RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 XP32Q5T750 250 aa9.86□□□□□ -0.83
TSC22D4-205ENST00000493217 MT1HL1P0DM35 61 aa9.84□□□□□ -0.83
TSC22D4-205ENST00000493217 EPPK1P58107 5090 aaKnown RBP9.72□□□□□ -0.85
TSC22D4-205ENST00000493217 A0A1B0GU33 70 aa9.7□□□□□ -0.86
TSC22D4-205ENST00000493217 H0YAA0 97 aa9.7□□□□□ -0.86
TSC22D4-205ENST00000493217 H1FX-AS1Q4G0G2 97 aa9.66□□□□□ -0.86
TSC22D4-205ENST00000493217 KRTAP3-3Q9BYR6 98 aa9.65□□□□□ -0.86
TSC22D4-205ENST00000493217 TPRXLQ17RH7 258 aa9.59□□□□□ -0.87
TSC22D4-205ENST00000493217 RBM12B-AS1Q9P1G2 102 aa9.59□□□□□ -0.87
TSC22D4-205ENST00000493217 LPAP08519 4548 aa9.56□□□□□ -0.88
TSC22D4-205ENST00000493217 S4R3F8 94 aa9.55□□□□□ -0.88
TSC22D4-205ENST00000493217 LRP2P98164 4655 aa9.55□□□□□ -0.88
TSC22D4-205ENST00000493217 ADM2Q7Z4H4 148 aa9.54□□□□□ -0.88
TSC22D4-205ENST00000493217 PRAC1Q96KF2 57 aa9.51□□□□□ -0.89
TSC22D4-205ENST00000493217 KRTAP10-6P60371 365 aaPredicted RBP9.51□□□□□ -0.89
TSC22D4-205ENST00000493217 KRTAP4-5Q9BYR2 181 aa9.51□□□□□ -0.89
TSC22D4-205ENST00000493217 ABCA13Q86UQ4 5058 aa9.5□□□□□ -0.89
TSC22D4-205ENST00000493217 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
TSC22D4-205ENST00000493217 KRTAP13-4Q3LI77 160 aa9.36□□□□□ -0.91
TSC22D4-205ENST00000493217 P0C880 135 aa9.32□□□□□ -0.92
TSC22D4-205ENST00000493217 K7ERS5 55 aa9.3□□□□□ -0.92
TSC22D4-205ENST00000493217 CSAG1Q6PB30 78 aa9.28□□□□□ -0.92
TSC22D4-205ENST00000493217 A0A0D9SG42 100 aa9.21□□□□□ -0.93
TSC22D4-205ENST00000493217 SEC61BP60468 96 aaKnown RBP9.2□□□□□ -0.94
TSC22D4-205ENST00000493217 HERC2O95714 4834 aa9.18□□□□□ -0.94
TSC22D4-205ENST00000493217 J3QL48 77 aa9.17□□□□□ -0.94
TSC22D4-205ENST00000493217 MUC17Q685J3 4493 aa9.16□□□□□ -0.94
TSC22D4-205ENST00000493217 LINC01554Q52M75 96 aa9.15□□□□□ -0.94
TSC22D4-205ENST00000493217 KRTAP4-1Q9BYQ7 146 aa9.09□□□□□ -0.95
TSC22D4-205ENST00000493217 KRTAP25-1Q3LHN0 102 aa9.08□□□□□ -0.96
TSC22D4-205ENST00000493217 ROMO1P60602 79 aa9.08□□□□□ -0.96
TSC22D4-205ENST00000493217 M0QZ58 72 aa9.04□□□□□ -0.96
TSC22D4-205ENST00000493217 KRTAP12-2P59991 146 aa9.03□□□□□ -0.96
TSC22D4-205ENST00000493217 KRTAP12-1P59990 96 aa9□□□□□ -0.97
TSC22D4-205ENST00000493217 BIRC6Q9NR09 4857 aa8.98□□□□□ -0.97
TSC22D4-205ENST00000493217 CRIPTQ9P021 101 aa8.96□□□□□ -0.97
TSC22D4-205ENST00000493217 KRTAP19-2Q3LHN2 52 aa8.95□□□□□ -0.98
TSC22D4-205ENST00000493217 SPINT4Q6UDR6 99 aa8.93□□□□□ -0.98
TSC22D4-205ENST00000493217 H3BS24 57 aa8.9□□□□□ -0.98
TSC22D4-205ENST00000493217 MUC2Q02817 5179 aa8.86□□□□□ -0.99
TSC22D4-205ENST00000493217 R4GN34 69 aa8.85□□□□□ -0.99
TSC22D4-205ENST00000493217 LORP23490 312 aaPredicted RBP8.8□□□□□ -1
TSC22D4-205ENST00000493217 PCLOQ9Y6V0 5065 aa8.74□□□□□ -1.01
TSC22D4-205ENST00000493217 HERC1Q15751 4861 aa8.74□□□□□ -1.01
TSC22D4-205ENST00000493217 FLGP20930 4061 aaPredicted RBP8.73□□□□□ -1.01
TSC22D4-205ENST00000493217 C10orf95Q9H7T3 257 aa8.71□□□□□ -1.01
TSC22D4-205ENST00000493217 HMCN2Q8NDA2 5059 aa8.69□□□□□ -1.02
TSC22D4-205ENST00000493217 LCE2CQ5TA81 110 aa8.47□□□□□ -1.05
TSC22D4-205ENST00000493217 FAT4Q6V0I7 4981 aa8.41□□□□□ -1.06
TSC22D4-205ENST00000493217 CAMK2N1Q7Z7J9 78 aa8.36□□□□□ -1.07
TSC22D4-205ENST00000493217 UBR4Q5T4S7 5183 aa8.31□□□□□ -1.08
TSC22D4-205ENST00000493217 RNF213Q63HN8 5207 aa8.3□□□□□ -1.08
TSC22D4-205ENST00000493217 KRTAP15-1Q3LI76 137 aa8.24□□□□□ -1.09
TSC22D4-205ENST00000493217 MT1HP80294 61 aa8.23□□□□□ -1.09
TSC22D4-205ENST00000493217 SPRR2GQ9BYE4 73 aa8.2□□□□□ -1.1
TSC22D4-205ENST00000493217 M0R2T5 61 aa8.2□□□□□ -1.1
TSC22D4-205ENST00000493217 KRTAP19-1Q8IUB9 90 aa8.16□□□□□ -1.1
TSC22D4-205ENST00000493217 PP632Q6XCG6 107 aa8.13□□□□□ -1.11
TSC22D4-205ENST00000493217 MT2AP02795 61 aa8.06□□□□□ -1.12
TSC22D4-205ENST00000493217 MT1FP04733 61 aa8.05□□□□□ -1.12
TSC22D4-205ENST00000493217 KRTAP9-8Q9BYQ0 159 aa8.05□□□□□ -1.12
TSC22D4-205ENST00000493217 TNP1P09430 55 aa8.04□□□□□ -1.12
TSC22D4-205ENST00000493217 PLAC4Q8WY50 150 aa8.03□□□□□ -1.12
TSC22D4-205ENST00000493217 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
TSC22D4-205ENST00000493217 KRTAP23-1A1A580 65 aa7.96□□□□□ -1.14
TSC22D4-205ENST00000493217 A0A0A0MQY5 61 aa7.93□□□□□ -1.14
TSC22D4-205ENST00000493217 NDUFAF8A1L188 74 aa7.9□□□□□ -1.15
TSC22D4-205ENST00000493217 KRTAP19-8Q3LI54 63 aa7.87□□□□□ -1.15
TSC22D4-205ENST00000493217 MT1BP07438 61 aa7.75□□□□□ -1.17
TSC22D4-205ENST00000493217 KRTAP9-3Q9BYQ3 159 aa7.71□□□□□ -1.17
TSC22D4-205ENST00000493217 KRTAP10-5P60370 271 aa7.66□□□□□ -1.18
TSC22D4-205ENST00000493217 MT1XP80297 61 aa7.65□□□□□ -1.18
TSC22D4-205ENST00000493217 LCE3AQ5TA76 89 aa7.64□□□□□ -1.19
TSC22D4-205ENST00000493217 LUZP6Q538Z0 58 aa7.54□□□□□ -1.2
TSC22D4-205ENST00000493217 SPRR5A0A1B0GTR4 108 aa7.53□□□□□ -1.2
TSC22D4-205ENST00000493217 KRTAP8-1Q8IUC2 63 aa7.5□□□□□ -1.21
TSC22D4-205ENST00000493217 LCE2AQ5TA79 106 aaPredicted RBP7.45□□□□□ -1.22
TSC22D4-205ENST00000493217 LCE2BO14633 110 aa7.42□□□□□ -1.22
TSC22D4-205ENST00000493217 KRTAP10-12P60413 245 aa7.42□□□□□ -1.22
TSC22D4-205ENST00000493217 KRTAP10-7P60409 375 aaPredicted RBP7.41□□□□□ -1.22
TSC22D4-205ENST00000493217 PRO2289Q9P1D8 64 aa7.4□□□□□ -1.23
TSC22D4-205ENST00000493217 KRTAP12-3P60328 96 aa7.3□□□□□ -1.24
TSC22D4-205ENST00000493217 USH2AO75445 5202 aa7.3□□□□□ -1.24
TSC22D4-205ENST00000493217 KMT2DO14686 5537 aa7.07□□□□□ -1.28
TSC22D4-205ENST00000493217 KRTAP19-5Q3LI72 72 aa7.05□□□□□ -1.28
TSC22D4-205ENST00000493217 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
TSC22D4-205ENST00000493217 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
TSC22D4-205ENST00000493217 LCE3CQ5T5A8 94 aa6.87□□□□□ -1.31
TSC22D4-205ENST00000493217 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
TSC22D4-205ENST00000493217 KRTAP19-7Q3SYF9 63 aa6.83□□□□□ -1.32
TSC22D4-205ENST00000493217 KRTAP19-6Q3LI70 58 aa6.75□□□□□ -1.33
TSC22D4-205ENST00000493217 FSIP2Q5CZC0 6907 aa6.67□□□□□ -1.34
TSC22D4-205ENST00000493217 MT1EP04732 61 aa6.64□□□□□ -1.35
TSC22D4-205ENST00000493217 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
TSC22D4-205ENST00000493217 KRTAP9-6A8MVA2 160 aa6.61□□□□□ -1.35
TSC22D4-205ENST00000493217 MT1LQ93083 61 aa6.61□□□□□ -1.35
TSC22D4-205ENST00000493217 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
TSC22D4-205ENST00000493217 LCE2DQ5TA82 110 aaPredicted RBP6.46□□□□□ -1.38
TSC22D4-205ENST00000493217 INE1O15225 51 aa6.43□□□□□ -1.38
TSC22D4-205ENST00000493217 FCGBPQ9Y6R7 5405 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms