RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 KIAA1109Q2LD37 5005 aa2.52□□□□□ -2.01
TRA2B-215ENST00000492417 LCE2AQ5TA79 106 aaPredicted RBP2.52□□□□□ -2.01
TRA2B-215ENST00000492417 VPS13DQ5THJ4 4388 aa2.52□□□□□ -2.01
TRA2B-215ENST00000492417 FAT1Q14517 4588 aa2.51□□□□□ -2.01
TRA2B-215ENST00000492417 ALMS1Q8TCU4 4167 aa2.51□□□□□ -2.01
TRA2B-215ENST00000492417 KRTAP25-1Q3LHN0 102 aa2.51□□□□□ -2.01
TRA2B-215ENST00000492417 DYNC1H1Q14204 4646 aaKnown RBP2.5□□□□□ -2.01
TRA2B-215ENST00000492417 KRTAP10-8P60410 259 aa2.5□□□□□ -2.01
TRA2B-215ENST00000492417 NDUFAF8A1L188 74 aa2.49□□□□□ -2.01
TRA2B-215ENST00000492417 H1FX-AS1Q4G0G2 97 aa2.49□□□□□ -2.01
TRA2B-215ENST00000492417 LRP1BQ9NZR2 4599 aa2.49□□□□□ -2.01
TRA2B-215ENST00000492417 RYR1P21817 5038 aa2.48□□□□□ -2.01
TRA2B-215ENST00000492417 PKHD1P08F94 4074 aa2.47□□□□□ -2.01
TRA2B-215ENST00000492417 LOC100996750A0A140TA64 210 aa2.47□□□□□ -2.01
TRA2B-215ENST00000492417 LORP23490 312 aaPredicted RBP2.47□□□□□ -2.01
TRA2B-215ENST00000492417 KRTAP4-6Q9BYQ5 205 aa2.47□□□□□ -2.01
TRA2B-215ENST00000492417 RPS29P62273 56 aaKnown RBP2.47□□□□□ -2.01
TRA2B-215ENST00000492417 KRTAP10-4P60372 401 aaPredicted RBP2.46□□□□□ -2.02
TRA2B-215ENST00000492417 C20orf166-AS1Q96NR2 134 aa2.45□□□□□ -2.02
TRA2B-215ENST00000492417 MT1HL1P0DM35 61 aa2.45□□□□□ -2.02
TRA2B-215ENST00000492417 DNAH17Q9UFH2 4485 aa2.44□□□□□ -2.02
TRA2B-215ENST00000492417 XP32Q5T750 250 aa2.44□□□□□ -2.02
TRA2B-215ENST00000492417 ABCA13Q86UQ4 5058 aa2.44□□□□□ -2.02
TRA2B-215ENST00000492417 DNAH6Q9C0G6 4158 aa2.44□□□□□ -2.02
TRA2B-215ENST00000492417 R4GN34 69 aa2.43□□□□□ -2.02
TRA2B-215ENST00000492417 S4R3F8 94 aa2.43□□□□□ -2.02
TRA2B-215ENST00000492417 DNAH2Q9P225 4427 aa2.43□□□□□ -2.02
TRA2B-215ENST00000492417 FAT2Q9NYQ8 4349 aa2.42□□□□□ -2.02
TRA2B-215ENST00000492417 A8MUU9 505 aa2.42□□□□□ -2.02
TRA2B-215ENST00000492417 TPRXLQ17RH7 258 aa2.41□□□□□ -2.02
TRA2B-215ENST00000492417 KRTAP13-3Q3SY46 172 aa2.41□□□□□ -2.02
TRA2B-215ENST00000492417 APOBP04114 4563 aaKnown RBP2.4□□□□□ -2.03
TRA2B-215ENST00000492417 M0QZ58 72 aa2.39□□□□□ -2.03
TRA2B-215ENST00000492417 FAT3Q8TDW7 4589 aa2.37□□□□□ -2.03
TRA2B-215ENST00000492417 VPS13BQ7Z7G8 4022 aa2.37□□□□□ -2.03
TRA2B-215ENST00000492417 PLAC4Q8WY50 150 aa2.37□□□□□ -2.03
TRA2B-215ENST00000492417 DNAH8Q96JB1 4490 aa2.37□□□□□ -2.03
TRA2B-215ENST00000492417 PKD1P98161 4303 aa2.37□□□□□ -2.03
TRA2B-215ENST00000492417 LRP1Q07954 4544 aaKnown RBP2.37□□□□□ -2.03
TRA2B-215ENST00000492417 MYCBP2O75592 4640 aa2.34□□□□□ -2.04
TRA2B-215ENST00000492417 C10orf95Q9H7T3 257 aa2.33□□□□□ -2.04
TRA2B-215ENST00000492417 HERC1Q15751 4861 aa2.32□□□□□ -2.04
TRA2B-215ENST00000492417 HSPG2P98160 4391 aa2.32□□□□□ -2.04
TRA2B-215ENST00000492417 UBR4Q5T4S7 5183 aa2.32□□□□□ -2.04
TRA2B-215ENST00000492417 H0YAA0 97 aa2.3□□□□□ -2.04
TRA2B-215ENST00000492417 P0C880 135 aa2.29□□□□□ -2.04
TRA2B-215ENST00000492417 PKHD1L1Q86WI1 4243 aa2.29□□□□□ -2.04
TRA2B-215ENST00000492417 KRTAP10-10P60014 251 aa2.25□□□□□ -2.05
TRA2B-215ENST00000492417 KRTAP3-1Q9BYR8 98 aa2.25□□□□□ -2.05
TRA2B-215ENST00000492417 LRP2P98164 4655 aa2.25□□□□□ -2.05
TRA2B-215ENST00000492417 TNP1P09430 55 aa2.24□□□□□ -2.05
TRA2B-215ENST00000492417 PP632Q6XCG6 107 aa2.23□□□□□ -2.05
TRA2B-215ENST00000492417 KRTAP4-1Q9BYQ7 146 aa2.21□□□□□ -2.06
TRA2B-215ENST00000492417 HMCN2Q8NDA2 5059 aa2.2□□□□□ -2.06
TRA2B-215ENST00000492417 PRO2289Q9P1D8 64 aa2.18□□□□□ -2.06
TRA2B-215ENST00000492417 LPAP08519 4548 aa2.18□□□□□ -2.06
TRA2B-215ENST00000492417 KRTAP19-4Q3LI73 84 aa2.17□□□□□ -2.06
TRA2B-215ENST00000492417 KRTAP15-1Q3LI76 137 aa2.17□□□□□ -2.06
TRA2B-215ENST00000492417 TNXBP22105 4242 aa2.15□□□□□ -2.07
TRA2B-215ENST00000492417 FAT4Q6V0I7 4981 aa2.15□□□□□ -2.07
TRA2B-215ENST00000492417 MUC2Q02817 5179 aa2.14□□□□□ -2.07
TRA2B-215ENST00000492417 INE1O15225 51 aa2.14□□□□□ -2.07
TRA2B-215ENST00000492417 RNF213Q63HN8 5207 aa2.12□□□□□ -2.07
TRA2B-215ENST00000492417 KRTAP12-2P59991 146 aa2.11□□□□□ -2.07
TRA2B-215ENST00000492417 MT1HP80294 61 aa2.1□□□□□ -2.07
TRA2B-215ENST00000492417 KRTAP12-1P59990 96 aa2.09□□□□□ -2.08
TRA2B-215ENST00000492417 KRTAP13-4Q3LI77 160 aa2.05□□□□□ -2.08
TRA2B-215ENST00000492417 FSIP2Q5CZC0 6907 aa2.05□□□□□ -2.08
TRA2B-215ENST00000492417 KRTAP10-6P60371 365 aaPredicted RBP2.05□□□□□ -2.08
TRA2B-215ENST00000492417 MT2AP02795 61 aa2.02□□□□□ -2.09
TRA2B-215ENST00000492417 MT1FP04733 61 aa2□□□□□ -2.09
TRA2B-215ENST00000492417 KRTAP4-8Q9BYQ9 185 aa2□□□□□ -2.09
TRA2B-215ENST00000492417 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
TRA2B-215ENST00000492417 KRTAP19-2Q3LHN2 52 aa1.96□□□□□ -2.1
TRA2B-215ENST00000492417 KRTAP9-8Q9BYQ0 159 aa1.93□□□□□ -2.1
TRA2B-215ENST00000492417 KRTAP4-7Q9BYR0 210 aa1.9□□□□□ -2.11
TRA2B-215ENST00000492417 MUC17Q685J3 4493 aa1.9□□□□□ -2.11
TRA2B-215ENST00000492417 KRTAP9-6A0A140TA67 174 aa1.89□□□□□ -2.11
TRA2B-215ENST00000492417 KRTAP9-2Q9BYQ4 174 aa1.89□□□□□ -2.11
TRA2B-215ENST00000492417 FLGP20930 4061 aaPredicted RBP1.89□□□□□ -2.11
TRA2B-215ENST00000492417 KRTAP19-1Q8IUB9 90 aa1.88□□□□□ -2.11
TRA2B-215ENST00000492417 KRTAP4-8A0A0G2JLE6 195 aa1.88□□□□□ -2.11
TRA2B-215ENST00000492417 SPRR2GQ9BYE4 73 aa1.88□□□□□ -2.11
TRA2B-215ENST00000492417 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.87□□□□□ -2.11
TRA2B-215ENST00000492417 KRTAP9-3Q9BYQ3 159 aa1.87□□□□□ -2.11
TRA2B-215ENST00000492417 LCE4AQ5TA78 99 aa1.86□□□□□ -2.11
TRA2B-215ENST00000492417 KRTAP4-2Q9BYR5 136 aa1.86□□□□□ -2.11
TRA2B-215ENST00000492417 CRCT1Q9UGL9 99 aa1.85□□□□□ -2.11
TRA2B-215ENST00000492417 KRTAP10-12P60413 245 aa1.84□□□□□ -2.12
TRA2B-215ENST00000492417 MT1BP07438 61 aa1.83□□□□□ -2.12
TRA2B-215ENST00000492417 KRTAP8-1Q8IUC2 63 aa1.83□□□□□ -2.12
TRA2B-215ENST00000492417 SSPOA2VEC9 5147 aa1.82□□□□□ -2.12
TRA2B-215ENST00000492417 KRTAP9-7A8MTY7 169 aa1.82□□□□□ -2.12
TRA2B-215ENST00000492417 KRTAP4-12Q9BQ66 201 aa1.82□□□□□ -2.12
TRA2B-215ENST00000492417 KRTAP9-4Q9BYQ2 154 aa1.81□□□□□ -2.12
TRA2B-215ENST00000492417 KRTAP19-8Q3LI54 63 aa1.81□□□□□ -2.12
TRA2B-215ENST00000492417 USH2AO75445 5202 aa1.8□□□□□ -2.12
TRA2B-215ENST00000492417 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
TRA2B-215ENST00000492417 KRTAP9-9Q9BYP9 154 aa1.79□□□□□ -2.12
TRA2B-215ENST00000492417 SPRR2FQ96RM1 72 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 1308.9 ms