RNA–Protein interactions for RNA: ENST00000496239.5

NECAP2-207, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2

Gene NECAP2, Length 4,619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-207ENST00000496239 LRP1BQ9NZR2 4599 aa5.32□□□□□ -1.56
NECAP2-207ENST00000496239 LUZP6Q538Z0 58 aa5.31□□□□□ -1.56
NECAP2-207ENST00000496239 KRTAP3-1Q9BYR8 98 aa5.25□□□□□ -1.57
NECAP2-207ENST00000496239 DNAH17Q9UFH2 4485 aa5.21□□□□□ -1.57
NECAP2-207ENST00000496239 H0YAA0 97 aa5.17□□□□□ -1.58
NECAP2-207ENST00000496239 BIRC6Q9NR09 4857 aa5.16□□□□□ -1.58
NECAP2-207ENST00000496239 KMT2AQ03164 3969 aa5.15□□□□□ -1.59
NECAP2-207ENST00000496239 RYR2Q92736 4967 aa5.15□□□□□ -1.59
NECAP2-207ENST00000496239 FAT2Q9NYQ8 4349 aa5.14□□□□□ -1.59
NECAP2-207ENST00000496239 DNAH2Q9P225 4427 aa5.14□□□□□ -1.59
NECAP2-207ENST00000496239 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
NECAP2-207ENST00000496239 SACSQ9NZJ4 4579 aa5.13□□□□□ -1.59
NECAP2-207ENST00000496239 CMYA5Q8N3K9 4069 aa5.13□□□□□ -1.59
NECAP2-207ENST00000496239 HERC2O95714 4834 aa5.13□□□□□ -1.59
NECAP2-207ENST00000496239 HYDINQ4G0P3 5121 aa5.13□□□□□ -1.59
NECAP2-207ENST00000496239 KRTAP17-1Q9BYP8 105 aa5.12□□□□□ -1.59
NECAP2-207ENST00000496239 LYSTQ99698 3801 aa5.11□□□□□ -1.59
NECAP2-207ENST00000496239 DYNC2H1Q8NCM8 4307 aaKnown RBP5.1□□□□□ -1.59
NECAP2-207ENST00000496239 DNAH3Q8TD57 4116 aa5.09□□□□□ -1.6
NECAP2-207ENST00000496239 APOBP04114 4563 aaKnown RBP5.05□□□□□ -1.6
NECAP2-207ENST00000496239 KRTAP25-1Q3LHN0 102 aa5.05□□□□□ -1.6
NECAP2-207ENST00000496239 KRTAP4-1Q9BYQ7 146 aa5.03□□□□□ -1.6
NECAP2-207ENST00000496239 KMT2CQ8NEZ4 4911 aaKnown RBP5.03□□□□□ -1.6
NECAP2-207ENST00000496239 PP632Q6XCG6 107 aa5.02□□□□□ -1.61
NECAP2-207ENST00000496239 VPS13BQ7Z7G8 4022 aa5□□□□□ -1.61
NECAP2-207ENST00000496239 KRTAP3-3Q9BYR6 98 aa4.98□□□□□ -1.61
NECAP2-207ENST00000496239 KRTAP3-2Q9BYR7 98 aa4.98□□□□□ -1.61
NECAP2-207ENST00000496239 KRTAP10-6P60371 365 aaPredicted RBP4.96□□□□□ -1.61
NECAP2-207ENST00000496239 DNAH8Q96JB1 4490 aa4.96□□□□□ -1.62
NECAP2-207ENST00000496239 MYCBP2O75592 4640 aa4.96□□□□□ -1.62
NECAP2-207ENST00000496239 KRTAP12-2P59991 146 aa4.96□□□□□ -1.62
NECAP2-207ENST00000496239 C10orf95Q9H7T3 257 aa4.96□□□□□ -1.62
NECAP2-207ENST00000496239 LRP1Q07954 4544 aaKnown RBP4.96□□□□□ -1.62
NECAP2-207ENST00000496239 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
NECAP2-207ENST00000496239 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
NECAP2-207ENST00000496239 MT1HP80294 61 aa4.92□□□□□ -1.62
NECAP2-207ENST00000496239 KRTAP13-4Q3LI77 160 aa4.89□□□□□ -1.63
NECAP2-207ENST00000496239 DNAH6Q9C0G6 4158 aa4.85□□□□□ -1.63
NECAP2-207ENST00000496239 DNAH7Q8WXX0 4024 aa4.85□□□□□ -1.63
NECAP2-207ENST00000496239 PCLOQ9Y6V0 5065 aa4.83□□□□□ -1.64
NECAP2-207ENST00000496239 EPPK1P58107 5090 aaKnown RBP4.83□□□□□ -1.64
NECAP2-207ENST00000496239 PKHD1P08F94 4074 aa4.82□□□□□ -1.64
NECAP2-207ENST00000496239 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
NECAP2-207ENST00000496239 HSPG2P98160 4391 aa4.81□□□□□ -1.64
NECAP2-207ENST00000496239 LRP2P98164 4655 aa4.79□□□□□ -1.64
NECAP2-207ENST00000496239 MT2AP02795 61 aa4.79□□□□□ -1.64
NECAP2-207ENST00000496239 LORP23490 312 aaPredicted RBP4.78□□□□□ -1.64
NECAP2-207ENST00000496239 HERC1Q15751 4861 aa4.74□□□□□ -1.65
NECAP2-207ENST00000496239 ABCA13Q86UQ4 5058 aa4.72□□□□□ -1.65
NECAP2-207ENST00000496239 KRTAP10-12P60413 245 aa4.7□□□□□ -1.66
NECAP2-207ENST00000496239 HECTD4Q9Y4D8 3996 aa4.7□□□□□ -1.66
NECAP2-207ENST00000496239 MT1FP04733 61 aa4.69□□□□□ -1.66
NECAP2-207ENST00000496239 FRAS1Q86XX4 4008 aa4.62□□□□□ -1.67
NECAP2-207ENST00000496239 PKD1P98161 4303 aa4.61□□□□□ -1.67
NECAP2-207ENST00000496239 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
NECAP2-207ENST00000496239 LCE2DQ5TA82 110 aaPredicted RBP4.6□□□□□ -1.67
NECAP2-207ENST00000496239 KRTAP8-1Q8IUC2 63 aa4.6□□□□□ -1.67
NECAP2-207ENST00000496239 SPRR2GQ9BYE4 73 aa4.58□□□□□ -1.68
NECAP2-207ENST00000496239 UBR4Q5T4S7 5183 aa4.53□□□□□ -1.68
NECAP2-207ENST00000496239 LCE2CQ5TA81 110 aa4.51□□□□□ -1.69
NECAP2-207ENST00000496239 PKHD1L1Q86WI1 4243 aa4.5□□□□□ -1.69
NECAP2-207ENST00000496239 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
NECAP2-207ENST00000496239 CRCT1Q9UGL9 99 aa4.47□□□□□ -1.69
NECAP2-207ENST00000496239 LPAP08519 4548 aa4.46□□□□□ -1.7
NECAP2-207ENST00000496239 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
NECAP2-207ENST00000496239 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
NECAP2-207ENST00000496239 LCE2AQ5TA79 106 aaPredicted RBP4.42□□□□□ -1.7
NECAP2-207ENST00000496239 KRTAP19-1Q8IUB9 90 aa4.41□□□□□ -1.7
NECAP2-207ENST00000496239 SPRR2FQ96RM1 72 aa4.41□□□□□ -1.7
NECAP2-207ENST00000496239 RNF213Q63HN8 5207 aa4.4□□□□□ -1.71
NECAP2-207ENST00000496239 FSIP2Q5CZC0 6907 aa4.38□□□□□ -1.71
NECAP2-207ENST00000496239 KRTAP19-8Q3LI54 63 aa4.36□□□□□ -1.71
NECAP2-207ENST00000496239 KRTAP19-2Q3LHN2 52 aa4.35□□□□□ -1.71
NECAP2-207ENST00000496239 KRTAP9-3Q9BYQ3 159 aa4.33□□□□□ -1.72
NECAP2-207ENST00000496239 FAT4Q6V0I7 4981 aa4.32□□□□□ -1.72
NECAP2-207ENST00000496239 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
NECAP2-207ENST00000496239 HMCN2Q8NDA2 5059 aa4.3□□□□□ -1.72
NECAP2-207ENST00000496239 TNXBP22105 4242 aa4.29□□□□□ -1.72
NECAP2-207ENST00000496239 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
NECAP2-207ENST00000496239 MT1BP07438 61 aa4.27□□□□□ -1.73
NECAP2-207ENST00000496239 LCE2BO14633 110 aa4.22□□□□□ -1.73
NECAP2-207ENST00000496239 MUC17Q685J3 4493 aa4.22□□□□□ -1.73
NECAP2-207ENST00000496239 MT1XP80297 61 aa4.18□□□□□ -1.74
NECAP2-207ENST00000496239 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
NECAP2-207ENST00000496239 KRTAP19-5Q3LI72 72 aa4.17□□□□□ -1.74
NECAP2-207ENST00000496239 SPRR2EP22531 72 aa4.17□□□□□ -1.74
NECAP2-207ENST00000496239 SPRR2BP35325 72 aa4.17□□□□□ -1.74
NECAP2-207ENST00000496239 SPRR2AP35326 72 aa4.17□□□□□ -1.74
NECAP2-207ENST00000496239 FLGP20930 4061 aaPredicted RBP4.14□□□□□ -1.75
NECAP2-207ENST00000496239 KRTAP9-6A0A140TA67 174 aa4.12□□□□□ -1.75
NECAP2-207ENST00000496239 MUC2Q02817 5179 aa4.08□□□□□ -1.76
NECAP2-207ENST00000496239 KRTAP4-8A0A0G2JLE6 195 aa4.07□□□□□ -1.76
NECAP2-207ENST00000496239 KRTAP4-8Q9BYQ9 185 aa4.07□□□□□ -1.76
NECAP2-207ENST00000496239 KRTAP19-6Q3LI70 58 aa4.03□□□□□ -1.76
NECAP2-207ENST00000496239 SPRR2DP22532 72 aa4.03□□□□□ -1.76
NECAP2-207ENST00000496239 INE1O15225 51 aa4.02□□□□□ -1.77
NECAP2-207ENST00000496239 KRTAP19-4Q3LI73 84 aa3.93□□□□□ -1.78
NECAP2-207ENST00000496239 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
NECAP2-207ENST00000496239 MT1GP13640 62 aa3.91□□□□□ -1.78
NECAP2-207ENST00000496239 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms