RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 ROMO1P60602 79 aa6.4□□□□□ -1.39
HCN3-204ENST00000496230 KRTAP10-8P60410 259 aa6.39□□□□□ -1.39
HCN3-204ENST00000496230 TNXBP22105 4242 aa6.39□□□□□ -1.39
HCN3-204ENST00000496230 A0A1B0GU69 56 aa6.35□□□□□ -1.39
HCN3-204ENST00000496230 SPATA8Q6RVD6 105 aa6.35□□□□□ -1.39
HCN3-204ENST00000496230 RPS29P62273 56 aaKnown RBP6.35□□□□□ -1.39
HCN3-204ENST00000496230 A8MUU9 505 aa6.34□□□□□ -1.39
HCN3-204ENST00000496230 C20orf166-AS1Q96NR2 134 aa6.34□□□□□ -1.39
HCN3-204ENST00000496230 MT1HL1P0DM35 61 aa6.32□□□□□ -1.4
HCN3-204ENST00000496230 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
HCN3-204ENST00000496230 MUC2Q02817 5179 aa6.31□□□□□ -1.4
HCN3-204ENST00000496230 XP32Q5T750 250 aa6.3□□□□□ -1.4
HCN3-204ENST00000496230 MIR22HGQ0VDD5 57 aa6.29□□□□□ -1.4
HCN3-204ENST00000496230 P0C880 135 aa6.27□□□□□ -1.41
HCN3-204ENST00000496230 J3QL48 77 aa6.25□□□□□ -1.41
HCN3-204ENST00000496230 HERC2O95714 4834 aa6.25□□□□□ -1.41
HCN3-204ENST00000496230 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
HCN3-204ENST00000496230 UQCR11O14957 56 aa6.21□□□□□ -1.41
HCN3-204ENST00000496230 RPL37P61927 97 aaKnown RBP6.2□□□□□ -1.42
HCN3-204ENST00000496230 HERC1Q15751 4861 aa6.16□□□□□ -1.42
HCN3-204ENST00000496230 COX6B2Q6YFQ2 88 aa6.16□□□□□ -1.42
HCN3-204ENST00000496230 PCLOQ9Y6V0 5065 aa6.13□□□□□ -1.43
HCN3-204ENST00000496230 A0A0D9SG42 100 aa6.1□□□□□ -1.43
HCN3-204ENST00000496230 A0A1B0GU33 70 aa6.04□□□□□ -1.44
HCN3-204ENST00000496230 S4R3F8 94 aa6.04□□□□□ -1.44
HCN3-204ENST00000496230 RNF213Q63HN8 5207 aa6.04□□□□□ -1.44
HCN3-204ENST00000496230 NDUFAF8A1L188 74 aa6.03□□□□□ -1.44
HCN3-204ENST00000496230 H0YAA0 97 aa6.01□□□□□ -1.45
HCN3-204ENST00000496230 KRTAP3-3Q9BYR6 98 aa6.01□□□□□ -1.45
HCN3-204ENST00000496230 CRIPTQ9P021 101 aa6□□□□□ -1.45
HCN3-204ENST00000496230 TPRXLQ17RH7 258 aa5.99□□□□□ -1.45
HCN3-204ENST00000496230 KRTAP4-1Q9BYQ7 146 aa5.96□□□□□ -1.46
HCN3-204ENST00000496230 H1FX-AS1Q4G0G2 97 aa5.95□□□□□ -1.46
HCN3-204ENST00000496230 FAT4Q6V0I7 4981 aa5.94□□□□□ -1.46
HCN3-204ENST00000496230 BIRC6Q9NR09 4857 aa5.94□□□□□ -1.46
HCN3-204ENST00000496230 KRTAP13-4Q3LI77 160 aa5.92□□□□□ -1.46
HCN3-204ENST00000496230 SPINT4Q6UDR6 99 aa5.92□□□□□ -1.46
HCN3-204ENST00000496230 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
HCN3-204ENST00000496230 KRTAP10-6P60371 365 aaPredicted RBP5.88□□□□□ -1.47
HCN3-204ENST00000496230 SEC61BP60468 96 aaKnown RBP5.87□□□□□ -1.47
HCN3-204ENST00000496230 KRTAP15-1Q3LI76 137 aa5.87□□□□□ -1.47
HCN3-204ENST00000496230 KRTAP3-2Q9BYR7 98 aa5.84□□□□□ -1.47
HCN3-204ENST00000496230 LUZP6Q538Z0 58 aa5.81□□□□□ -1.48
HCN3-204ENST00000496230 LORP23490 312 aaPredicted RBP5.75□□□□□ -1.49
HCN3-204ENST00000496230 K7ERS5 55 aa5.74□□□□□ -1.49
HCN3-204ENST00000496230 M0QZ58 72 aa5.74□□□□□ -1.49
HCN3-204ENST00000496230 MUC17Q685J3 4493 aa5.73□□□□□ -1.49
HCN3-204ENST00000496230 HMCN2Q8NDA2 5059 aa5.71□□□□□ -1.5
HCN3-204ENST00000496230 KRTAP12-2P59991 146 aa5.71□□□□□ -1.5
HCN3-204ENST00000496230 R4GN34 69 aa5.71□□□□□ -1.5
HCN3-204ENST00000496230 M0R2T5 61 aa5.66□□□□□ -1.5
HCN3-204ENST00000496230 C10orf95Q9H7T3 257 aa5.65□□□□□ -1.5
HCN3-204ENST00000496230 LCE2DQ5TA82 110 aaPredicted RBP5.6□□□□□ -1.51
HCN3-204ENST00000496230 KRTAP12-1P59990 96 aa5.58□□□□□ -1.52
HCN3-204ENST00000496230 KRTAP19-2Q3LHN2 52 aa5.55□□□□□ -1.52
HCN3-204ENST00000496230 FLGP20930 4061 aaPredicted RBP5.49□□□□□ -1.53
HCN3-204ENST00000496230 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.54
HCN3-204ENST00000496230 LCE2CQ5TA81 110 aa5.41□□□□□ -1.54
HCN3-204ENST00000496230 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
HCN3-204ENST00000496230 MT1HP80294 61 aa5.34□□□□□ -1.56
HCN3-204ENST00000496230 FSIP2Q5CZC0 6907 aa5.33□□□□□ -1.56
HCN3-204ENST00000496230 USH2AO75445 5202 aa5.32□□□□□ -1.56
HCN3-204ENST00000496230 MT1FP04733 61 aa5.24□□□□□ -1.57
HCN3-204ENST00000496230 PLAC4Q8WY50 150 aa5.23□□□□□ -1.57
HCN3-204ENST00000496230 MT2AP02795 61 aa5.19□□□□□ -1.58
HCN3-204ENST00000496230 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
HCN3-204ENST00000496230 KRTAP9-8Q9BYQ0 159 aa5.14□□□□□ -1.59
HCN3-204ENST00000496230 KMT2DO14686 5537 aa5.06□□□□□ -1.6
HCN3-204ENST00000496230 TNP1P09430 55 aa5.04□□□□□ -1.6
HCN3-204ENST00000496230 SPRR2GQ9BYE4 73 aa5.04□□□□□ -1.6
HCN3-204ENST00000496230 PRO2289Q9P1D8 64 aa5.01□□□□□ -1.61
HCN3-204ENST00000496230 LCE2AQ5TA79 106 aaPredicted RBP4.99□□□□□ -1.61
HCN3-204ENST00000496230 LCE2BO14633 110 aa4.98□□□□□ -1.61
HCN3-204ENST00000496230 MT1BP07438 61 aa4.92□□□□□ -1.62
HCN3-204ENST00000496230 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
HCN3-204ENST00000496230 LCE3AQ5TA76 89 aa4.89□□□□□ -1.63
HCN3-204ENST00000496230 MT1XP80297 61 aa4.84□□□□□ -1.63
HCN3-204ENST00000496230 KRTAP10-5P60370 271 aa4.84□□□□□ -1.63
HCN3-204ENST00000496230 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
HCN3-204ENST00000496230 KRTAP19-8Q3LI54 63 aa4.8□□□□□ -1.64
HCN3-204ENST00000496230 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
HCN3-204ENST00000496230 SPRR5A0A1B0GTR4 108 aa4.74□□□□□ -1.65
HCN3-204ENST00000496230 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
HCN3-204ENST00000496230 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
HCN3-204ENST00000496230 INE1O15225 51 aa4.72□□□□□ -1.65
HCN3-204ENST00000496230 KRTAP10-12P60413 245 aa4.72□□□□□ -1.65
HCN3-204ENST00000496230 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
HCN3-204ENST00000496230 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
HCN3-204ENST00000496230 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
HCN3-204ENST00000496230 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
HCN3-204ENST00000496230 KRTAP19-5Q3LI72 72 aa4.56□□□□□ -1.68
HCN3-204ENST00000496230 MUC12Q9UKN1 5478 aa4.53□□□□□ -1.68
HCN3-204ENST00000496230 KRTAP8-1Q8IUC2 63 aa4.51□□□□□ -1.69
HCN3-204ENST00000496230 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
HCN3-204ENST00000496230 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
HCN3-204ENST00000496230 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.7
HCN3-204ENST00000496230 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
HCN3-204ENST00000496230 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
HCN3-204ENST00000496230 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
HCN3-204ENST00000496230 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms