RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 PRR15LQ9BU68 103 aa4.73□□□□□ -1.65
EPHA4-213ENST00000495693 PRO0628Q9UI54 55 aa4.73□□□□□ -1.65
EPHA4-213ENST00000495693 LINC01558Q9Y6Z2 57 aa4.73□□□□□ -1.65
EPHA4-213ENST00000495693 KRTAP10-8P60410 259 aa4.72□□□□□ -1.65
EPHA4-213ENST00000495693 SPTSSBQ8NFR3 76 aa4.72□□□□□ -1.65
EPHA4-213ENST00000495693 APOBP04114 4563 aaKnown RBP4.72□□□□□ -1.65
EPHA4-213ENST00000495693 RETNLBQ9BQ08 111 aa4.71□□□□□ -1.66
EPHA4-213ENST00000495693 KRTAP10-6P60371 365 aaPredicted RBP4.69□□□□□ -1.66
EPHA4-213ENST00000495693 C9orf92A6NGG3 77 aa4.68□□□□□ -1.66
EPHA4-213ENST00000495693 PSPHP1O15172 72 aa4.68□□□□□ -1.66
EPHA4-213ENST00000495693 BRK1Q8WUW1 75 aa4.68□□□□□ -1.66
EPHA4-213ENST00000495693 SEC61BP60468 96 aaKnown RBP4.67□□□□□ -1.66
EPHA4-213ENST00000495693 ATP11AUNQ6ZP68 121 aa4.67□□□□□ -1.66
EPHA4-213ENST00000495693 PKHD1P08F94 4074 aa4.66□□□□□ -1.66
EPHA4-213ENST00000495693 Q5VV11 94 aa4.65□□□□□ -1.67
EPHA4-213ENST00000495693 PKHD1L1Q86WI1 4243 aa4.63□□□□□ -1.67
EPHA4-213ENST00000495693 A0A1B0GU69 56 aa4.62□□□□□ -1.67
EPHA4-213ENST00000495693 A6NED7 52 aa4.62□□□□□ -1.67
EPHA4-213ENST00000495693 SEC61GP60059 68 aa4.62□□□□□ -1.67
EPHA4-213ENST00000495693 SPINK7P58062 85 aa4.61□□□□□ -1.67
EPHA4-213ENST00000495693 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
EPHA4-213ENST00000495693 RPL37P61927 97 aaKnown RBP4.61□□□□□ -1.67
EPHA4-213ENST00000495693 KMT2CQ8NEZ4 4911 aaKnown RBP4.6□□□□□ -1.67
EPHA4-213ENST00000495693 FAT1Q14517 4588 aa4.6□□□□□ -1.67
EPHA4-213ENST00000495693 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
EPHA4-213ENST00000495693 COX6B2Q6YFQ2 88 aa4.57□□□□□ -1.68
EPHA4-213ENST00000495693 TPRXLQ17RH7 258 aa4.56□□□□□ -1.68
EPHA4-213ENST00000495693 RYR1P21817 5038 aa4.56□□□□□ -1.68
EPHA4-213ENST00000495693 MT1HL1P0DM35 61 aa4.55□□□□□ -1.68
EPHA4-213ENST00000495693 UQCR11O14957 56 aa4.54□□□□□ -1.68
EPHA4-213ENST00000495693 FLG2Q5D862 2391 aaPredicted RBP4.54□□□□□ -1.68
EPHA4-213ENST00000495693 HSPG2P98160 4391 aa4.52□□□□□ -1.69
EPHA4-213ENST00000495693 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
EPHA4-213ENST00000495693 FAT3Q8TDW7 4589 aa4.49□□□□□ -1.69
EPHA4-213ENST00000495693 RYR3Q15413 4870 aa4.49□□□□□ -1.69
EPHA4-213ENST00000495693 TNXBP22105 4242 aa4.48□□□□□ -1.69
EPHA4-213ENST00000495693 RBM12B-AS1Q9P1G2 102 aa4.47□□□□□ -1.69
EPHA4-213ENST00000495693 MIR22HGQ0VDD5 57 aa4.46□□□□□ -1.7
EPHA4-213ENST00000495693 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
EPHA4-213ENST00000495693 SPATA8Q6RVD6 105 aa4.46□□□□□ -1.7
EPHA4-213ENST00000495693 LCA10Q71F78 164 aa4.46□□□□□ -1.7
EPHA4-213ENST00000495693 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
EPHA4-213ENST00000495693 S4R3F8 94 aa4.43□□□□□ -1.7
EPHA4-213ENST00000495693 H1FX-AS1Q4G0G2 97 aa4.41□□□□□ -1.7
EPHA4-213ENST00000495693 KIAA1109Q2LD37 5005 aa4.39□□□□□ -1.71
EPHA4-213ENST00000495693 A0A1B0GU33 70 aa4.39□□□□□ -1.71
EPHA4-213ENST00000495693 LRP1Q07954 4544 aaKnown RBP4.39□□□□□ -1.71
EPHA4-213ENST00000495693 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
EPHA4-213ENST00000495693 K7ERS5 55 aa4.36□□□□□ -1.71
EPHA4-213ENST00000495693 KTN1-AS1Q86SY8 53 aa4.36□□□□□ -1.71
EPHA4-213ENST00000495693 A6NN06 94 aa4.35□□□□□ -1.71
EPHA4-213ENST00000495693 DMBT1Q9UGM3 2413 aaPredicted RBP4.34□□□□□ -1.72
EPHA4-213ENST00000495693 A8MU10 97 aa4.33□□□□□ -1.72
EPHA4-213ENST00000495693 CSAG1Q6PB30 78 aa4.33□□□□□ -1.72
EPHA4-213ENST00000495693 EPPK1P58107 5090 aaKnown RBP4.32□□□□□ -1.72
EPHA4-213ENST00000495693 H0YAA0 97 aa4.29□□□□□ -1.72
EPHA4-213ENST00000495693 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
EPHA4-213ENST00000495693 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
EPHA4-213ENST00000495693 MYCBP2O75592 4640 aa4.25□□□□□ -1.73
EPHA4-213ENST00000495693 M0QZ58 72 aa4.23□□□□□ -1.73
EPHA4-213ENST00000495693 BIRC6Q9NR09 4857 aa4.22□□□□□ -1.73
EPHA4-213ENST00000495693 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
EPHA4-213ENST00000495693 ADM2Q7Z4H4 148 aa4.2□□□□□ -1.74
EPHA4-213ENST00000495693 HERC2O95714 4834 aa4.19□□□□□ -1.74
EPHA4-213ENST00000495693 P0C880 135 aa4.13□□□□□ -1.75
EPHA4-213ENST00000495693 LRP2P98164 4655 aa4.13□□□□□ -1.75
EPHA4-213ENST00000495693 MUC17Q685J3 4493 aa4.13□□□□□ -1.75
EPHA4-213ENST00000495693 ABCA13Q86UQ4 5058 aa4.13□□□□□ -1.75
EPHA4-213ENST00000495693 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
EPHA4-213ENST00000495693 R4GN34 69 aa4.11□□□□□ -1.75
EPHA4-213ENST00000495693 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
EPHA4-213ENST00000495693 A0A0D9SG42 100 aa4.09□□□□□ -1.75
EPHA4-213ENST00000495693 ROMO1P60602 79 aa4.09□□□□□ -1.75
EPHA4-213ENST00000495693 KRTAP13-4Q3LI77 160 aa4.08□□□□□ -1.76
EPHA4-213ENST00000495693 CRIPTQ9P021 101 aa4.08□□□□□ -1.76
EPHA4-213ENST00000495693 LPAP08519 4548 aa4.07□□□□□ -1.76
EPHA4-213ENST00000495693 KRTAP4-1Q9BYQ7 146 aa4.07□□□□□ -1.76
EPHA4-213ENST00000495693 KRTAP19-2Q3LHN2 52 aa4.03□□□□□ -1.76
EPHA4-213ENST00000495693 SPINT4Q6UDR6 99 aa4.03□□□□□ -1.76
EPHA4-213ENST00000495693 KRTAP12-1P59990 96 aa4.01□□□□□ -1.77
EPHA4-213ENST00000495693 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
EPHA4-213ENST00000495693 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
EPHA4-213ENST00000495693 LINC01554Q52M75 96 aa3.99□□□□□ -1.77
EPHA4-213ENST00000495693 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
EPHA4-213ENST00000495693 KRTAP12-2P59991 146 aa3.98□□□□□ -1.77
EPHA4-213ENST00000495693 HERC1Q15751 4861 aa3.95□□□□□ -1.78
EPHA4-213ENST00000495693 HMCN2Q8NDA2 5059 aa3.92□□□□□ -1.78
EPHA4-213ENST00000495693 PCLOQ9Y6V0 5065 aa3.92□□□□□ -1.78
EPHA4-213ENST00000495693 M0R2T5 61 aa3.9□□□□□ -1.79
EPHA4-213ENST00000495693 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
EPHA4-213ENST00000495693 FLGP20930 4061 aaPredicted RBP3.83□□□□□ -1.8
EPHA4-213ENST00000495693 MT1HP80294 61 aa3.82□□□□□ -1.8
EPHA4-213ENST00000495693 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
EPHA4-213ENST00000495693 PLAC4Q8WY50 150 aa3.81□□□□□ -1.8
EPHA4-213ENST00000495693 SPRR2GQ9BYE4 73 aa3.81□□□□□ -1.8
EPHA4-213ENST00000495693 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
EPHA4-213ENST00000495693 TNP1P09430 55 aa3.75□□□□□ -1.81
EPHA4-213ENST00000495693 KRTAP10-10P60014 251 aa3.75□□□□□ -1.81
EPHA4-213ENST00000495693 C10orf95Q9H7T3 257 aa3.75□□□□□ -1.81
EPHA4-213ENST00000495693 MT2AP02795 61 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms