RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 LRP2P98164 4655 aa13.54□□□□□ -0.24
KCNC4-207ENST00000489935 UQCR11O14957 56 aa13.54□□□□□ -0.24
KCNC4-207ENST00000489935 PMAIP1Q13794 54 aa13.54□□□□□ -0.24
KCNC4-207ENST00000489935 SPATA8Q6RVD6 105 aa13.52□□□□□ -0.24
KCNC4-207ENST00000489935 LPAP08519 4548 aa13.51□□□□□ -0.25
KCNC4-207ENST00000489935 MIR22HGQ0VDD5 57 aa13.47□□□□□ -0.25
KCNC4-207ENST00000489935 KRTAP3-3Q9BYR6 98 aa13.43□□□□□ -0.26
KCNC4-207ENST00000489935 A6NN06 94 aa13.4□□□□□ -0.27
KCNC4-207ENST00000489935 HERC2O95714 4834 aa13.35□□□□□ -0.27
KCNC4-207ENST00000489935 J3QL48 77 aa13.34□□□□□ -0.27
KCNC4-207ENST00000489935 S4R3F8 94 aa13.33□□□□□ -0.28
KCNC4-207ENST00000489935 BIRC6Q9NR09 4857 aa13.28□□□□□ -0.28
KCNC4-207ENST00000489935 A0A1B0GU33 70 aa13.28□□□□□ -0.28
KCNC4-207ENST00000489935 H1FX-AS1Q4G0G2 97 aa13.28□□□□□ -0.28
KCNC4-207ENST00000489935 H0YAA0 97 aa13.24□□□□□ -0.29
KCNC4-207ENST00000489935 RBM12B-AS1Q9P1G2 102 aa13.18□□□□□ -0.3
KCNC4-207ENST00000489935 KRTAP10-6P60371 365 aaPredicted RBP13.14□□□□□ -0.31
KCNC4-207ENST00000489935 SEC61BP60468 96 aaKnown RBP13.12□□□□□ -0.31
KCNC4-207ENST00000489935 KTN1-AS1Q86SY8 53 aa13.12□□□□□ -0.31
KCNC4-207ENST00000489935 KRTAP3-2Q9BYR7 98 aa13.11□□□□□ -0.31
KCNC4-207ENST00000489935 KRTAP4-1Q9BYQ7 146 aa13.02□□□□□ -0.32
KCNC4-207ENST00000489935 MUC17Q685J3 4493 aa13.01□□□□□ -0.33
KCNC4-207ENST00000489935 P0C880 135 aa12.94□□□□□ -0.34
KCNC4-207ENST00000489935 CSAG1Q6PB30 78 aa12.94□□□□□ -0.34
KCNC4-207ENST00000489935 KRTAP13-4Q3LI77 160 aa12.91□□□□□ -0.34
KCNC4-207ENST00000489935 ADM2Q7Z4H4 148 aa12.88□□□□□ -0.35
KCNC4-207ENST00000489935 PCLOQ9Y6V0 5065 aa12.8□□□□□ -0.36
KCNC4-207ENST00000489935 KRTAP19-2Q3LHN2 52 aa12.74□□□□□ -0.37
KCNC4-207ENST00000489935 PRAC1Q96KF2 57 aa12.72□□□□□ -0.37
KCNC4-207ENST00000489935 A0A0D9SG42 100 aa12.7□□□□□ -0.38
KCNC4-207ENST00000489935 HERC1Q15751 4861 aa12.69□□□□□ -0.38
KCNC4-207ENST00000489935 K7ERS5 55 aa12.63□□□□□ -0.39
KCNC4-207ENST00000489935 HMCN2Q8NDA2 5059 aa12.58□□□□□ -0.4
KCNC4-207ENST00000489935 MUC2Q02817 5179 aa12.57□□□□□ -0.4
KCNC4-207ENST00000489935 M0QZ58 72 aa12.5□□□□□ -0.41
KCNC4-207ENST00000489935 KRTAP12-2P59991 146 aa12.43□□□□□ -0.42
KCNC4-207ENST00000489935 FLGP20930 4061 aaPredicted RBP12.4□□□□□ -0.42
KCNC4-207ENST00000489935 KRTAP12-1P59990 96 aa12.39□□□□□ -0.43
KCNC4-207ENST00000489935 LORP23490 312 aaPredicted RBP12.37□□□□□ -0.43
KCNC4-207ENST00000489935 SPINT4Q6UDR6 99 aa12.32□□□□□ -0.44
KCNC4-207ENST00000489935 R4GN34 69 aa12.32□□□□□ -0.44
KCNC4-207ENST00000489935 ROMO1P60602 79 aa12.31□□□□□ -0.44
KCNC4-207ENST00000489935 LINC01554Q52M75 96 aa12.23□□□□□ -0.45
KCNC4-207ENST00000489935 LCE2CQ5TA81 110 aa12.18□□□□□ -0.46
KCNC4-207ENST00000489935 CRIPTQ9P021 101 aa12.18□□□□□ -0.46
KCNC4-207ENST00000489935 KRTAP25-1Q3LHN0 102 aa12.17□□□□□ -0.46
KCNC4-207ENST00000489935 UBR4Q5T4S7 5183 aa12.01□□□□□ -0.49
KCNC4-207ENST00000489935 RNF213Q63HN8 5207 aa12.01□□□□□ -0.49
KCNC4-207ENST00000489935 FAT4Q6V0I7 4981 aa11.99□□□□□ -0.49
KCNC4-207ENST00000489935 MT1HP80294 61 aa11.87□□□□□ -0.51
KCNC4-207ENST00000489935 C10orf95Q9H7T3 257 aa11.85□□□□□ -0.51
KCNC4-207ENST00000489935 M0R2T5 61 aa11.78□□□□□ -0.52
KCNC4-207ENST00000489935 CAMK2N1Q7Z7J9 78 aa11.61□□□□□ -0.55
KCNC4-207ENST00000489935 SPRR2GQ9BYE4 73 aa11.57□□□□□ -0.56
KCNC4-207ENST00000489935 KRTAP19-1Q8IUB9 90 aa11.56□□□□□ -0.56
KCNC4-207ENST00000489935 MT2AP02795 61 aa11.54□□□□□ -0.56
KCNC4-207ENST00000489935 KRTAP9-8Q9BYQ0 159 aa11.54□□□□□ -0.56
KCNC4-207ENST00000489935 MT1FP04733 61 aa11.52□□□□□ -0.56
KCNC4-207ENST00000489935 KRTAP10-10P60014 251 aa11.47□□□□□ -0.57
KCNC4-207ENST00000489935 PLAC4Q8WY50 150 aa11.3□□□□□ -0.6
KCNC4-207ENST00000489935 KRTAP19-8Q3LI54 63 aa11.16□□□□□ -0.62
KCNC4-207ENST00000489935 TNP1P09430 55 aa11.12□□□□□ -0.63
KCNC4-207ENST00000489935 PP632Q6XCG6 107 aa11.08□□□□□ -0.64
KCNC4-207ENST00000489935 KRTAP9-3Q9BYQ3 159 aa11.08□□□□□ -0.64
KCNC4-207ENST00000489935 MT1BP07438 61 aa11.03□□□□□ -0.64
KCNC4-207ENST00000489935 KRTAP15-1Q3LI76 137 aa10.98□□□□□ -0.65
KCNC4-207ENST00000489935 LCE2AQ5TA79 106 aaPredicted RBP10.92□□□□□ -0.66
KCNC4-207ENST00000489935 KRTAP23-1A1A580 65 aa10.9□□□□□ -0.66
KCNC4-207ENST00000489935 KRTAP10-5P60370 271 aa10.83□□□□□ -0.68
KCNC4-207ENST00000489935 MT1XP80297 61 aa10.82□□□□□ -0.68
KCNC4-207ENST00000489935 LCE2BO14633 110 aa10.72□□□□□ -0.69
KCNC4-207ENST00000489935 LCE3AQ5TA76 89 aa10.65□□□□□ -0.7
KCNC4-207ENST00000489935 KRTAP10-7P60409 375 aaPredicted RBP10.47□□□□□ -0.73
KCNC4-207ENST00000489935 PRO2289Q9P1D8 64 aa10.46□□□□□ -0.73
KCNC4-207ENST00000489935 NDUFAF8A1L188 74 aa10.43□□□□□ -0.74
KCNC4-207ENST00000489935 KRTAP10-12P60413 245 aa10.41□□□□□ -0.74
KCNC4-207ENST00000489935 KRTAP8-1Q8IUC2 63 aa10.39□□□□□ -0.75
KCNC4-207ENST00000489935 USH2AO75445 5202 aa10.37□□□□□ -0.75
KCNC4-207ENST00000489935 H3BS24 57 aa10.28□□□□□ -0.76
KCNC4-207ENST00000489935 SPRR5A0A1B0GTR4 108 aa10.17□□□□□ -0.78
KCNC4-207ENST00000489935 KRTAP12-3P60328 96 aa10.15□□□□□ -0.78
KCNC4-207ENST00000489935 LUZP6Q538Z0 58 aa10.06□□□□□ -0.8
KCNC4-207ENST00000489935 KRTAP4-8A0A0G2JLE6 195 aa9.95□□□□□ -0.82
KCNC4-207ENST00000489935 KRTAP4-8Q9BYQ9 185 aa9.95□□□□□ -0.82
KCNC4-207ENST00000489935 KMT2DO14686 5537 aa9.95□□□□□ -0.82
KCNC4-207ENST00000489935 KRTAP19-5Q3LI72 72 aa9.94□□□□□ -0.82
KCNC4-207ENST00000489935 SSPOA2VEC9 5147 aa9.92□□□□□ -0.82
KCNC4-207ENST00000489935 KRTAP19-6Q3LI70 58 aa9.79□□□□□ -0.84
KCNC4-207ENST00000489935 KRTAP19-7Q3SYF9 63 aa9.66□□□□□ -0.86
KCNC4-207ENST00000489935 FSIP2Q5CZC0 6907 aa9.65□□□□□ -0.86
KCNC4-207ENST00000489935 LCE2DQ5TA82 110 aaPredicted RBP9.59□□□□□ -0.87
KCNC4-207ENST00000489935 LCE3CQ5T5A8 94 aa9.55□□□□□ -0.88
KCNC4-207ENST00000489935 MT1EP04732 61 aa9.41□□□□□ -0.9
KCNC4-207ENST00000489935 FCGBPQ9Y6R7 5405 aaPredicted RBP9.33□□□□□ -0.92
KCNC4-207ENST00000489935 MT1LQ93083 61 aa9.32□□□□□ -0.92
KCNC4-207ENST00000489935 KRTAP4-7Q9BYR0 210 aa9.28□□□□□ -0.92
KCNC4-207ENST00000489935 KRTAP19-4Q3LI73 84 aa9.19□□□□□ -0.94
KCNC4-207ENST00000489935 KRTAP9-6A8MVA2 160 aa9.17□□□□□ -0.94
KCNC4-207ENST00000489935 A0A0A0MQY5 61 aa9.13□□□□□ -0.95
KCNC4-207ENST00000489935 KRTAP9-2Q9BYQ4 174 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms