RNA–Protein interactions for RNA: ENST00000494062.2

SPART-209, Transcript of spartin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPART, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPART-209ENST00000494062 MIR22HGQ0VDD5 57 aa9.58□□□□□ -0.88
SPART-209ENST00000494062 UQCR11O14957 56 aa9.58□□□□□ -0.88
SPART-209ENST00000494062 ABCA13Q86UQ4 5058 aa9.57□□□□□ -0.88
SPART-209ENST00000494062 A6NN06 94 aa9.5□□□□□ -0.89
SPART-209ENST00000494062 SPATA8Q6RVD6 105 aa9.47□□□□□ -0.89
SPART-209ENST00000494062 A0A1B0GU33 70 aa9.38□□□□□ -0.91
SPART-209ENST00000494062 KTN1-AS1Q86SY8 53 aa9.38□□□□□ -0.91
SPART-209ENST00000494062 H0YAA0 97 aa9.37□□□□□ -0.91
SPART-209ENST00000494062 ADM2Q7Z4H4 148 aa9.34□□□□□ -0.91
SPART-209ENST00000494062 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
SPART-209ENST00000494062 S4R3F8 94 aa9.33□□□□□ -0.92
SPART-209ENST00000494062 HERC2O95714 4834 aa9.32□□□□□ -0.92
SPART-209ENST00000494062 PRAC1Q96KF2 57 aa9.32□□□□□ -0.92
SPART-209ENST00000494062 J3QL48 77 aa9.31□□□□□ -0.92
SPART-209ENST00000494062 H1FX-AS1Q4G0G2 97 aa9.31□□□□□ -0.92
SPART-209ENST00000494062 TPRXLQ17RH7 258 aa9.3□□□□□ -0.92
SPART-209ENST00000494062 A0A0D9SG42 100 aa9.21□□□□□ -0.93
SPART-209ENST00000494062 P0C880 135 aa9.17□□□□□ -0.94
SPART-209ENST00000494062 KRTAP10-6P60371 365 aaPredicted RBP9.17□□□□□ -0.94
SPART-209ENST00000494062 RBM12B-AS1Q9P1G2 102 aa9.16□□□□□ -0.94
SPART-209ENST00000494062 KRTAP13-4Q3LI77 160 aa9.13□□□□□ -0.95
SPART-209ENST00000494062 KRTAP3-2Q9BYR7 98 aa9.12□□□□□ -0.95
SPART-209ENST00000494062 MUC2Q02817 5179 aa9.09□□□□□ -0.95
SPART-209ENST00000494062 KRTAP4-1Q9BYQ7 146 aa9.04□□□□□ -0.96
SPART-209ENST00000494062 CSAG1Q6PB30 78 aa9.03□□□□□ -0.96
SPART-209ENST00000494062 BIRC6Q9NR09 4857 aa9.03□□□□□ -0.96
SPART-209ENST00000494062 SEC61BP60468 96 aaKnown RBP9.02□□□□□ -0.97
SPART-209ENST00000494062 CRIPTQ9P021 101 aa9.01□□□□□ -0.97
SPART-209ENST00000494062 HERC1Q15751 4861 aa9□□□□□ -0.97
SPART-209ENST00000494062 K7ERS5 55 aa8.97□□□□□ -0.97
SPART-209ENST00000494062 PCLOQ9Y6V0 5065 aa8.93□□□□□ -0.98
SPART-209ENST00000494062 MUC17Q685J3 4493 aa8.93□□□□□ -0.98
SPART-209ENST00000494062 LINC01554Q52M75 96 aa8.88□□□□□ -0.99
SPART-209ENST00000494062 SPINT4Q6UDR6 99 aa8.88□□□□□ -0.99
SPART-209ENST00000494062 KRTAP12-2P59991 146 aa8.81□□□□□ -1
SPART-209ENST00000494062 M0QZ58 72 aa8.77□□□□□ -1.01
SPART-209ENST00000494062 LORP23490 312 aaPredicted RBP8.73□□□□□ -1.01
SPART-209ENST00000494062 R4GN34 69 aa8.72□□□□□ -1.01
SPART-209ENST00000494062 ROMO1P60602 79 aa8.71□□□□□ -1.02
SPART-209ENST00000494062 KRTAP12-1P59990 96 aa8.7□□□□□ -1.02
SPART-209ENST00000494062 FAT4Q6V0I7 4981 aa8.67□□□□□ -1.02
SPART-209ENST00000494062 HMCN2Q8NDA2 5059 aa8.67□□□□□ -1.02
SPART-209ENST00000494062 KRTAP25-1Q3LHN0 102 aa8.65□□□□□ -1.02
SPART-209ENST00000494062 KRTAP19-2Q3LHN2 52 aa8.64□□□□□ -1.03
SPART-209ENST00000494062 C10orf95Q9H7T3 257 aa8.62□□□□□ -1.03
SPART-209ENST00000494062 RNF213Q63HN8 5207 aa8.6□□□□□ -1.03
SPART-209ENST00000494062 UBR4Q5T4S7 5183 aa8.52□□□□□ -1.04
SPART-209ENST00000494062 FLGP20930 4061 aaPredicted RBP8.47□□□□□ -1.05
SPART-209ENST00000494062 M0R2T5 61 aa8.37□□□□□ -1.07
SPART-209ENST00000494062 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
SPART-209ENST00000494062 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
SPART-209ENST00000494062 MT1HP80294 61 aa8.14□□□□□ -1.11
SPART-209ENST00000494062 KRTAP10-10P60014 251 aa8.05□□□□□ -1.12
SPART-209ENST00000494062 MT1FP04733 61 aa7.98□□□□□ -1.13
SPART-209ENST00000494062 KRTAP19-1Q8IUB9 90 aa7.96□□□□□ -1.13
SPART-209ENST00000494062 MT2AP02795 61 aa7.95□□□□□ -1.14
SPART-209ENST00000494062 PLAC4Q8WY50 150 aa7.91□□□□□ -1.14
SPART-209ENST00000494062 KRTAP9-8Q9BYQ0 159 aa7.88□□□□□ -1.15
SPART-209ENST00000494062 SPRR2GQ9BYE4 73 aa7.88□□□□□ -1.15
SPART-209ENST00000494062 TNP1P09430 55 aa7.81□□□□□ -1.16
SPART-209ENST00000494062 KRTAP15-1Q3LI76 137 aa7.78□□□□□ -1.16
SPART-209ENST00000494062 NDUFAF8A1L188 74 aa7.68□□□□□ -1.18
SPART-209ENST00000494062 PP632Q6XCG6 107 aa7.65□□□□□ -1.18
SPART-209ENST00000494062 H3BS24 57 aa7.63□□□□□ -1.19
SPART-209ENST00000494062 USH2AO75445 5202 aa7.61□□□□□ -1.19
SPART-209ENST00000494062 MT1BP07438 61 aa7.59□□□□□ -1.19
SPART-209ENST00000494062 KRTAP9-3Q9BYQ3 159 aa7.54□□□□□ -1.2
SPART-209ENST00000494062 KRTAP19-8Q3LI54 63 aa7.54□□□□□ -1.2
SPART-209ENST00000494062 LCE3AQ5TA76 89 aa7.52□□□□□ -1.21
SPART-209ENST00000494062 MT1XP80297 61 aa7.47□□□□□ -1.21
SPART-209ENST00000494062 KRTAP10-5P60370 271 aa7.47□□□□□ -1.21
SPART-209ENST00000494062 LCE2BO14633 110 aa7.38□□□□□ -1.23
SPART-209ENST00000494062 KRTAP10-7P60409 375 aaPredicted RBP7.34□□□□□ -1.23
SPART-209ENST00000494062 LCE2AQ5TA79 106 aaPredicted RBP7.32□□□□□ -1.24
SPART-209ENST00000494062 KRTAP23-1A1A580 65 aa7.31□□□□□ -1.24
SPART-209ENST00000494062 KMT2DO14686 5537 aa7.31□□□□□ -1.24
SPART-209ENST00000494062 KRTAP10-12P60413 245 aa7.27□□□□□ -1.24
SPART-209ENST00000494062 LUZP6Q538Z0 58 aa7.27□□□□□ -1.25
SPART-209ENST00000494062 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
SPART-209ENST00000494062 PRO2289Q9P1D8 64 aa7.2□□□□□ -1.26
SPART-209ENST00000494062 KRTAP8-1Q8IUC2 63 aa7.13□□□□□ -1.27
SPART-209ENST00000494062 KRTAP12-3P60328 96 aa7.12□□□□□ -1.27
SPART-209ENST00000494062 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
SPART-209ENST00000494062 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
SPART-209ENST00000494062 SPRR5A0A1B0GTR4 108 aa6.99□□□□□ -1.29
SPART-209ENST00000494062 KRTAP19-5Q3LI72 72 aa6.97□□□□□ -1.29
SPART-209ENST00000494062 SSPOA2VEC9 5147 aa6.93□□□□□ -1.3
SPART-209ENST00000494062 KRTAP4-7Q9BYR0 210 aa6.66□□□□□ -1.34
SPART-209ENST00000494062 KRTAP19-7Q3SYF9 63 aa6.65□□□□□ -1.34
SPART-209ENST00000494062 LCE3CQ5T5A8 94 aa6.63□□□□□ -1.35
SPART-209ENST00000494062 A0A0A0MQY5 61 aa6.63□□□□□ -1.35
SPART-209ENST00000494062 KRTAP19-6Q3LI70 58 aa6.55□□□□□ -1.36
SPART-209ENST00000494062 FCGBPQ9Y6R7 5405 aaPredicted RBP6.55□□□□□ -1.36
SPART-209ENST00000494062 MUC12Q9UKN1 5478 aa6.53□□□□□ -1.36
SPART-209ENST00000494062 MT1EP04732 61 aa6.47□□□□□ -1.37
SPART-209ENST00000494062 KRTAP9-6A8MVA2 160 aa6.47□□□□□ -1.37
SPART-209ENST00000494062 MT1LQ93083 61 aa6.43□□□□□ -1.38
SPART-209ENST00000494062 DSTQ03001 7570 aaKnown RBP6.34□□□□□ -1.39
SPART-209ENST00000494062 KRTAP4-3Q9BYR4 195 aa6.32□□□□□ -1.4
SPART-209ENST00000494062 MACF1Q9UPN3 7388 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms