RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 NEBP20929 6669 aa3.21□□□□□ -1.9
VPS52-221ENST00000495755 ATP5EP2Q5VTU8 51 aa3.21□□□□□ -1.9
VPS52-221ENST00000495755 A6NN06 94 aa3.2□□□□□ -1.9
VPS52-221ENST00000495755 UQCRQO14949 82 aa3.2□□□□□ -1.9
VPS52-221ENST00000495755 HIST1H4AP62805 103 aaKnown RBP3.19□□□□□ -1.9
VPS52-221ENST00000495755 MDN1Q9NU22 5596 aa3.18□□□□□ -1.9
VPS52-221ENST00000495755 H0Y9P7 68 aa3.18□□□□□ -1.9
VPS52-221ENST00000495755 KRTAP10-5P60370 271 aa3.18□□□□□ -1.9
VPS52-221ENST00000495755 CRIPTQ9P021 101 aa3.18□□□□□ -1.9
VPS52-221ENST00000495755 ATOX1O00244 68 aa3.17□□□□□ -1.9
VPS52-221ENST00000495755 KMT2DO14686 5537 aa3.16□□□□□ -1.9
VPS52-221ENST00000495755 IMUPQ9GZP8 106 aa3.16□□□□□ -1.9
VPS52-221ENST00000495755 H0YAA0 97 aa3.15□□□□□ -1.91
VPS52-221ENST00000495755 NDUFC1O43677 76 aa3.15□□□□□ -1.91
VPS52-221ENST00000495755 LINC00643Q86TS7 51 aa3.15□□□□□ -1.91
VPS52-221ENST00000495755 A8MUN3 132 aa3.13□□□□□ -1.91
VPS52-221ENST00000495755 LINC00208Q96KT6 92 aa3.12□□□□□ -1.91
VPS52-221ENST00000495755 OCR1Q9BZK8 76 aa3.12□□□□□ -1.91
VPS52-221ENST00000495755 MP68P56378 58 aa3.1□□□□□ -1.91
VPS52-221ENST00000495755 ADM2Q7Z4H4 148 aa3.1□□□□□ -1.91
VPS52-221ENST00000495755 A0A1B0GV90 55 aa3.09□□□□□ -1.91
VPS52-221ENST00000495755 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
VPS52-221ENST00000495755 H3BPC8 53 aa3.06□□□□□ -1.92
VPS52-221ENST00000495755 P0C880 135 aa3.04□□□□□ -1.92
VPS52-221ENST00000495755 MT1XP80297 61 aa3.04□□□□□ -1.92
VPS52-221ENST00000495755 DMAC1Q96GE9 116 aa3.04□□□□□ -1.92
VPS52-221ENST00000495755 J3QR89 54 aa3.03□□□□□ -1.92
VPS52-221ENST00000495755 PLAC4Q8WY50 150 aa3.02□□□□□ -1.93
VPS52-221ENST00000495755 KRTAP3-2Q9BYR7 98 aa3.02□□□□□ -1.93
VPS52-221ENST00000495755 PRO2289Q9P1D8 64 aa3.02□□□□□ -1.93
VPS52-221ENST00000495755 SCGB1A1P11684 91 aa3.01□□□□□ -1.93
VPS52-221ENST00000495755 C20orf197Q8N268 126 aa3.01□□□□□ -1.93
VPS52-221ENST00000495755 R4GN34 69 aa3.01□□□□□ -1.93
VPS52-221ENST00000495755 KRTAP20-1Q3LI63 56 aa3□□□□□ -1.93
VPS52-221ENST00000495755 M0QZ58 72 aa2.99□□□□□ -1.93
VPS52-221ENST00000495755 TRAV7A0A075B6U4 112 aa2.97□□□□□ -1.93
VPS52-221ENST00000495755 KRTAP12-2P59991 146 aa2.97□□□□□ -1.93
VPS52-221ENST00000495755 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
VPS52-221ENST00000495755 ACYP2P14621 99 aa2.95□□□□□ -1.94
VPS52-221ENST00000495755 KRTAP8-1Q8IUC2 63 aa2.95□□□□□ -1.94
VPS52-221ENST00000495755 MT-ATP8P03928 68 aa2.94□□□□□ -1.94
VPS52-221ENST00000495755 LINC01554Q52M75 96 aa2.94□□□□□ -1.94
VPS52-221ENST00000495755 SMIM20Q8N5G0 67 aa2.94□□□□□ -1.94
VPS52-221ENST00000495755 KRTAP2-3P0C7H8 128 aa2.93□□□□□ -1.94
VPS52-221ENST00000495755 SPRR2EP22531 72 aa2.93□□□□□ -1.94
VPS52-221ENST00000495755 SPRR2BP35325 72 aa2.93□□□□□ -1.94
VPS52-221ENST00000495755 SPRR2AP35326 72 aa2.93□□□□□ -1.94
VPS52-221ENST00000495755 KRTAP2-4Q9BYR9 128 aa2.93□□□□□ -1.94
VPS52-221ENST00000495755 KRTAP4-8A0A0G2JLE6 195 aa2.92□□□□□ -1.94
VPS52-221ENST00000495755 KRTAP4-8Q9BYQ9 185 aa2.92□□□□□ -1.94
VPS52-221ENST00000495755 LCE1AQ5T7P2 110 aa2.91□□□□□ -1.94
VPS52-221ENST00000495755 SPTSSBQ8NFR3 76 aa2.91□□□□□ -1.94
VPS52-221ENST00000495755 K7ERU9 68 aa2.9□□□□□ -1.95
VPS52-221ENST00000495755 KRTAP10-7P60409 375 aaPredicted RBP2.89□□□□□ -1.95
VPS52-221ENST00000495755 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
VPS52-221ENST00000495755 CHKB-CPT1BH3BT56 60 aa2.88□□□□□ -1.95
VPS52-221ENST00000495755 SNURFQ9Y675 71 aa2.87□□□□□ -1.95
VPS52-221ENST00000495755 SPANXA2-OT1Q8N9U9 137 aa2.86□□□□□ -1.95
VPS52-221ENST00000495755 LOC100996750A0A140TA64 210 aa2.84□□□□□ -1.95
VPS52-221ENST00000495755 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.95
VPS52-221ENST00000495755 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.95
VPS52-221ENST00000495755 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
VPS52-221ENST00000495755 SPRR2DP22532 72 aa2.83□□□□□ -1.96
VPS52-221ENST00000495755 KRTAP13-4Q3LI77 160 aa2.83□□□□□ -1.96
VPS52-221ENST00000495755 SERP2Q8N6R1 65 aa2.82□□□□□ -1.96
VPS52-221ENST00000495755 CAMK2N1Q7Z7J9 78 aa2.77□□□□□ -1.97
VPS52-221ENST00000495755 COA5Q86WW8 74 aa2.77□□□□□ -1.97
VPS52-221ENST00000495755 LCE3BQ5TA77 95 aa2.76□□□□□ -1.97
VPS52-221ENST00000495755 COX7CP15954 63 aa2.72□□□□□ -1.97
VPS52-221ENST00000495755 SEC61GP60059 68 aa2.72□□□□□ -1.97
VPS52-221ENST00000495755 KRTAP19-7Q3SYF9 63 aa2.72□□□□□ -1.97
VPS52-221ENST00000495755 SERP1Q9Y6X1 66 aa2.72□□□□□ -1.97
VPS52-221ENST00000495755 A0A0D9SG42 100 aa2.71□□□□□ -1.98
VPS52-221ENST00000495755 SPATA8Q6RVD6 105 aa2.71□□□□□ -1.98
VPS52-221ENST00000495755 A0A1B0GU33 70 aa2.7□□□□□ -1.98
VPS52-221ENST00000495755 H7BZZ5 65 aa2.7□□□□□ -1.98
VPS52-221ENST00000495755 CYSTM1Q9H1C7 97 aa2.7□□□□□ -1.98
VPS52-221ENST00000495755 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
VPS52-221ENST00000495755 MT1EP04732 61 aa2.69□□□□□ -1.98
VPS52-221ENST00000495755 LCE5AQ5TCM9 118 aa2.69□□□□□ -1.98
VPS52-221ENST00000495755 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
VPS52-221ENST00000495755 KRTAP12-1P59990 96 aa2.68□□□□□ -1.98
VPS52-221ENST00000495755 SPINT4Q6UDR6 99 aa2.68□□□□□ -1.98
VPS52-221ENST00000495755 KRTAP19-3Q7Z4W3 81 aa2.67□□□□□ -1.98
VPS52-221ENST00000495755 KRTAP19-5Q3LI72 72 aa2.63□□□□□ -1.99
VPS52-221ENST00000495755 A0A1B0GU69 56 aa2.62□□□□□ -1.99
VPS52-221ENST00000495755 SMIM26A0A096LP01 95 aa2.61□□□□□ -1.99
VPS52-221ENST00000495755 A8MU10 97 aa2.61□□□□□ -1.99
VPS52-221ENST00000495755 MT1GP13640 62 aa2.61□□□□□ -1.99
VPS52-221ENST00000495755 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
VPS52-221ENST00000495755 ANAPC13Q9BS18 74 aa2.59□□□□□ -1.99
VPS52-221ENST00000495755 KRTAP4-9Q9BYQ8 210 aa2.58□□□□□ -2
VPS52-221ENST00000495755 PP632Q6XCG6 107 aa2.57□□□□□ -2
VPS52-221ENST00000495755 MT1MQ8N339 61 aa2.57□□□□□ -2
VPS52-221ENST00000495755 MT1LQ93083 61 aa2.57□□□□□ -2
VPS52-221ENST00000495755 C10orf95Q9H7T3 257 aa2.57□□□□□ -2
VPS52-221ENST00000495755 CCDC179H3BU77 68 aa2.56□□□□□ -2
VPS52-221ENST00000495755 LCE3AQ5TA76 89 aa2.55□□□□□ -2
VPS52-221ENST00000495755 TNP1P09430 55 aa2.54□□□□□ -2
VPS52-221ENST00000495755 PRR15LQ9BU68 103 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms