RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 HCG22E2RYF7 251 aa6.11□□□□□ -1.43
VARS-227ENST00000489979 KLKP1Q107X0 134 aa6.1□□□□□ -1.43
VARS-227ENST00000489979 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
VARS-227ENST00000489979 J3QR89 54 aa6.09□□□□□ -1.43
VARS-227ENST00000489979 SPRR2EP22531 72 aa6.09□□□□□ -1.43
VARS-227ENST00000489979 SPRR2BP35325 72 aa6.09□□□□□ -1.43
VARS-227ENST00000489979 SPRR2AP35326 72 aa6.09□□□□□ -1.43
VARS-227ENST00000489979 ATP5EP2Q5VTU8 51 aa6.09□□□□□ -1.43
VARS-227ENST00000489979 SPRR2FQ96RM1 72 aa6.09□□□□□ -1.43
VARS-227ENST00000489979 LCA10Q71F78 164 aa6.08□□□□□ -1.44
VARS-227ENST00000489979 KRTAP2-2Q9BYT5 123 aa6.03□□□□□ -1.44
VARS-227ENST00000489979 KRTAP2-1Q9BYU5 128 aa6.03□□□□□ -1.44
VARS-227ENST00000489979 HIST1H4AP62805 103 aaKnown RBP6.02□□□□□ -1.45
VARS-227ENST00000489979 LINC00643Q86TS7 51 aa6.02□□□□□ -1.45
VARS-227ENST00000489979 C1orf64Q8NEQ6 169 aa6.02□□□□□ -1.45
VARS-227ENST00000489979 TP53AIP1Q9HCN2 124 aa6.02□□□□□ -1.45
VARS-227ENST00000489979 K7ERU9 68 aa5.98□□□□□ -1.45
VARS-227ENST00000489979 CRIPTQ9P021 101 aa5.97□□□□□ -1.45
VARS-227ENST00000489979 LCE1AQ5T7P2 110 aa5.95□□□□□ -1.46
VARS-227ENST00000489979 KRTAP3-3Q9BYR6 98 aa5.95□□□□□ -1.46
VARS-227ENST00000489979 A0A087WVE0 104 aa5.92□□□□□ -1.46
VARS-227ENST00000489979 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
VARS-227ENST00000489979 MT-ATP8P03928 68 aa5.91□□□□□ -1.46
VARS-227ENST00000489979 TRAV22A0A0B4J277 110 aa5.89□□□□□ -1.47
VARS-227ENST00000489979 SPRR2DP22532 72 aa5.89□□□□□ -1.47
VARS-227ENST00000489979 UQCRQO14949 82 aa5.88□□□□□ -1.47
VARS-227ENST00000489979 PRO2289Q9P1D8 64 aa5.88□□□□□ -1.47
VARS-227ENST00000489979 ATOX1O00244 68 aa5.86□□□□□ -1.47
VARS-227ENST00000489979 MT1XP80297 61 aa5.86□□□□□ -1.47
VARS-227ENST00000489979 LOC101927531A0A1B0GV80 90 aa5.85□□□□□ -1.47
VARS-227ENST00000489979 SCGB1A1P11684 91 aa5.83□□□□□ -1.48
VARS-227ENST00000489979 H0Y9P7 68 aa5.82□□□□□ -1.48
VARS-227ENST00000489979 MP68P56378 58 aa5.8□□□□□ -1.48
VARS-227ENST00000489979 CYP4F30PQ9H0H9 118 aa5.79□□□□□ -1.48
VARS-227ENST00000489979 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
VARS-227ENST00000489979 A8MUN3 132 aa5.77□□□□□ -1.49
VARS-227ENST00000489979 LCE3BQ5TA77 95 aa5.77□□□□□ -1.49
VARS-227ENST00000489979 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
VARS-227ENST00000489979 KRTAP4-8Q9BYQ9 185 aa5.76□□□□□ -1.49
VARS-227ENST00000489979 H0YAA0 97 aa5.75□□□□□ -1.49
VARS-227ENST00000489979 PLAC4Q8WY50 150 aa5.75□□□□□ -1.49
VARS-227ENST00000489979 LINC00208Q96KT6 92 aa5.74□□□□□ -1.49
VARS-227ENST00000489979 OCR1Q9BZK8 76 aa5.74□□□□□ -1.49
VARS-227ENST00000489979 GPR98Q8WXG9 6306 aa5.73□□□□□ -1.49
VARS-227ENST00000489979 H3BPC8 53 aa5.73□□□□□ -1.49
VARS-227ENST00000489979 SMIM20Q8N5G0 67 aa5.72□□□□□ -1.49
VARS-227ENST00000489979 ADM2Q7Z4H4 148 aa5.71□□□□□ -1.5
VARS-227ENST00000489979 NDUFC1O43677 76 aa5.7□□□□□ -1.5
VARS-227ENST00000489979 TRAV7A0A075B6U4 112 aa5.64□□□□□ -1.51
VARS-227ENST00000489979 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
VARS-227ENST00000489979 R4GN34 69 aa5.59□□□□□ -1.51
VARS-227ENST00000489979 KRTAP10-12P60413 245 aa5.56□□□□□ -1.52
VARS-227ENST00000489979 M0QZ58 72 aa5.53□□□□□ -1.52
VARS-227ENST00000489979 P0C880 135 aa5.53□□□□□ -1.52
VARS-227ENST00000489979 SERP2Q8N6R1 65 aa5.53□□□□□ -1.52
VARS-227ENST00000489979 SNURFQ9Y675 71 aa5.53□□□□□ -1.52
VARS-227ENST00000489979 DSTQ03001 7570 aaKnown RBP5.52□□□□□ -1.53
VARS-227ENST00000489979 DMAC1Q96GE9 116 aa5.51□□□□□ -1.53
VARS-227ENST00000489979 C20orf197Q8N268 126 aa5.5□□□□□ -1.53
VARS-227ENST00000489979 LINC01554Q52M75 96 aa5.49□□□□□ -1.53
VARS-227ENST00000489979 ANAPC13Q9BS18 74 aa5.49□□□□□ -1.53
VARS-227ENST00000489979 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
VARS-227ENST00000489979 ACYP2P14621 99 aa5.48□□□□□ -1.53
VARS-227ENST00000489979 COX7CP15954 63 aa5.48□□□□□ -1.53
VARS-227ENST00000489979 CYSTM1Q9H1C7 97 aa5.46□□□□□ -1.54
VARS-227ENST00000489979 SPTSSBQ8NFR3 76 aa5.45□□□□□ -1.54
VARS-227ENST00000489979 CCDC179H3BU77 68 aa5.44□□□□□ -1.54
VARS-227ENST00000489979 CHKB-CPT1BH3BT56 60 aa5.42□□□□□ -1.54
VARS-227ENST00000489979 SPANXA2-OT1Q8N9U9 137 aa5.41□□□□□ -1.54
VARS-227ENST00000489979 KRTAP3-2Q9BYR7 98 aa5.4□□□□□ -1.54
VARS-227ENST00000489979 H7BZZ5 65 aa5.33□□□□□ -1.56
VARS-227ENST00000489979 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
VARS-227ENST00000489979 LCE1DQ5T752 114 aa5.3□□□□□ -1.56
VARS-227ENST00000489979 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
VARS-227ENST00000489979 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
VARS-227ENST00000489979 MT1EP04732 61 aa5.23□□□□□ -1.57
VARS-227ENST00000489979 PCP4P48539 62 aa5.23□□□□□ -1.57
VARS-227ENST00000489979 COA5Q86WW8 74 aa5.23□□□□□ -1.57
VARS-227ENST00000489979 HMCN1Q96RW7 5635 aa5.23□□□□□ -1.57
VARS-227ENST00000489979 MT4P47944 62 aa5.2□□□□□ -1.58
VARS-227ENST00000489979 SEC61GP60059 68 aa5.19□□□□□ -1.58
VARS-227ENST00000489979 AHNAK2Q8IVF2 5795 aa5.18□□□□□ -1.58
VARS-227ENST00000489979 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
VARS-227ENST00000489979 ATP5EP56381 51 aaPredicted RBP5.15□□□□□ -1.59
VARS-227ENST00000489979 TMEM258P61165 79 aa5.15□□□□□ -1.59
VARS-227ENST00000489979 SERP1Q9Y6X1 66 aa5.15□□□□□ -1.59
VARS-227ENST00000489979 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
VARS-227ENST00000489979 MT1GP13640 62 aa5.08□□□□□ -1.6
VARS-227ENST00000489979 CAMK2N1Q7Z7J9 78 aa5.08□□□□□ -1.6
VARS-227ENST00000489979 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
VARS-227ENST00000489979 A0A1B0GU69 56 aa5.02□□□□□ -1.61
VARS-227ENST00000489979 KRTAP19-5Q3LI72 72 aa5.01□□□□□ -1.61
VARS-227ENST00000489979 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
VARS-227ENST00000489979 KRTAP13-4Q3LI77 160 aa5□□□□□ -1.61
VARS-227ENST00000489979 KRTAP5-4Q6L8H1 288 aa5□□□□□ -1.61
VARS-227ENST00000489979 MT1MQ8N339 61 aa5□□□□□ -1.61
VARS-227ENST00000489979 PRR15LQ9BU68 103 aa4.99□□□□□ -1.61
VARS-227ENST00000489979 A0A1B0GU33 70 aa4.98□□□□□ -1.61
VARS-227ENST00000489979 A0A0D9SG42 100 aa4.97□□□□□ -1.61
VARS-227ENST00000489979 KRTAP5-7Q6L8G8 165 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms