RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 KRTAP10-2P60368 255 aa3.09□□□□□ -1.91
PHC3-214ENST00000494943 KRTAP10-6P60371 365 aaPredicted RBP3.09□□□□□ -1.91
PHC3-214ENST00000494943 TNP1P09430 55 aa3.08□□□□□ -1.92
PHC3-214ENST00000494943 FAT2Q9NYQ8 4349 aa3.07□□□□□ -1.92
PHC3-214ENST00000494943 KRTAP13-4Q3LI77 160 aa3.07□□□□□ -1.92
PHC3-214ENST00000494943 DNAH2Q9P225 4427 aa3.06□□□□□ -1.92
PHC3-214ENST00000494943 PKD1P98161 4303 aa3.05□□□□□ -1.92
PHC3-214ENST00000494943 TENM3Q9P273 2699 aa3.05□□□□□ -1.92
PHC3-214ENST00000494943 MGAM2Q2M2H8 2515 aa3.04□□□□□ -1.92
PHC3-214ENST00000494943 KRTAP10-8P60410 259 aa3.03□□□□□ -1.92
PHC3-214ENST00000494943 TGP01266 2768 aa3.03□□□□□ -1.92
PHC3-214ENST00000494943 SMR3BP02814 79 aaPredicted RBP3.03□□□□□ -1.92
PHC3-214ENST00000494943 DNAH11Q96DT5 4516 aa3.02□□□□□ -1.93
PHC3-214ENST00000494943 KRTAP3-2Q9BYR7 98 aa3.01□□□□□ -1.93
PHC3-214ENST00000494943 EPPK1P58107 5090 aaKnown RBP3.01□□□□□ -1.93
PHC3-214ENST00000494943 DYNC1H1Q14204 4646 aaKnown RBP3□□□□□ -1.93
PHC3-214ENST00000494943 KRTAP23-1A1A580 65 aa3□□□□□ -1.93
PHC3-214ENST00000494943 BIRC6Q9NR09 4857 aa2.99□□□□□ -1.93
PHC3-214ENST00000494943 J3QL48 77 aa2.98□□□□□ -1.93
PHC3-214ENST00000494943 Q5VSD8 79 aa2.97□□□□□ -1.93
PHC3-214ENST00000494943 KRTAP17-1Q9BYP8 105 aa2.97□□□□□ -1.93
PHC3-214ENST00000494943 PKHD1L1Q86WI1 4243 aa2.97□□□□□ -1.93
PHC3-214ENST00000494943 DNAH5Q8TE73 4624 aa2.97□□□□□ -1.93
PHC3-214ENST00000494943 VPS13BQ7Z7G8 4022 aa2.96□□□□□ -1.94
PHC3-214ENST00000494943 NOTCH1P46531 2555 aa2.96□□□□□ -1.94
PHC3-214ENST00000494943 HERC2O95714 4834 aa2.96□□□□□ -1.94
PHC3-214ENST00000494943 KRTAP3-3Q9BYR6 98 aa2.95□□□□□ -1.94
PHC3-214ENST00000494943 FLG2Q5D862 2391 aaPredicted RBP2.95□□□□□ -1.94
PHC3-214ENST00000494943 PKHD1P08F94 4074 aa2.95□□□□□ -1.94
PHC3-214ENST00000494943 STAB2Q8WWQ8 2551 aa2.9□□□□□ -1.95
PHC3-214ENST00000494943 APOBP04114 4563 aaKnown RBP2.89□□□□□ -1.95
PHC3-214ENST00000494943 TNXBP22105 4242 aa2.88□□□□□ -1.95
PHC3-214ENST00000494943 HSPG2P98160 4391 aa2.88□□□□□ -1.95
PHC3-214ENST00000494943 RYR1P21817 5038 aa2.88□□□□□ -1.95
PHC3-214ENST00000494943 FAT3Q8TDW7 4589 aa2.86□□□□□ -1.95
PHC3-214ENST00000494943 LRP1BQ9NZR2 4599 aa2.86□□□□□ -1.95
PHC3-214ENST00000494943 ABCA13Q86UQ4 5058 aa2.83□□□□□ -1.96
PHC3-214ENST00000494943 A0A1B0GVY2 172 aa2.83□□□□□ -1.96
PHC3-214ENST00000494943 PCLOQ9Y6V0 5065 aa2.83□□□□□ -1.96
PHC3-214ENST00000494943 MYCBP2O75592 4640 aa2.81□□□□□ -1.96
PHC3-214ENST00000494943 KIAA1109Q2LD37 5005 aa2.79□□□□□ -1.96
PHC3-214ENST00000494943 DMBT1Q9UGM3 2413 aaPredicted RBP2.77□□□□□ -1.97
PHC3-214ENST00000494943 FAT1Q14517 4588 aa2.74□□□□□ -1.97
PHC3-214ENST00000494943 LRP1Q07954 4544 aaKnown RBP2.74□□□□□ -1.97
PHC3-214ENST00000494943 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
PHC3-214ENST00000494943 KRTAP10-4P60372 401 aaPredicted RBP2.67□□□□□ -1.98
PHC3-214ENST00000494943 M0R2T5 61 aa2.67□□□□□ -1.98
PHC3-214ENST00000494943 KRTAP4-5Q9BYR2 181 aa2.64□□□□□ -1.99
PHC3-214ENST00000494943 HMCN2Q8NDA2 5059 aa2.63□□□□□ -1.99
PHC3-214ENST00000494943 HERC1Q15751 4861 aa2.62□□□□□ -1.99
PHC3-214ENST00000494943 MUC17Q685J3 4493 aa2.55□□□□□ -2
PHC3-214ENST00000494943 LCE3AQ5TA76 89 aa2.55□□□□□ -2
PHC3-214ENST00000494943 FLGP20930 4061 aaPredicted RBP2.55□□□□□ -2
PHC3-214ENST00000494943 LPAP08519 4548 aa2.55□□□□□ -2
PHC3-214ENST00000494943 LORP23490 312 aaPredicted RBP2.53□□□□□ -2
PHC3-214ENST00000494943 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
PHC3-214ENST00000494943 MT1HL1P0DM35 61 aa2.51□□□□□ -2.01
PHC3-214ENST00000494943 KRTAP10-12P60413 245 aa2.5□□□□□ -2.01
PHC3-214ENST00000494943 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
PHC3-214ENST00000494943 KRTAP8-1Q8IUC2 63 aa2.46□□□□□ -2.02
PHC3-214ENST00000494943 KRTAP19-4Q3LI73 84 aa2.45□□□□□ -2.02
PHC3-214ENST00000494943 UBR4Q5T4S7 5183 aa2.44□□□□□ -2.02
PHC3-214ENST00000494943 RNF213Q63HN8 5207 aa2.41□□□□□ -2.02
PHC3-214ENST00000494943 SPRR2GQ9BYE4 73 aa2.4□□□□□ -2.03
PHC3-214ENST00000494943 LRP2P98164 4655 aa2.39□□□□□ -2.03
PHC3-214ENST00000494943 KRTAP19-2Q3LHN2 52 aa2.37□□□□□ -2.03
PHC3-214ENST00000494943 LCE3CQ5T5A8 94 aa2.34□□□□□ -2.03
PHC3-214ENST00000494943 LCE2AQ5TA79 106 aaPredicted RBP2.32□□□□□ -2.04
PHC3-214ENST00000494943 FAT4Q6V0I7 4981 aa2.31□□□□□ -2.04
PHC3-214ENST00000494943 MUC2Q02817 5179 aa2.28□□□□□ -2.04
PHC3-214ENST00000494943 KRTAP4-1Q9BYQ7 146 aa2.24□□□□□ -2.05
PHC3-214ENST00000494943 LCE2CQ5TA81 110 aa2.24□□□□□ -2.05
PHC3-214ENST00000494943 KRTAP19-8Q3LI54 63 aa2.23□□□□□ -2.05
PHC3-214ENST00000494943 KRTAP10-5P60370 271 aa2.23□□□□□ -2.05
PHC3-214ENST00000494943 LOC100996750A0A140TA64 210 aa2.2□□□□□ -2.06
PHC3-214ENST00000494943 KRTAP4-6Q9BYQ5 205 aa2.2□□□□□ -2.06
PHC3-214ENST00000494943 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
PHC3-214ENST00000494943 LCE2DQ5TA82 110 aaPredicted RBP2.19□□□□□ -2.06
PHC3-214ENST00000494943 KRTAP19-1Q8IUB9 90 aa2.18□□□□□ -2.06
PHC3-214ENST00000494943 KRTAP2-3P0C7H8 128 aa2.15□□□□□ -2.07
PHC3-214ENST00000494943 KRTAP2-4Q9BYR9 128 aa2.15□□□□□ -2.07
PHC3-214ENST00000494943 KRTAP2-1Q9BYU5 128 aa2.15□□□□□ -2.07
PHC3-214ENST00000494943 MT2AP02795 61 aa2.15□□□□□ -2.07
PHC3-214ENST00000494943 MT1XP80297 61 aa2.14□□□□□ -2.07
PHC3-214ENST00000494943 KRTAP9-2Q9BYQ4 174 aa2.12□□□□□ -2.07
PHC3-214ENST00000494943 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
PHC3-214ENST00000494943 MT1HP80294 61 aa2.1□□□□□ -2.07
PHC3-214ENST00000494943 MT1FP04733 61 aa2.1□□□□□ -2.07
PHC3-214ENST00000494943 KRTAP10-7P60409 375 aaPredicted RBP2.1□□□□□ -2.07
PHC3-214ENST00000494943 MT1BP07438 61 aa2.06□□□□□ -2.08
PHC3-214ENST00000494943 KRTAP9-8Q9BYQ0 159 aa2.05□□□□□ -2.08
PHC3-214ENST00000494943 KRTAP9-6A0A140TA67 174 aa2.04□□□□□ -2.08
PHC3-214ENST00000494943 SSPOA2VEC9 5147 aa2.03□□□□□ -2.08
PHC3-214ENST00000494943 USH2AO75445 5202 aa2.01□□□□□ -2.09
PHC3-214ENST00000494943 MT1EP04732 61 aa2□□□□□ -2.09
PHC3-214ENST00000494943 CRCT1Q9UGL9 99 aa1.99□□□□□ -2.09
PHC3-214ENST00000494943 KRTAP9-3Q9BYQ3 159 aa1.99□□□□□ -2.09
PHC3-214ENST00000494943 MT1LQ93083 61 aa1.98□□□□□ -2.09
PHC3-214ENST00000494943 LCE3EQ5T5B0 92 aa1.97□□□□□ -2.09
PHC3-214ENST00000494943 LCE2BO14633 110 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms