RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 A0A087WVE0 104 aa3.82□□□□□ -1.8
SMARCB1-207ENST00000491967 MT-ATP8P03928 68 aa3.82□□□□□ -1.8
SMARCB1-207ENST00000491967 LCE1DQ5T752 114 aa3.82□□□□□ -1.8
SMARCB1-207ENST00000491967 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
SMARCB1-207ENST00000491967 MT1BP07438 61 aa3.8□□□□□ -1.8
SMARCB1-207ENST00000491967 KRTAP19-8Q3LI54 63 aa3.8□□□□□ -1.8
SMARCB1-207ENST00000491967 SPRR2GQ9BYE4 73 aa3.8□□□□□ -1.8
SMARCB1-207ENST00000491967 C5orf47Q569G3 176 aa3.77□□□□□ -1.81
SMARCB1-207ENST00000491967 CSAG1Q6PB30 78 aa3.76□□□□□ -1.81
SMARCB1-207ENST00000491967 LCA10Q71F78 164 aa3.76□□□□□ -1.81
SMARCB1-207ENST00000491967 C1orf64Q8NEQ6 169 aa3.76□□□□□ -1.81
SMARCB1-207ENST00000491967 SCGB1A1P11684 91 aa3.75□□□□□ -1.81
SMARCB1-207ENST00000491967 IMUPQ9GZP8 106 aa3.75□□□□□ -1.81
SMARCB1-207ENST00000491967 TP53AIP1Q9HCN2 124 aa3.75□□□□□ -1.81
SMARCB1-207ENST00000491967 S4R3F8 94 aa3.75□□□□□ -1.81
SMARCB1-207ENST00000491967 A6NN06 94 aa3.73□□□□□ -1.81
SMARCB1-207ENST00000491967 KRTAP10-5P60370 271 aa3.73□□□□□ -1.81
SMARCB1-207ENST00000491967 Q5VV11 94 aa3.73□□□□□ -1.81
SMARCB1-207ENST00000491967 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
SMARCB1-207ENST00000491967 UQCRQO14949 82 aa3.72□□□□□ -1.81
SMARCB1-207ENST00000491967 FAM236AA0A1B0GUQ0 79 aa3.71□□□□□ -1.82
SMARCB1-207ENST00000491967 FAM236BA0A1B0GV22 79 aa3.71□□□□□ -1.82
SMARCB1-207ENST00000491967 KLKP1Q107X0 134 aa3.71□□□□□ -1.82
SMARCB1-207ENST00000491967 CYP4F30PQ9H0H9 118 aa3.71□□□□□ -1.82
SMARCB1-207ENST00000491967 TRAV22A0A0B4J277 110 aa3.69□□□□□ -1.82
SMARCB1-207ENST00000491967 H0Y9P7 68 aa3.69□□□□□ -1.82
SMARCB1-207ENST00000491967 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
SMARCB1-207ENST00000491967 OCR1Q9BZK8 76 aa3.69□□□□□ -1.82
SMARCB1-207ENST00000491967 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
SMARCB1-207ENST00000491967 CRIPTQ9P021 101 aa3.68□□□□□ -1.82
SMARCB1-207ENST00000491967 KRTAP2-3P0C7H8 128 aa3.66□□□□□ -1.82
SMARCB1-207ENST00000491967 MP68P56378 58 aa3.66□□□□□ -1.82
SMARCB1-207ENST00000491967 LINC00208Q96KT6 92 aa3.66□□□□□ -1.82
SMARCB1-207ENST00000491967 KRTAP2-4Q9BYR9 128 aa3.66□□□□□ -1.82
SMARCB1-207ENST00000491967 LOC101927531A0A1B0GV80 90 aa3.65□□□□□ -1.83
SMARCB1-207ENST00000491967 ATOX1O00244 68 aa3.65□□□□□ -1.83
SMARCB1-207ENST00000491967 TRAV7A0A075B6U4 112 aa3.64□□□□□ -1.83
SMARCB1-207ENST00000491967 H0YAA0 97 aa3.64□□□□□ -1.83
SMARCB1-207ENST00000491967 SMIM20Q8N5G0 67 aa3.64□□□□□ -1.83
SMARCB1-207ENST00000491967 KMT2DO14686 5537 aa3.63□□□□□ -1.83
SMARCB1-207ENST00000491967 H3BPC8 53 aa3.61□□□□□ -1.83
SMARCB1-207ENST00000491967 SERP2Q8N6R1 65 aa3.61□□□□□ -1.83
SMARCB1-207ENST00000491967 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
SMARCB1-207ENST00000491967 SNURFQ9Y675 71 aa3.58□□□□□ -1.84
SMARCB1-207ENST00000491967 NDUFC1O43677 76 aa3.57□□□□□ -1.84
SMARCB1-207ENST00000491967 C20orf197Q8N268 126 aa3.57□□□□□ -1.84
SMARCB1-207ENST00000491967 ANAPC13Q9BS18 74 aa3.57□□□□□ -1.84
SMARCB1-207ENST00000491967 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
SMARCB1-207ENST00000491967 A8MUN3 132 aa3.56□□□□□ -1.84
SMARCB1-207ENST00000491967 COX7CP15954 63 aa3.55□□□□□ -1.84
SMARCB1-207ENST00000491967 MT1XP80297 61 aa3.54□□□□□ -1.84
SMARCB1-207ENST00000491967 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
SMARCB1-207ENST00000491967 ADM2Q7Z4H4 148 aa3.52□□□□□ -1.85
SMARCB1-207ENST00000491967 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
SMARCB1-207ENST00000491967 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
SMARCB1-207ENST00000491967 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
SMARCB1-207ENST00000491967 PRO2289Q9P1D8 64 aa3.5□□□□□ -1.85
SMARCB1-207ENST00000491967 CCDC179H3BU77 68 aa3.49□□□□□ -1.85
SMARCB1-207ENST00000491967 KRTAP12-2P59991 146 aa3.49□□□□□ -1.85
SMARCB1-207ENST00000491967 DMAC1Q96GE9 116 aa3.48□□□□□ -1.85
SMARCB1-207ENST00000491967 CYSTM1Q9H1C7 97 aa3.48□□□□□ -1.85
SMARCB1-207ENST00000491967 SPRR2FQ96RM1 72 aa3.47□□□□□ -1.85
SMARCB1-207ENST00000491967 P0C880 135 aa3.46□□□□□ -1.86
SMARCB1-207ENST00000491967 ACYP2P14621 99 aa3.46□□□□□ -1.86
SMARCB1-207ENST00000491967 PLAC4Q8WY50 150 aa3.46□□□□□ -1.86
SMARCB1-207ENST00000491967 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
SMARCB1-207ENST00000491967 SPANXA2-OT1Q8N9U9 137 aa3.45□□□□□ -1.86
SMARCB1-207ENST00000491967 H7BZZ5 65 aa3.44□□□□□ -1.86
SMARCB1-207ENST00000491967 SPRR2EP22531 72 aa3.44□□□□□ -1.86
SMARCB1-207ENST00000491967 SPRR2BP35325 72 aa3.44□□□□□ -1.86
SMARCB1-207ENST00000491967 SPRR2AP35326 72 aa3.44□□□□□ -1.86
SMARCB1-207ENST00000491967 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
SMARCB1-207ENST00000491967 KRTAP8-1Q8IUC2 63 aa3.43□□□□□ -1.86
SMARCB1-207ENST00000491967 R4GN34 69 aa3.43□□□□□ -1.86
SMARCB1-207ENST00000491967 CHKB-CPT1BH3BT56 60 aa3.41□□□□□ -1.86
SMARCB1-207ENST00000491967 M0QZ58 72 aa3.4□□□□□ -1.87
SMARCB1-207ENST00000491967 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.87
SMARCB1-207ENST00000491967 COA5Q86WW8 74 aa3.38□□□□□ -1.87
SMARCB1-207ENST00000491967 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
SMARCB1-207ENST00000491967 PCP4P48539 62 aa3.36□□□□□ -1.87
SMARCB1-207ENST00000491967 SPTSSBQ8NFR3 76 aa3.36□□□□□ -1.87
SMARCB1-207ENST00000491967 KRTAP10-7P60409 375 aaPredicted RBP3.35□□□□□ -1.87
SMARCB1-207ENST00000491967 TMEM258P61165 79 aa3.34□□□□□ -1.87
SMARCB1-207ENST00000491967 ATP5EP56381 51 aaPredicted RBP3.33□□□□□ -1.88
SMARCB1-207ENST00000491967 SPRR2DP22532 72 aa3.32□□□□□ -1.88
SMARCB1-207ENST00000491967 LINC01554Q52M75 96 aa3.31□□□□□ -1.88
SMARCB1-207ENST00000491967 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
SMARCB1-207ENST00000491967 SEC61GP60059 68 aa3.24□□□□□ -1.89
SMARCB1-207ENST00000491967 SERP1Q9Y6X1 66 aa3.24□□□□□ -1.89
SMARCB1-207ENST00000491967 DSTQ03001 7570 aaKnown RBP3.24□□□□□ -1.89
SMARCB1-207ENST00000491967 A0A1B0GU69 56 aa3.2□□□□□ -1.9
SMARCB1-207ENST00000491967 KRTAP13-4Q3LI77 160 aa3.2□□□□□ -1.9
SMARCB1-207ENST00000491967 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
SMARCB1-207ENST00000491967 LINC01558Q9Y6Z2 57 aa3.18□□□□□ -1.9
SMARCB1-207ENST00000491967 A0A1B0GU33 70 aa3.16□□□□□ -1.9
SMARCB1-207ENST00000491967 PRR15LQ9BU68 103 aa3.16□□□□□ -1.9
SMARCB1-207ENST00000491967 SPATA8Q6RVD6 105 aa3.14□□□□□ -1.91
SMARCB1-207ENST00000491967 SMIM26A0A096LP01 95 aa3.13□□□□□ -1.91
SMARCB1-207ENST00000491967 MT1EP04732 61 aa3.13□□□□□ -1.91
SMARCB1-207ENST00000491967 RPS28P62857 69 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms