RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 LPAP08519 4548 aa7.02□□□□□ -1.29
RIPPLY3-203ENST00000490393 PRR15LQ9BU68 103 aa7.02□□□□□ -1.29
RIPPLY3-203ENST00000490393 SPTSSBQ8NFR3 76 aa6.98□□□□□ -1.29
RIPPLY3-203ENST00000490393 SEC61BP60468 96 aaKnown RBP6.94□□□□□ -1.3
RIPPLY3-203ENST00000490393 A0A1B0GU69 56 aa6.9□□□□□ -1.3
RIPPLY3-203ENST00000490393 MUC17Q685J3 4493 aa6.89□□□□□ -1.31
RIPPLY3-203ENST00000490393 BRK1Q8WUW1 75 aa6.88□□□□□ -1.31
RIPPLY3-203ENST00000490393 H1FX-AS1Q4G0G2 97 aa6.85□□□□□ -1.31
RIPPLY3-203ENST00000490393 RBM12B-AS1Q9P1G2 102 aa6.85□□□□□ -1.31
RIPPLY3-203ENST00000490393 LCE2CQ5TA81 110 aa6.85□□□□□ -1.31
RIPPLY3-203ENST00000490393 PCLOQ9Y6V0 5065 aa6.85□□□□□ -1.31
RIPPLY3-203ENST00000490393 A6NED7 52 aa6.84□□□□□ -1.31
RIPPLY3-203ENST00000490393 LCA10Q71F78 164 aa6.81□□□□□ -1.32
RIPPLY3-203ENST00000490393 S4R3F8 94 aa6.81□□□□□ -1.32
RIPPLY3-203ENST00000490393 CDC42SE1Q9NRR8 79 aa6.79□□□□□ -1.32
RIPPLY3-203ENST00000490393 KRTAP4-1Q9BYQ7 146 aa6.76□□□□□ -1.33
RIPPLY3-203ENST00000490393 HERC1Q15751 4861 aa6.76□□□□□ -1.33
RIPPLY3-203ENST00000490393 HMCN2Q8NDA2 5059 aa6.75□□□□□ -1.33
RIPPLY3-203ENST00000490393 UQCR11O14957 56 aa6.75□□□□□ -1.33
RIPPLY3-203ENST00000490393 PMAIP1Q13794 54 aa6.75□□□□□ -1.33
RIPPLY3-203ENST00000490393 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
RIPPLY3-203ENST00000490393 A8MU10 97 aa6.73□□□□□ -1.33
RIPPLY3-203ENST00000490393 SPATA8Q6RVD6 105 aa6.73□□□□□ -1.33
RIPPLY3-203ENST00000490393 MIR22HGQ0VDD5 57 aa6.67□□□□□ -1.34
RIPPLY3-203ENST00000490393 CSAG1Q6PB30 78 aa6.67□□□□□ -1.34
RIPPLY3-203ENST00000490393 A0A1B0GU33 70 aa6.66□□□□□ -1.34
RIPPLY3-203ENST00000490393 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
RIPPLY3-203ENST00000490393 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
RIPPLY3-203ENST00000490393 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
RIPPLY3-203ENST00000490393 H0YAA0 97 aa6.58□□□□□ -1.36
RIPPLY3-203ENST00000490393 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
RIPPLY3-203ENST00000490393 P0C880 135 aa6.53□□□□□ -1.36
RIPPLY3-203ENST00000490393 FLGP20930 4061 aaPredicted RBP6.53□□□□□ -1.36
RIPPLY3-203ENST00000490393 MUC2Q02817 5179 aa6.52□□□□□ -1.37
RIPPLY3-203ENST00000490393 A6NN06 94 aa6.5□□□□□ -1.37
RIPPLY3-203ENST00000490393 KRTAP13-4Q3LI77 160 aa6.45□□□□□ -1.38
RIPPLY3-203ENST00000490393 KTN1-AS1Q86SY8 53 aa6.44□□□□□ -1.38
RIPPLY3-203ENST00000490393 M0QZ58 72 aa6.42□□□□□ -1.38
RIPPLY3-203ENST00000490393 H3BS24 57 aa6.41□□□□□ -1.38
RIPPLY3-203ENST00000490393 RNF213Q63HN8 5207 aa6.4□□□□□ -1.39
RIPPLY3-203ENST00000490393 UBR4Q5T4S7 5183 aa6.34□□□□□ -1.39
RIPPLY3-203ENST00000490393 K7ERS5 55 aa6.34□□□□□ -1.39
RIPPLY3-203ENST00000490393 A0A0D9SG42 100 aa6.31□□□□□ -1.4
RIPPLY3-203ENST00000490393 R4GN34 69 aa6.28□□□□□ -1.4
RIPPLY3-203ENST00000490393 MT1HP80294 61 aa6.25□□□□□ -1.41
RIPPLY3-203ENST00000490393 FAT4Q6V0I7 4981 aa6.25□□□□□ -1.41
RIPPLY3-203ENST00000490393 KRTAP12-1P59990 96 aa6.23□□□□□ -1.41
RIPPLY3-203ENST00000490393 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
RIPPLY3-203ENST00000490393 KRTAP12-2P59991 146 aa6.21□□□□□ -1.42
RIPPLY3-203ENST00000490393 M0R2T5 61 aa6.16□□□□□ -1.42
RIPPLY3-203ENST00000490393 SPINT4Q6UDR6 99 aa6.16□□□□□ -1.42
RIPPLY3-203ENST00000490393 LINC01554Q52M75 96 aa6.14□□□□□ -1.43
RIPPLY3-203ENST00000490393 ROMO1P60602 79 aa6.12□□□□□ -1.43
RIPPLY3-203ENST00000490393 PRAC1Q96KF2 57 aa6.07□□□□□ -1.44
RIPPLY3-203ENST00000490393 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
RIPPLY3-203ENST00000490393 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
RIPPLY3-203ENST00000490393 MT2AP02795 61 aa6.04□□□□□ -1.44
RIPPLY3-203ENST00000490393 MT1FP04733 61 aa6□□□□□ -1.45
RIPPLY3-203ENST00000490393 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
RIPPLY3-203ENST00000490393 KRTAP10-10P60014 251 aa5.99□□□□□ -1.45
RIPPLY3-203ENST00000490393 KRTAP25-1Q3LHN0 102 aa5.94□□□□□ -1.46
RIPPLY3-203ENST00000490393 CAMK2N1Q7Z7J9 78 aa5.9□□□□□ -1.47
RIPPLY3-203ENST00000490393 C10orf95Q9H7T3 257 aa5.9□□□□□ -1.47
RIPPLY3-203ENST00000490393 A0A0A0MQY5 61 aa5.88□□□□□ -1.47
RIPPLY3-203ENST00000490393 KRTAP19-8Q3LI54 63 aa5.86□□□□□ -1.47
RIPPLY3-203ENST00000490393 PLAC4Q8WY50 150 aa5.85□□□□□ -1.47
RIPPLY3-203ENST00000490393 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
RIPPLY3-203ENST00000490393 MT1BP07438 61 aa5.75□□□□□ -1.49
RIPPLY3-203ENST00000490393 TNP1P09430 55 aa5.67□□□□□ -1.5
RIPPLY3-203ENST00000490393 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
RIPPLY3-203ENST00000490393 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
RIPPLY3-203ENST00000490393 KRTAP10-5P60370 271 aa5.6□□□□□ -1.51
RIPPLY3-203ENST00000490393 MT1XP80297 61 aa5.59□□□□□ -1.51
RIPPLY3-203ENST00000490393 KRTAP9-6A0A140TA67 174 aa5.58□□□□□ -1.52
RIPPLY3-203ENST00000490393 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
RIPPLY3-203ENST00000490393 USH2AO75445 5202 aa5.46□□□□□ -1.54
RIPPLY3-203ENST00000490393 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
RIPPLY3-203ENST00000490393 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
RIPPLY3-203ENST00000490393 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
RIPPLY3-203ENST00000490393 KRTAP4-6Q9BYQ5 205 aa5.37□□□□□ -1.55
RIPPLY3-203ENST00000490393 KRTAP10-7P60409 375 aaPredicted RBP5.36□□□□□ -1.55
RIPPLY3-203ENST00000490393 KRTAP10-12P60413 245 aa5.34□□□□□ -1.55
RIPPLY3-203ENST00000490393 KRTAP8-1Q8IUC2 63 aa5.33□□□□□ -1.56
RIPPLY3-203ENST00000490393 KRTAP15-1Q3LI76 137 aa5.32□□□□□ -1.56
RIPPLY3-203ENST00000490393 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
RIPPLY3-203ENST00000490393 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
RIPPLY3-203ENST00000490393 SSPOA2VEC9 5147 aa5.26□□□□□ -1.57
RIPPLY3-203ENST00000490393 NDUFAF8A1L188 74 aa5.19□□□□□ -1.58
RIPPLY3-203ENST00000490393 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
RIPPLY3-203ENST00000490393 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
RIPPLY3-203ENST00000490393 FSIP2Q5CZC0 6907 aa5.11□□□□□ -1.59
RIPPLY3-203ENST00000490393 KRTAP4-8A0A0G2JLE6 195 aa5.11□□□□□ -1.59
RIPPLY3-203ENST00000490393 KRTAP4-8Q9BYQ9 185 aa5.11□□□□□ -1.59
RIPPLY3-203ENST00000490393 KMT2DO14686 5537 aa5.09□□□□□ -1.6
RIPPLY3-203ENST00000490393 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
RIPPLY3-203ENST00000490393 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
RIPPLY3-203ENST00000490393 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
RIPPLY3-203ENST00000490393 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
RIPPLY3-203ENST00000490393 CRCT1Q9UGL9 99 aa4.95□□□□□ -1.62
RIPPLY3-203ENST00000490393 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms