RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 UBL5Q9BZL1 73 aa8.37□□□□□ -1.07
CHD1L-209ENST00000492728 MT-ATP8P03928 68 aa8.35□□□□□ -1.07
CHD1L-209ENST00000492728 S4R3F8 94 aa8.35□□□□□ -1.07
CHD1L-209ENST00000492728 LCA10Q71F78 164 aa8.34□□□□□ -1.07
CHD1L-209ENST00000492728 FAM236AA0A1B0GUQ0 79 aa8.33□□□□□ -1.08
CHD1L-209ENST00000492728 FAM236BA0A1B0GV22 79 aa8.33□□□□□ -1.08
CHD1L-209ENST00000492728 ATP5EP2Q5VTU8 51 aa8.33□□□□□ -1.08
CHD1L-209ENST00000492728 C1orf64Q8NEQ6 169 aa8.33□□□□□ -1.08
CHD1L-209ENST00000492728 IMUPQ9GZP8 106 aa8.3□□□□□ -1.08
CHD1L-209ENST00000492728 KRTAP19-8Q3LI54 63 aa8.29□□□□□ -1.08
CHD1L-209ENST00000492728 SPRR2GQ9BYE4 73 aa8.29□□□□□ -1.08
CHD1L-209ENST00000492728 CSAG1Q6PB30 78 aa8.27□□□□□ -1.09
CHD1L-209ENST00000492728 SCGB1A1P11684 91 aa8.26□□□□□ -1.09
CHD1L-209ENST00000492728 A6NN06 94 aa8.25□□□□□ -1.09
CHD1L-209ENST00000492728 Q5VV11 94 aa8.25□□□□□ -1.09
CHD1L-209ENST00000492728 NEBP20929 6669 aa8.24□□□□□ -1.09
CHD1L-209ENST00000492728 MUC12Q9UKN1 5478 aa8.21□□□□□ -1.09
CHD1L-209ENST00000492728 TP53AIP1Q9HCN2 124 aa8.21□□□□□ -1.1
CHD1L-209ENST00000492728 A0A087WVE0 104 aa8.19□□□□□ -1.1
CHD1L-209ENST00000492728 KLKP1Q107X0 134 aa8.18□□□□□ -1.1
CHD1L-209ENST00000492728 KRTAP10-5P60370 271 aa8.17□□□□□ -1.1
CHD1L-209ENST00000492728 CYP4F30PQ9H0H9 118 aa8.16□□□□□ -1.1
CHD1L-209ENST00000492728 HIST1H4AP62805 103 aaKnown RBP8.13□□□□□ -1.11
CHD1L-209ENST00000492728 LCE4AQ5TA78 99 aa8.13□□□□□ -1.11
CHD1L-209ENST00000492728 KRTAP4-11Q9BYQ6 195 aa8.13□□□□□ -1.11
CHD1L-209ENST00000492728 TRAV22A0A0B4J277 110 aa8.07□□□□□ -1.12
CHD1L-209ENST00000492728 LOC101927531A0A1B0GV80 90 aa8.04□□□□□ -1.12
CHD1L-209ENST00000492728 ATOX1O00244 68 aa8.03□□□□□ -1.12
CHD1L-209ENST00000492728 PCP4P48539 62 aa8.01□□□□□ -1.13
CHD1L-209ENST00000492728 KMT2DO14686 5537 aa8□□□□□ -1.13
CHD1L-209ENST00000492728 KRTAP5-9P26371 169 aa7.99□□□□□ -1.13
CHD1L-209ENST00000492728 CRIPTQ9P021 101 aa7.99□□□□□ -1.13
CHD1L-209ENST00000492728 ANAPC13Q9BS18 74 aa7.98□□□□□ -1.13
CHD1L-209ENST00000492728 MDN1Q9NU22 5596 aa7.96□□□□□ -1.13
CHD1L-209ENST00000492728 SMIM20Q8N5G0 67 aa7.96□□□□□ -1.14
CHD1L-209ENST00000492728 H0Y9P7 68 aa7.93□□□□□ -1.14
CHD1L-209ENST00000492728 UQCRQO14949 82 aa7.92□□□□□ -1.14
CHD1L-209ENST00000492728 SERP2Q8N6R1 65 aa7.92□□□□□ -1.14
CHD1L-209ENST00000492728 H0YAA0 97 aa7.91□□□□□ -1.14
CHD1L-209ENST00000492728 TRAV7A0A075B6U4 112 aa7.9□□□□□ -1.14
CHD1L-209ENST00000492728 OCR1Q9BZK8 76 aa7.9□□□□□ -1.14
CHD1L-209ENST00000492728 NDUFC1O43677 76 aa7.89□□□□□ -1.15
CHD1L-209ENST00000492728 COX7CP15954 63 aa7.89□□□□□ -1.15
CHD1L-209ENST00000492728 KRTAP20-1Q3LI63 56 aa7.87□□□□□ -1.15
CHD1L-209ENST00000492728 ADM2Q7Z4H4 148 aa7.85□□□□□ -1.15
CHD1L-209ENST00000492728 CCDC179H3BU77 68 aa7.81□□□□□ -1.16
CHD1L-209ENST00000492728 A8MUN3 132 aa7.8□□□□□ -1.16
CHD1L-209ENST00000492728 MT1XP80297 61 aa7.79□□□□□ -1.16
CHD1L-209ENST00000492728 LCE5AQ5TCM9 118 aa7.79□□□□□ -1.16
CHD1L-209ENST00000492728 LINC00208Q96KT6 92 aa7.78□□□□□ -1.16
CHD1L-209ENST00000492728 C20orf197Q8N268 126 aa7.72□□□□□ -1.17
CHD1L-209ENST00000492728 H3BPC8 53 aa7.7□□□□□ -1.18
CHD1L-209ENST00000492728 P0C880 135 aa7.7□□□□□ -1.18
CHD1L-209ENST00000492728 MP68P56378 58 aa7.69□□□□□ -1.18
CHD1L-209ENST00000492728 SPRR2FQ96RM1 72 aa7.69□□□□□ -1.18
CHD1L-209ENST00000492728 KRTAP5-3Q6L8H2 238 aa7.68□□□□□ -1.18
CHD1L-209ENST00000492728 PRO2289Q9P1D8 64 aa7.67□□□□□ -1.18
CHD1L-209ENST00000492728 CYSTM1Q9H1C7 97 aa7.65□□□□□ -1.18
CHD1L-209ENST00000492728 SNURFQ9Y675 71 aa7.64□□□□□ -1.19
CHD1L-209ENST00000492728 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
CHD1L-209ENST00000492728 SPRR2EP22531 72 aa7.62□□□□□ -1.19
CHD1L-209ENST00000492728 SPRR2BP35325 72 aa7.62□□□□□ -1.19
CHD1L-209ENST00000492728 SPRR2AP35326 72 aa7.62□□□□□ -1.19
CHD1L-209ENST00000492728 R4GN34 69 aa7.62□□□□□ -1.19
CHD1L-209ENST00000492728 H7BZZ5 65 aa7.61□□□□□ -1.19
CHD1L-209ENST00000492728 KRTAP2-3P0C7H8 128 aa7.59□□□□□ -1.19
CHD1L-209ENST00000492728 DMAC1Q96GE9 116 aa7.59□□□□□ -1.19
CHD1L-209ENST00000492728 KRTAP2-4Q9BYR9 128 aa7.59□□□□□ -1.19
CHD1L-209ENST00000492728 M0QZ58 72 aa7.58□□□□□ -1.2
CHD1L-209ENST00000492728 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
CHD1L-209ENST00000492728 TMEM258P61165 79 aa7.58□□□□□ -1.2
CHD1L-209ENST00000492728 KRTAP19-4Q3LI73 84 aa7.58□□□□□ -1.2
CHD1L-209ENST00000492728 KRTAP8-1Q8IUC2 63 aa7.58□□□□□ -1.2
CHD1L-209ENST00000492728 LCE1AQ5T7P2 110 aa7.53□□□□□ -1.2
CHD1L-209ENST00000492728 ATP5EP56381 51 aaPredicted RBP7.5□□□□□ -1.21
CHD1L-209ENST00000492728 LINC01554Q52M75 96 aa7.49□□□□□ -1.21
CHD1L-209ENST00000492728 SPANXA2-OT1Q8N9U9 137 aa7.47□□□□□ -1.21
CHD1L-209ENST00000492728 KRTAP10-7P60409 375 aaPredicted RBP7.45□□□□□ -1.22
CHD1L-209ENST00000492728 KRTAP10-12P60413 245 aa7.37□□□□□ -1.23
CHD1L-209ENST00000492728 SPRR2DP22532 72 aa7.36□□□□□ -1.23
CHD1L-209ENST00000492728 KRTAP2-2Q9BYT5 123 aa7.35□□□□□ -1.23
CHD1L-209ENST00000492728 KRTAP2-1Q9BYU5 128 aa7.35□□□□□ -1.23
CHD1L-209ENST00000492728 RPS28P62857 69 aaKnown RBP7.33□□□□□ -1.24
CHD1L-209ENST00000492728 SERP1Q9Y6X1 66 aa7.33□□□□□ -1.24
CHD1L-209ENST00000492728 ACYP2P14621 99 aa7.29□□□□□ -1.24
CHD1L-209ENST00000492728 COA5Q86WW8 74 aa7.2□□□□□ -1.26
CHD1L-209ENST00000492728 SPTSSBQ8NFR3 76 aa7.19□□□□□ -1.26
CHD1L-209ENST00000492728 KRTAP13-4Q3LI77 160 aa7.16□□□□□ -1.26
CHD1L-209ENST00000492728 CHKB-CPT1BH3BT56 60 aa7.15□□□□□ -1.26
CHD1L-209ENST00000492728 SMIM26A0A096LP01 95 aa7.13□□□□□ -1.27
CHD1L-209ENST00000492728 Q1T7F1 81 aa7.01□□□□□ -1.29
CHD1L-209ENST00000492728 V9GYY9 64 aa7□□□□□ -1.29
CHD1L-209ENST00000492728 KRTAP19-7Q3SYF9 63 aa6.98□□□□□ -1.29
CHD1L-209ENST00000492728 CAMK2N1Q7Z7J9 78 aa6.96□□□□□ -1.3
CHD1L-209ENST00000492728 LINC01558Q9Y6Z2 57 aa6.94□□□□□ -1.3
CHD1L-209ENST00000492728 MT1EP04732 61 aa6.91□□□□□ -1.3
CHD1L-209ENST00000492728 DSTQ03001 7570 aaKnown RBP6.89□□□□□ -1.31
CHD1L-209ENST00000492728 KRTAP19-3Q7Z4W3 81 aa6.86□□□□□ -1.31
CHD1L-209ENST00000492728 A0A0D9SG42 100 aa6.84□□□□□ -1.31
CHD1L-209ENST00000492728 H3BS24 57 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms