RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 PMAIP1Q13794 54 aa3.53□□□□□ -1.84
FN1-223ENST00000490833 DNAH2Q9P225 4427 aa3.53□□□□□ -1.84
FN1-223ENST00000490833 UQCR11O14957 56 aa3.52□□□□□ -1.85
FN1-223ENST00000490833 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
FN1-223ENST00000490833 SACSQ9NZJ4 4579 aa3.51□□□□□ -1.85
FN1-223ENST00000490833 DNAH8Q96JB1 4490 aa3.5□□□□□ -1.85
FN1-223ENST00000490833 PCLOQ9Y6V0 5065 aa3.49□□□□□ -1.85
FN1-223ENST00000490833 RYR1P21817 5038 aa3.49□□□□□ -1.85
FN1-223ENST00000490833 SMR3BP02814 79 aaPredicted RBP3.49□□□□□ -1.85
FN1-223ENST00000490833 HERC2O95714 4834 aa3.48□□□□□ -1.85
FN1-223ENST00000490833 KRTAP10-4P60372 401 aaPredicted RBP3.47□□□□□ -1.85
FN1-223ENST00000490833 SPATA8Q6RVD6 105 aa3.47□□□□□ -1.85
FN1-223ENST00000490833 RETNLBQ9BQ08 111 aa3.47□□□□□ -1.85
FN1-223ENST00000490833 FRAS1Q86XX4 4008 aa3.46□□□□□ -1.86
FN1-223ENST00000490833 SPINK7P58062 85 aa3.45□□□□□ -1.86
FN1-223ENST00000490833 KRTAP10-8P60410 259 aa3.45□□□□□ -1.86
FN1-223ENST00000490833 LCA10Q71F78 164 aa3.45□□□□□ -1.86
FN1-223ENST00000490833 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
FN1-223ENST00000490833 KTN1-AS1Q86SY8 53 aa3.44□□□□□ -1.86
FN1-223ENST00000490833 DNAH5Q8TE73 4624 aa3.44□□□□□ -1.86
FN1-223ENST00000490833 DNAH11Q96DT5 4516 aa3.44□□□□□ -1.86
FN1-223ENST00000490833 COX6B2Q6YFQ2 88 aa3.43□□□□□ -1.86
FN1-223ENST00000490833 PKD1P98161 4303 aa3.43□□□□□ -1.86
FN1-223ENST00000490833 K7ERS5 55 aa3.42□□□□□ -1.86
FN1-223ENST00000490833 Q5VSD8 79 aa3.42□□□□□ -1.86
FN1-223ENST00000490833 VPS13BQ7Z7G8 4022 aa3.42□□□□□ -1.86
FN1-223ENST00000490833 C9orf92A6NGG3 77 aa3.41□□□□□ -1.86
FN1-223ENST00000490833 A6NN06 94 aa3.4□□□□□ -1.87
FN1-223ENST00000490833 LRP1BQ9NZR2 4599 aa3.39□□□□□ -1.87
FN1-223ENST00000490833 FAT2Q9NYQ8 4349 aa3.39□□□□□ -1.87
FN1-223ENST00000490833 RPL37P61927 97 aaKnown RBP3.39□□□□□ -1.87
FN1-223ENST00000490833 A0A1B0GU33 70 aa3.38□□□□□ -1.87
FN1-223ENST00000490833 RBM12B-AS1Q9P1G2 102 aa3.38□□□□□ -1.87
FN1-223ENST00000490833 TPRXLQ17RH7 258 aa3.35□□□□□ -1.87
FN1-223ENST00000490833 KIAA1109Q2LD37 5005 aa3.35□□□□□ -1.87
FN1-223ENST00000490833 ABCA13Q86UQ4 5058 aa3.33□□□□□ -1.88
FN1-223ENST00000490833 KRTAP10-6P60371 365 aaPredicted RBP3.32□□□□□ -1.88
FN1-223ENST00000490833 H1FX-AS1Q4G0G2 97 aa3.32□□□□□ -1.88
FN1-223ENST00000490833 FLG2Q5D862 2391 aaPredicted RBP3.31□□□□□ -1.88
FN1-223ENST00000490833 S4R3F8 94 aa3.3□□□□□ -1.88
FN1-223ENST00000490833 DYNC1H1Q14204 4646 aaKnown RBP3.29□□□□□ -1.88
FN1-223ENST00000490833 A8MU10 97 aa3.28□□□□□ -1.88
FN1-223ENST00000490833 SEC61BP60468 96 aaKnown RBP3.28□□□□□ -1.88
FN1-223ENST00000490833 CSAG1Q6PB30 78 aa3.27□□□□□ -1.89
FN1-223ENST00000490833 PKHD1L1Q86WI1 4243 aa3.27□□□□□ -1.89
FN1-223ENST00000490833 HERC1Q15751 4861 aa3.26□□□□□ -1.89
FN1-223ENST00000490833 APOBP04114 4563 aaKnown RBP3.26□□□□□ -1.89
FN1-223ENST00000490833 PKHD1P08F94 4074 aa3.26□□□□□ -1.89
FN1-223ENST00000490833 MT1HL1P0DM35 61 aa3.26□□□□□ -1.89
FN1-223ENST00000490833 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
FN1-223ENST00000490833 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
FN1-223ENST00000490833 UBR4Q5T4S7 5183 aa3.25□□□□□ -1.89
FN1-223ENST00000490833 H0YAA0 97 aa3.25□□□□□ -1.89
FN1-223ENST00000490833 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
FN1-223ENST00000490833 M0QZ58 72 aa3.24□□□□□ -1.89
FN1-223ENST00000490833 DMBT1Q9UGM3 2413 aaPredicted RBP3.23□□□□□ -1.89
FN1-223ENST00000490833 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
FN1-223ENST00000490833 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
FN1-223ENST00000490833 LINC01554Q52M75 96 aa3.18□□□□□ -1.9
FN1-223ENST00000490833 FAT1Q14517 4588 aa3.18□□□□□ -1.9
FN1-223ENST00000490833 ROMO1P60602 79 aa3.17□□□□□ -1.9
FN1-223ENST00000490833 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
FN1-223ENST00000490833 HSPG2P98160 4391 aa3.14□□□□□ -1.91
FN1-223ENST00000490833 TNXBP22105 4242 aa3.14□□□□□ -1.91
FN1-223ENST00000490833 ADM2Q7Z4H4 148 aa3.14□□□□□ -1.91
FN1-223ENST00000490833 FAT3Q8TDW7 4589 aa3.13□□□□□ -1.91
FN1-223ENST00000490833 KRTAP25-1Q3LHN0 102 aa3.13□□□□□ -1.91
FN1-223ENST00000490833 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
FN1-223ENST00000490833 CRIPTQ9P021 101 aa3.11□□□□□ -1.91
FN1-223ENST00000490833 PRAC1Q96KF2 57 aa3.09□□□□□ -1.91
FN1-223ENST00000490833 R4GN34 69 aa3.09□□□□□ -1.91
FN1-223ENST00000490833 A0A0D9SG42 100 aa3.07□□□□□ -1.92
FN1-223ENST00000490833 P0C880 135 aa3.07□□□□□ -1.92
FN1-223ENST00000490833 LRP1Q07954 4544 aaKnown RBP3.06□□□□□ -1.92
FN1-223ENST00000490833 SPINT4Q6UDR6 99 aa3.04□□□□□ -1.92
FN1-223ENST00000490833 MYCBP2O75592 4640 aa3.04□□□□□ -1.92
FN1-223ENST00000490833 KRTAP13-4Q3LI77 160 aa3.03□□□□□ -1.92
FN1-223ENST00000490833 KRTAP12-1P59990 96 aa3.02□□□□□ -1.93
FN1-223ENST00000490833 HMCN2Q8NDA2 5059 aa3.01□□□□□ -1.93
FN1-223ENST00000490833 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
FN1-223ENST00000490833 KRTAP12-2P59991 146 aa2.98□□□□□ -1.93
FN1-223ENST00000490833 RNF213Q63HN8 5207 aa2.96□□□□□ -1.94
FN1-223ENST00000490833 CAMK2N1Q7Z7J9 78 aa2.93□□□□□ -1.94
FN1-223ENST00000490833 LRP2P98164 4655 aa2.91□□□□□ -1.94
FN1-223ENST00000490833 KRTAP19-2Q3LHN2 52 aa2.89□□□□□ -1.95
FN1-223ENST00000490833 KRTAP4-1Q9BYQ7 146 aa2.88□□□□□ -1.95
FN1-223ENST00000490833 PLAC4Q8WY50 150 aa2.87□□□□□ -1.95
FN1-223ENST00000490833 TNP1P09430 55 aa2.86□□□□□ -1.95
FN1-223ENST00000490833 MT3P25713 68 aa2.85□□□□□ -1.95
FN1-223ENST00000490833 MUC17Q685J3 4493 aa2.84□□□□□ -1.95
FN1-223ENST00000490833 M0R2T5 61 aa2.83□□□□□ -1.96
FN1-223ENST00000490833 SPRR2GQ9BYE4 73 aa2.82□□□□□ -1.96
FN1-223ENST00000490833 C10orf95Q9H7T3 257 aa2.81□□□□□ -1.96
FN1-223ENST00000490833 FAT4Q6V0I7 4981 aa2.81□□□□□ -1.96
FN1-223ENST00000490833 LPAP08519 4548 aa2.8□□□□□ -1.96
FN1-223ENST00000490833 FLGP20930 4061 aaPredicted RBP2.8□□□□□ -1.96
FN1-223ENST00000490833 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
FN1-223ENST00000490833 FSIP2Q5CZC0 6907 aa2.76□□□□□ -1.97
FN1-223ENST00000490833 MUC2Q02817 5179 aa2.76□□□□□ -1.97
FN1-223ENST00000490833 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms