RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 H0YAA0 97 aa7□□□□□ -1.29
ARHGEF39-205ENST00000490638 DNAH8Q96JB1 4490 aa7□□□□□ -1.29
ARHGEF39-205ENST00000490638 VPS13DQ5THJ4 4388 aa6.99□□□□□ -1.29
ARHGEF39-205ENST00000490638 DNAH6Q9C0G6 4158 aa6.98□□□□□ -1.29
ARHGEF39-205ENST00000490638 KRTAP3-1Q9BYR8 98 aa6.96□□□□□ -1.29
ARHGEF39-205ENST00000490638 DNAH2Q9P225 4427 aa6.96□□□□□ -1.3
ARHGEF39-205ENST00000490638 DNAH17Q9UFH2 4485 aa6.95□□□□□ -1.3
ARHGEF39-205ENST00000490638 NDUFAF8A1L188 74 aa6.95□□□□□ -1.3
ARHGEF39-205ENST00000490638 LRP1BQ9NZR2 4599 aa6.93□□□□□ -1.3
ARHGEF39-205ENST00000490638 HYDINQ4G0P3 5121 aa6.88□□□□□ -1.31
ARHGEF39-205ENST00000490638 FAT1Q14517 4588 aa6.88□□□□□ -1.31
ARHGEF39-205ENST00000490638 HECTD4Q9Y4D8 3996 aa6.87□□□□□ -1.31
ARHGEF39-205ENST00000490638 ALMS1Q8TCU4 4167 aa6.84□□□□□ -1.32
ARHGEF39-205ENST00000490638 RYR1P21817 5038 aa6.82□□□□□ -1.32
ARHGEF39-205ENST00000490638 PP632Q6XCG6 107 aa6.82□□□□□ -1.32
ARHGEF39-205ENST00000490638 C10orf95Q9H7T3 257 aa6.82□□□□□ -1.32
ARHGEF39-205ENST00000490638 KIAA1109Q2LD37 5005 aa6.79□□□□□ -1.32
ARHGEF39-205ENST00000490638 DYNC1H1Q14204 4646 aaKnown RBP6.78□□□□□ -1.32
ARHGEF39-205ENST00000490638 A0A0A0MQY5 61 aa6.78□□□□□ -1.32
ARHGEF39-205ENST00000490638 DYNC2H1Q8NCM8 4307 aaKnown RBP6.75□□□□□ -1.33
ARHGEF39-205ENST00000490638 VPS13BQ7Z7G8 4022 aa6.75□□□□□ -1.33
ARHGEF39-205ENST00000490638 PKHD1P08F94 4074 aa6.74□□□□□ -1.33
ARHGEF39-205ENST00000490638 KRTAP12-2P59991 146 aa6.68□□□□□ -1.34
ARHGEF39-205ENST00000490638 MYCBP2O75592 4640 aa6.68□□□□□ -1.34
ARHGEF39-205ENST00000490638 KRTAP12-1P59990 96 aa6.64□□□□□ -1.35
ARHGEF39-205ENST00000490638 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
ARHGEF39-205ENST00000490638 RYR3Q15413 4870 aa6.63□□□□□ -1.35
ARHGEF39-205ENST00000490638 FAT2Q9NYQ8 4349 aa6.61□□□□□ -1.35
ARHGEF39-205ENST00000490638 LRP1Q07954 4544 aaKnown RBP6.58□□□□□ -1.36
ARHGEF39-205ENST00000490638 KRTAP3-3Q9BYR6 98 aa6.56□□□□□ -1.36
ARHGEF39-205ENST00000490638 KRTAP13-4Q3LI77 160 aa6.56□□□□□ -1.36
ARHGEF39-205ENST00000490638 KMT2CQ8NEZ4 4911 aaKnown RBP6.55□□□□□ -1.36
ARHGEF39-205ENST00000490638 SACSQ9NZJ4 4579 aa6.54□□□□□ -1.36
ARHGEF39-205ENST00000490638 FAT3Q8TDW7 4589 aa6.52□□□□□ -1.37
ARHGEF39-205ENST00000490638 APOBP04114 4563 aaKnown RBP6.49□□□□□ -1.37
ARHGEF39-205ENST00000490638 PKD1P98161 4303 aa6.46□□□□□ -1.37
ARHGEF39-205ENST00000490638 KRTAP3-2Q9BYR7 98 aa6.46□□□□□ -1.37
ARHGEF39-205ENST00000490638 KRTAP4-1Q9BYQ7 146 aa6.45□□□□□ -1.38
ARHGEF39-205ENST00000490638 KRTAP17-1Q9BYP8 105 aa6.39□□□□□ -1.39
ARHGEF39-205ENST00000490638 HERC2O95714 4834 aa6.38□□□□□ -1.39
ARHGEF39-205ENST00000490638 RYR2Q92736 4967 aa6.32□□□□□ -1.4
ARHGEF39-205ENST00000490638 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
ARHGEF39-205ENST00000490638 MT1HP80294 61 aa6.28□□□□□ -1.4
ARHGEF39-205ENST00000490638 BIRC6Q9NR09 4857 aa6.27□□□□□ -1.41
ARHGEF39-205ENST00000490638 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
ARHGEF39-205ENST00000490638 KRTAP10-12P60413 245 aa6.21□□□□□ -1.42
ARHGEF39-205ENST00000490638 LRP2P98164 4655 aa6.21□□□□□ -1.42
ARHGEF39-205ENST00000490638 HSPG2P98160 4391 aa6.19□□□□□ -1.42
ARHGEF39-205ENST00000490638 EPPK1P58107 5090 aaKnown RBP6.15□□□□□ -1.43
ARHGEF39-205ENST00000490638 MT2AP02795 61 aa6.15□□□□□ -1.43
ARHGEF39-205ENST00000490638 LPAP08519 4548 aa6.14□□□□□ -1.43
ARHGEF39-205ENST00000490638 PKHD1L1Q86WI1 4243 aa6.11□□□□□ -1.43
ARHGEF39-205ENST00000490638 PCLOQ9Y6V0 5065 aa6.05□□□□□ -1.44
ARHGEF39-205ENST00000490638 MT1FP04733 61 aa6.03□□□□□ -1.44
ARHGEF39-205ENST00000490638 ABCA13Q86UQ4 5058 aa6.01□□□□□ -1.45
ARHGEF39-205ENST00000490638 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
ARHGEF39-205ENST00000490638 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
ARHGEF39-205ENST00000490638 SPRR2GQ9BYE4 73 aa5.95□□□□□ -1.46
ARHGEF39-205ENST00000490638 MUC2Q02817 5179 aa5.95□□□□□ -1.46
ARHGEF39-205ENST00000490638 TNXBP22105 4242 aa5.95□□□□□ -1.46
ARHGEF39-205ENST00000490638 CRCT1Q9UGL9 99 aa5.93□□□□□ -1.46
ARHGEF39-205ENST00000490638 LCE3AQ5TA76 89 aa5.92□□□□□ -1.46
ARHGEF39-205ENST00000490638 HERC1Q15751 4861 aa5.89□□□□□ -1.47
ARHGEF39-205ENST00000490638 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
ARHGEF39-205ENST00000490638 KRTAP19-1Q8IUB9 90 aa5.72□□□□□ -1.49
ARHGEF39-205ENST00000490638 LCE2CQ5TA81 110 aa5.71□□□□□ -1.49
ARHGEF39-205ENST00000490638 RNF213Q63HN8 5207 aa5.71□□□□□ -1.5
ARHGEF39-205ENST00000490638 UBR4Q5T4S7 5183 aa5.68□□□□□ -1.5
ARHGEF39-205ENST00000490638 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
ARHGEF39-205ENST00000490638 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
ARHGEF39-205ENST00000490638 FAT4Q6V0I7 4981 aa5.67□□□□□ -1.5
ARHGEF39-205ENST00000490638 KRTAP19-8Q3LI54 63 aa5.63□□□□□ -1.51
ARHGEF39-205ENST00000490638 FSIP2Q5CZC0 6907 aa5.61□□□□□ -1.51
ARHGEF39-205ENST00000490638 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
ARHGEF39-205ENST00000490638 MT1BP07438 61 aa5.5□□□□□ -1.53
ARHGEF39-205ENST00000490638 KRTAP19-2Q3LHN2 52 aa5.5□□□□□ -1.53
ARHGEF39-205ENST00000490638 INE1O15225 51 aa5.49□□□□□ -1.53
ARHGEF39-205ENST00000490638 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
ARHGEF39-205ENST00000490638 KRTAP19-5Q3LI72 72 aa5.48□□□□□ -1.53
ARHGEF39-205ENST00000490638 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
ARHGEF39-205ENST00000490638 MT1XP80297 61 aa5.42□□□□□ -1.54
ARHGEF39-205ENST00000490638 MUC17Q685J3 4493 aa5.39□□□□□ -1.55
ARHGEF39-205ENST00000490638 LCE2BO14633 110 aa5.35□□□□□ -1.55
ARHGEF39-205ENST00000490638 HMCN2Q8NDA2 5059 aa5.33□□□□□ -1.56
ARHGEF39-205ENST00000490638 SPRR2EP22531 72 aa5.31□□□□□ -1.56
ARHGEF39-205ENST00000490638 SPRR2BP35325 72 aa5.31□□□□□ -1.56
ARHGEF39-205ENST00000490638 SPRR2AP35326 72 aa5.31□□□□□ -1.56
ARHGEF39-205ENST00000490638 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
ARHGEF39-205ENST00000490638 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
ARHGEF39-205ENST00000490638 LCE2AQ5TA79 106 aaPredicted RBP5.28□□□□□ -1.56
ARHGEF39-205ENST00000490638 KRTAP4-8Q9BYQ9 185 aa5.28□□□□□ -1.56
ARHGEF39-205ENST00000490638 FLGP20930 4061 aaPredicted RBP5.24□□□□□ -1.57
ARHGEF39-205ENST00000490638 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
ARHGEF39-205ENST00000490638 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
ARHGEF39-205ENST00000490638 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
ARHGEF39-205ENST00000490638 SPRR2DP22532 72 aa5.13□□□□□ -1.59
ARHGEF39-205ENST00000490638 USH2AO75445 5202 aa5.1□□□□□ -1.59
ARHGEF39-205ENST00000490638 MT1GP13640 62 aa5.08□□□□□ -1.6
ARHGEF39-205ENST00000490638 KRTAP19-6Q3LI70 58 aa5.08□□□□□ -1.6
ARHGEF39-205ENST00000490638 LCE2DQ5TA82 110 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms