RNA–Protein interactions for RNA: ENST00000497209.5

SLCO4A1-208, Transcript of solute carrier organic anion transporter family member 4A1, humanhuman

TSL 1 (best)

Gene SLCO4A1, Length 3,092 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1-208ENST00000497209 KRTAP10-6P60371 365 aaPredicted RBP7.85□□□□□ -1.15
SLCO4A1-208ENST00000497209 DYNC1H1Q14204 4646 aaKnown RBP7.82□□□□□ -1.16
SLCO4A1-208ENST00000497209 SACSQ9NZJ4 4579 aa7.82□□□□□ -1.16
SLCO4A1-208ENST00000497209 KRTAP15-1Q3LI76 137 aa7.8□□□□□ -1.16
SLCO4A1-208ENST00000497209 RPS29P62273 56 aaKnown RBP7.8□□□□□ -1.16
SLCO4A1-208ENST00000497209 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
SLCO4A1-208ENST00000497209 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
SLCO4A1-208ENST00000497209 KMT2CQ8NEZ4 4911 aaKnown RBP7.74□□□□□ -1.17
SLCO4A1-208ENST00000497209 PKHD1L1Q86WI1 4243 aa7.69□□□□□ -1.18
SLCO4A1-208ENST00000497209 KRTAP12-2P59991 146 aa7.68□□□□□ -1.18
SLCO4A1-208ENST00000497209 MYCBP2O75592 4640 aa7.68□□□□□ -1.18
SLCO4A1-208ENST00000497209 S4R3F8 94 aa7.68□□□□□ -1.18
SLCO4A1-208ENST00000497209 LRP1Q07954 4544 aaKnown RBP7.64□□□□□ -1.19
SLCO4A1-208ENST00000497209 KRTAP10-4P60372 401 aaPredicted RBP7.63□□□□□ -1.19
SLCO4A1-208ENST00000497209 HSPG2P98160 4391 aa7.63□□□□□ -1.19
SLCO4A1-208ENST00000497209 APOBP04114 4563 aaKnown RBP7.62□□□□□ -1.19
SLCO4A1-208ENST00000497209 KRTAP10-8P60410 259 aa7.59□□□□□ -1.19
SLCO4A1-208ENST00000497209 RYR3Q15413 4870 aa7.55□□□□□ -1.2
SLCO4A1-208ENST00000497209 KRTAP12-1P59990 96 aa7.54□□□□□ -1.2
SLCO4A1-208ENST00000497209 FAT3Q8TDW7 4589 aa7.52□□□□□ -1.21
SLCO4A1-208ENST00000497209 A0A1B0GVY2 172 aa7.52□□□□□ -1.21
SLCO4A1-208ENST00000497209 XP32Q5T750 250 aa7.49□□□□□ -1.21
SLCO4A1-208ENST00000497209 RYR2Q92736 4967 aa7.43□□□□□ -1.22
SLCO4A1-208ENST00000497209 A0A0A0MQY5 61 aa7.41□□□□□ -1.22
SLCO4A1-208ENST00000497209 LPAP08519 4548 aa7.38□□□□□ -1.23
SLCO4A1-208ENST00000497209 Q5VSD8 79 aa7.38□□□□□ -1.23
SLCO4A1-208ENST00000497209 TNXBP22105 4242 aa7.37□□□□□ -1.23
SLCO4A1-208ENST00000497209 EPPK1P58107 5090 aaKnown RBP7.31□□□□□ -1.24
SLCO4A1-208ENST00000497209 LRP2P98164 4655 aa7.27□□□□□ -1.25
SLCO4A1-208ENST00000497209 M0QZ58 72 aa7.26□□□□□ -1.25
SLCO4A1-208ENST00000497209 PLAC4Q8WY50 150 aa7.25□□□□□ -1.25
SLCO4A1-208ENST00000497209 LUZP6Q538Z0 58 aa7.22□□□□□ -1.25
SLCO4A1-208ENST00000497209 KRTAP17-1Q9BYP8 105 aa7.22□□□□□ -1.25
SLCO4A1-208ENST00000497209 KIAA1109Q2LD37 5005 aa7.18□□□□□ -1.26
SLCO4A1-208ENST00000497209 RYR1P21817 5038 aa7.12□□□□□ -1.27
SLCO4A1-208ENST00000497209 MT1HL1P0DM35 61 aa7.12□□□□□ -1.27
SLCO4A1-208ENST00000497209 R4GN34 69 aa7.1□□□□□ -1.27
SLCO4A1-208ENST00000497209 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
SLCO4A1-208ENST00000497209 ABCA13Q86UQ4 5058 aa6.98□□□□□ -1.29
SLCO4A1-208ENST00000497209 BIRC6Q9NR09 4857 aa6.86□□□□□ -1.31
SLCO4A1-208ENST00000497209 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
SLCO4A1-208ENST00000497209 CAMK2N1Q7Z7J9 78 aa6.82□□□□□ -1.32
SLCO4A1-208ENST00000497209 PP632Q6XCG6 107 aa6.81□□□□□ -1.32
SLCO4A1-208ENST00000497209 PCLOQ9Y6V0 5065 aa6.81□□□□□ -1.32
SLCO4A1-208ENST00000497209 KRTAP4-1Q9BYQ7 146 aa6.79□□□□□ -1.32
SLCO4A1-208ENST00000497209 HERC2O95714 4834 aa6.78□□□□□ -1.32
SLCO4A1-208ENST00000497209 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
SLCO4A1-208ENST00000497209 MUC2Q02817 5179 aa6.73□□□□□ -1.33
SLCO4A1-208ENST00000497209 MUC17Q685J3 4493 aa6.71□□□□□ -1.33
SLCO4A1-208ENST00000497209 HERC1Q15751 4861 aa6.66□□□□□ -1.34
SLCO4A1-208ENST00000497209 J3QL48 77 aa6.65□□□□□ -1.34
SLCO4A1-208ENST00000497209 SPRR5A0A1B0GTR4 108 aa6.58□□□□□ -1.36
SLCO4A1-208ENST00000497209 TNP1P09430 55 aa6.55□□□□□ -1.36
SLCO4A1-208ENST00000497209 KRTAP19-2Q3LHN2 52 aa6.51□□□□□ -1.37
SLCO4A1-208ENST00000497209 FAT4Q6V0I7 4981 aa6.4□□□□□ -1.39
SLCO4A1-208ENST00000497209 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
SLCO4A1-208ENST00000497209 FLGP20930 4061 aaPredicted RBP6.38□□□□□ -1.39
SLCO4A1-208ENST00000497209 UBR4Q5T4S7 5183 aa6.32□□□□□ -1.4
SLCO4A1-208ENST00000497209 PRO2289Q9P1D8 64 aa6.31□□□□□ -1.4
SLCO4A1-208ENST00000497209 RNF213Q63HN8 5207 aa6.3□□□□□ -1.4
SLCO4A1-208ENST00000497209 M0R2T5 61 aa6.25□□□□□ -1.41
SLCO4A1-208ENST00000497209 HMCN2Q8NDA2 5059 aa6.23□□□□□ -1.41
SLCO4A1-208ENST00000497209 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
SLCO4A1-208ENST00000497209 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
SLCO4A1-208ENST00000497209 INE1O15225 51 aa6.11□□□□□ -1.43
SLCO4A1-208ENST00000497209 LCE2CQ5TA81 110 aa6.09□□□□□ -1.43
SLCO4A1-208ENST00000497209 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
SLCO4A1-208ENST00000497209 SPRR2GQ9BYE4 73 aa6.07□□□□□ -1.44
SLCO4A1-208ENST00000497209 MT1FP04733 61 aa5.97□□□□□ -1.45
SLCO4A1-208ENST00000497209 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.45
SLCO4A1-208ENST00000497209 MT1HP80294 61 aa5.95□□□□□ -1.46
SLCO4A1-208ENST00000497209 MT2AP02795 61 aa5.93□□□□□ -1.46
SLCO4A1-208ENST00000497209 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
SLCO4A1-208ENST00000497209 KRTAP10-12P60413 245 aa5.85□□□□□ -1.47
SLCO4A1-208ENST00000497209 KRTAP9-8Q9BYQ0 159 aa5.82□□□□□ -1.48
SLCO4A1-208ENST00000497209 KRTAP10-5P60370 271 aa5.8□□□□□ -1.48
SLCO4A1-208ENST00000497209 MT1XP80297 61 aa5.79□□□□□ -1.48
SLCO4A1-208ENST00000497209 MT1BP07438 61 aa5.77□□□□□ -1.49
SLCO4A1-208ENST00000497209 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
SLCO4A1-208ENST00000497209 KRTAP19-8Q3LI54 63 aa5.73□□□□□ -1.49
SLCO4A1-208ENST00000497209 KMT2DO14686 5537 aa5.62□□□□□ -1.51
SLCO4A1-208ENST00000497209 USH2AO75445 5202 aa5.61□□□□□ -1.51
SLCO4A1-208ENST00000497209 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
SLCO4A1-208ENST00000497209 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
SLCO4A1-208ENST00000497209 LCE3CQ5T5A8 94 aa5.54□□□□□ -1.52
SLCO4A1-208ENST00000497209 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
SLCO4A1-208ENST00000497209 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
SLCO4A1-208ENST00000497209 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
SLCO4A1-208ENST00000497209 KRTAP4-8Q9BYQ9 185 aa5.42□□□□□ -1.54
SLCO4A1-208ENST00000497209 LCE2BO14633 110 aa5.37□□□□□ -1.55
SLCO4A1-208ENST00000497209 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
SLCO4A1-208ENST00000497209 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
SLCO4A1-208ENST00000497209 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
SLCO4A1-208ENST00000497209 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
SLCO4A1-208ENST00000497209 LCE2AQ5TA79 106 aaPredicted RBP5.32□□□□□ -1.56
SLCO4A1-208ENST00000497209 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.59
SLCO4A1-208ENST00000497209 MT1LQ93083 61 aa5.01□□□□□ -1.61
SLCO4A1-208ENST00000497209 SSPOA2VEC9 5147 aa5.01□□□□□ -1.61
SLCO4A1-208ENST00000497209 MT1EP04732 61 aa4.97□□□□□ -1.61
SLCO4A1-208ENST00000497209 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms