RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 RPS29P62273 56 aaKnown RBP5.64□□□□□ -1.51
HDAC9-225ENST00000490851 FAT3Q8TDW7 4589 aa5.63□□□□□ -1.51
HDAC9-225ENST00000490851 Q5W150 140 aa5.62□□□□□ -1.51
HDAC9-225ENST00000490851 HRES1P13985 223 aa5.62□□□□□ -1.51
HDAC9-225ENST00000490851 KRTAP10-8P60410 259 aa5.62□□□□□ -1.51
HDAC9-225ENST00000490851 C9orf92A6NGG3 77 aa5.61□□□□□ -1.51
HDAC9-225ENST00000490851 TP53AIP1Q9HCN2 124 aa5.61□□□□□ -1.51
HDAC9-225ENST00000490851 KRTAP4-5Q9BYR2 181 aa5.6□□□□□ -1.51
HDAC9-225ENST00000490851 KRTAP15-1Q3LI76 137 aa5.58□□□□□ -1.52
HDAC9-225ENST00000490851 A0A1B0GU69 56 aa5.56□□□□□ -1.52
HDAC9-225ENST00000490851 MT1HL1P0DM35 61 aa5.55□□□□□ -1.52
HDAC9-225ENST00000490851 CAMK2N1Q7Z7J9 78 aa5.55□□□□□ -1.52
HDAC9-225ENST00000490851 PCOTHQ58A44 107 aa5.55□□□□□ -1.52
HDAC9-225ENST00000490851 ABCA13Q86UQ4 5058 aa5.53□□□□□ -1.52
HDAC9-225ENST00000490851 KRTAP13-3Q3SY46 172 aa5.52□□□□□ -1.53
HDAC9-225ENST00000490851 SPINT4Q6UDR6 99 aa5.5□□□□□ -1.53
HDAC9-225ENST00000490851 BIRC6Q9NR09 4857 aa5.5□□□□□ -1.53
HDAC9-225ENST00000490851 IGKV2D-30A0A075B6S6 120 aa5.48□□□□□ -1.53
HDAC9-225ENST00000490851 IGKV2-30P06310 120 aa5.48□□□□□ -1.53
HDAC9-225ENST00000490851 HERC2O95714 4834 aa5.46□□□□□ -1.54
HDAC9-225ENST00000490851 ACYP2P14621 99 aa5.42□□□□□ -1.54
HDAC9-225ENST00000490851 XP32Q5T750 250 aa5.38□□□□□ -1.55
HDAC9-225ENST00000490851 LPAP08519 4548 aa5.35□□□□□ -1.55
HDAC9-225ENST00000490851 RPL37P61927 97 aaKnown RBP5.34□□□□□ -1.56
HDAC9-225ENST00000490851 PCLOQ9Y6V0 5065 aa5.32□□□□□ -1.56
HDAC9-225ENST00000490851 LRP2P98164 4655 aa5.32□□□□□ -1.56
HDAC9-225ENST00000490851 TPRXLQ17RH7 258 aa5.3□□□□□ -1.56
HDAC9-225ENST00000490851 A0A1B0GU33 70 aa5.28□□□□□ -1.56
HDAC9-225ENST00000490851 HERC1Q15751 4861 aa5.25□□□□□ -1.57
HDAC9-225ENST00000490851 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
HDAC9-225ENST00000490851 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
HDAC9-225ENST00000490851 COX6B2Q6YFQ2 88 aa5.17□□□□□ -1.58
HDAC9-225ENST00000490851 CRIPTQ9P021 101 aa5.17□□□□□ -1.58
HDAC9-225ENST00000490851 H0YAA0 97 aa5.16□□□□□ -1.58
HDAC9-225ENST00000490851 HMCN2Q8NDA2 5059 aa5.12□□□□□ -1.59
HDAC9-225ENST00000490851 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
HDAC9-225ENST00000490851 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
HDAC9-225ENST00000490851 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.59
HDAC9-225ENST00000490851 KRTAP4-1Q9BYQ7 146 aa5.08□□□□□ -1.6
HDAC9-225ENST00000490851 MUC2Q02817 5179 aa5.07□□□□□ -1.6
HDAC9-225ENST00000490851 MUC17Q685J3 4493 aa5.04□□□□□ -1.6
HDAC9-225ENST00000490851 S4R3F8 94 aa5.04□□□□□ -1.6
HDAC9-225ENST00000490851 H1FX-AS1Q4G0G2 97 aa5.03□□□□□ -1.6
HDAC9-225ENST00000490851 KRTAP3-3Q9BYR6 98 aa5□□□□□ -1.61
HDAC9-225ENST00000490851 UBR4Q5T4S7 5183 aa4.97□□□□□ -1.61
HDAC9-225ENST00000490851 R4GN34 69 aa4.93□□□□□ -1.62
HDAC9-225ENST00000490851 RNF213Q63HN8 5207 aa4.92□□□□□ -1.62
HDAC9-225ENST00000490851 PLAC4Q8WY50 150 aa4.92□□□□□ -1.62
HDAC9-225ENST00000490851 C10orf95Q9H7T3 257 aa4.89□□□□□ -1.63
HDAC9-225ENST00000490851 KRTAP19-2Q3LHN2 52 aa4.88□□□□□ -1.63
HDAC9-225ENST00000490851 KRTAP3-2Q9BYR7 98 aa4.84□□□□□ -1.63
HDAC9-225ENST00000490851 FAT4Q6V0I7 4981 aa4.84□□□□□ -1.64
HDAC9-225ENST00000490851 KRTAP10-6P60371 365 aaPredicted RBP4.84□□□□□ -1.64
HDAC9-225ENST00000490851 FLGP20930 4061 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-225ENST00000490851 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-225ENST00000490851 INE1O15225 51 aa4.78□□□□□ -1.64
HDAC9-225ENST00000490851 KRTAP13-4Q3LI77 160 aa4.76□□□□□ -1.65
HDAC9-225ENST00000490851 LCE2CQ5TA81 110 aa4.76□□□□□ -1.65
HDAC9-225ENST00000490851 A0A0D9SG42 100 aa4.74□□□□□ -1.65
HDAC9-225ENST00000490851 M0R2T5 61 aa4.72□□□□□ -1.65
HDAC9-225ENST00000490851 LORP23490 312 aaPredicted RBP4.69□□□□□ -1.66
HDAC9-225ENST00000490851 MT1HP80294 61 aa4.68□□□□□ -1.66
HDAC9-225ENST00000490851 M0QZ58 72 aa4.67□□□□□ -1.66
HDAC9-225ENST00000490851 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
HDAC9-225ENST00000490851 KRTAP12-1P59990 96 aa4.55□□□□□ -1.68
HDAC9-225ENST00000490851 KRTAP10-10P60014 251 aa4.52□□□□□ -1.69
HDAC9-225ENST00000490851 MT2AP02795 61 aa4.52□□□□□ -1.69
HDAC9-225ENST00000490851 MT1FP04733 61 aa4.51□□□□□ -1.69
HDAC9-225ENST00000490851 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
HDAC9-225ENST00000490851 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
HDAC9-225ENST00000490851 KRTAP19-1Q8IUB9 90 aa4.43□□□□□ -1.7
HDAC9-225ENST00000490851 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
HDAC9-225ENST00000490851 SPRR2GQ9BYE4 73 aa4.41□□□□□ -1.7
HDAC9-225ENST00000490851 LCE2AQ5TA79 106 aaPredicted RBP4.4□□□□□ -1.7
HDAC9-225ENST00000490851 KRTAP9-3Q9BYQ3 159 aa4.33□□□□□ -1.72
HDAC9-225ENST00000490851 KRTAP4-8Q9BYQ9 185 aa4.27□□□□□ -1.73
HDAC9-225ENST00000490851 KRTAP19-8Q3LI54 63 aa4.27□□□□□ -1.73
HDAC9-225ENST00000490851 MT1BP07438 61 aa4.25□□□□□ -1.73
HDAC9-225ENST00000490851 LCE2BO14633 110 aa4.23□□□□□ -1.73
HDAC9-225ENST00000490851 USH2AO75445 5202 aa4.23□□□□□ -1.73
HDAC9-225ENST00000490851 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
HDAC9-225ENST00000490851 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.17□□□□□ -1.74
HDAC9-225ENST00000490851 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.75
HDAC9-225ENST00000490851 TNP1P09430 55 aa4.15□□□□□ -1.75
HDAC9-225ENST00000490851 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.75
HDAC9-225ENST00000490851 MT1XP80297 61 aa4.14□□□□□ -1.75
HDAC9-225ENST00000490851 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
HDAC9-225ENST00000490851 KRTAP4-8A0A0G2JLE6 195 aa4.13□□□□□ -1.75
HDAC9-225ENST00000490851 FSIP2Q5CZC0 6907 aa4.09□□□□□ -1.76
HDAC9-225ENST00000490851 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
HDAC9-225ENST00000490851 SSPOA2VEC9 5147 aa4.03□□□□□ -1.76
HDAC9-225ENST00000490851 KRTAP10-7P60409 375 aaPredicted RBP4.02□□□□□ -1.77
HDAC9-225ENST00000490851 LCE3AQ5TA76 89 aa4□□□□□ -1.77
HDAC9-225ENST00000490851 LCE3BQ5TA77 95 aa3.99□□□□□ -1.77
HDAC9-225ENST00000490851 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
HDAC9-225ENST00000490851 KMT2DO14686 5537 aa3.95□□□□□ -1.78
HDAC9-225ENST00000490851 KRTAP9-9Q9BYP9 154 aa3.93□□□□□ -1.78
HDAC9-225ENST00000490851 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
HDAC9-225ENST00000490851 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
HDAC9-225ENST00000490851 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms