1O75438 58 aa2.74□□□□□ -1.97
MSH5-219ENST00000497269 ATP5EP56381 51 aaPredicted RBP2.74□□□□□ -1.97
MSH5-219ENST00000497269 Q6ZQT0 140 aa2.74□□□□□ -1.97
MSH5-219ENST00000497269 NDUFS5O43920 106 aa2.73□□□□□ -1.97
MSH5-219ENST00000497269 TRAV7A0A075B6U4 112 aa2.72□□□□□ -1.97
MSH5-219ENST00000497269 H1FX-AS1Q4G0G2 97 aa2.72□□□□□ -1.97
MSH5-219ENST00000497269 KLKP1Q107X0 134 aa2.71□□□□□ -1.98
MSH5-219ENST00000497269 MMP24-AS1A0A0U1RRL7 71 aa2.69□□□□□ -1.98
MSH5-219ENST00000497269 C4orf26Q17RF5 130 aa2.69□□□□□ -1.98
MSH5-219ENST00000497269 MRPL34Q9BQ48 92 aaKnown RBP2.69□□□□□ -1.98
MSH5-219ENST00000497269 A0A087WVE0 104 aa2.68□□□□□ -1.98
MSH5-219ENST00000497269 NREPQ16612 68 aa2.68□□□□□ -1.98
MSH5-219ENST00000497269 PRR15Q8IV56 129 aa2.68□□□□□ -1.98
MSH5-219ENST00000497269 SERP1Q9Y6X1 66 aa2.68□□□□□ -1.98
MSH5-219ENST00000497269 hDV103S1A0JD37 113 aa2.67□□□□□ -1.98
MSH5-219ENST00000497269 A6NN06 94 aa2.67□□□□□ -1.98
MSH5-219ENST00000497269 K7EQZ3 153 aa2.67□□□□□ -1.98
MSH5-219ENST00000497269 H7BZZ5 65 aa2.66□□□□□ -1.98
MSH5-219ENST00000497269 BPY2O14599 106 aa2.66□□□□□ -1.98
MSH5-219ENST00000497269 C20orf197Q8N268 126 aa2.66□□□□□ -1.98
MSH5-219ENST00000497269 TMEM254Q8TBM7 123 aa2.66□□□□□ -1.98
MSH5-219ENST00000497269 MT1BP07438 61 aa2.65□□□□□ -1.99
MSH5-219ENST00000497269 HCG22E2RYF7 251 aa2.64□□□□□ -1.99
MSH5-219ENST00000497269 KRTAP20-1Q3LI63 56 aa2.64□□□□□ -1.99
MSH5-219ENST00000497269 SMIM26A0A096LP01 95 aa2.63□□□□□ -1.99
MSH5-219ENST00000497269 Q5VV11 94 aa2.63□□□□□ -1.99
MSH5-219ENST00000497269 C7orf65Q6ZTY9 151 aa2.63□□□□□ -1.99
MSH5-219ENST00000497269 CYSTM1Q9H1C7 97 aa2.63□□□□□ -1.99
MSH5-219ENST00000497269 MUC12Q9UKN1 5478 aa2.62□□□□□ -1.99
MSH5-219ENST00000497269 NEBP20929 6669 aa2.62□□□□□ -1.99
MSH5-219ENST00000497269 H3BPC8 53 aa2.61□□□□□ -1.99
MSH5-219ENST00000497269 CASC2Q6XLA1 102 aa2.61□□□□□ -1.99
MSH5-219ENST00000497269 S4R3F8 94 aa2.61□□□□□ -1.99
MSH5-219ENST00000497269 LCA10Q71F78 164 aa2.6□□□□□ -1.99
MSH5-219ENST00000497269 C1orf64Q8NEQ6 169 aa2.6□□□□□ -1.99
MSH5-219ENST00000497269 PRO0628Q9UI54 55 aa2.59□□□□□ -1.99
MSH5-219ENST00000497269 KRTAP19-8Q3LI54 63 aa2.58□□□□□ -2
MSH5-219ENST00000497269 CSAG1Q6PB30 78 aa2.58□□□□□ -2
MSH5-219ENST00000497269 CYP4F30PQ9H0H9 118 aa2.58□□□□□ -2
MSH5-219ENST00000497269 SNURFQ9Y675 71 aa2.58□□□□□ -2
MSH5-219ENST00000497269 MP68P56378 58 aa2.57□□□□□ -2
MSH5-219ENST00000497269 SPRR2GQ9BYE4 73 aa2.57□□□□□ -2
MSH5-219ENST00000497269 V9GYY9 64 aa2.57□□□□□ -2
MSH5-219ENST00000497269 SPANXA2-OT1Q8N9U9 137 aa2.56□□□□□ -2
MSH5-219ENST00000497269 KMT2DO14686 5537 aa2.54□□□□□ -2
MSH5-219ENST00000497269 Q1T7F1 81 aa2.54□□□□□ -2
MSH5-219ENST00000497269 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
MSH5-219ENST00000497269 MDN1Q9NU22 5596 aa2.53□□□□□ -2
MSH5-219ENST00000497269 TP53AIP1Q9HCN2 124 aa2.53□□□□□ -2
MSH5-219ENST00000497269 TRAV22A0A0B4J277 110 aa2.52□□□□□ -2.01
MSH5-219ENST00000497269 KRTAP2-3P0C7H8 128 aa2.52□□□□□ -2.01
MSH5-219ENST00000497269 SPRR2EP22531 72 aa2.52□□□□□ -2.01
MSH5-219ENST00000497269 SPRR2BP35325 72 aa2.52□□□□□ -2.01
MSH5-219ENST00000497269 SPRR2AP35326 72 aa2.52□□□□□ -2.01
MSH5-219ENST00000497269 SPRR2FQ96RM1 72 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms