RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
CNOT9-207ENST00000489687 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
CNOT9-207ENST00000489687 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
CNOT9-207ENST00000489687 ZNF861PO60384 105 aa3.4□□□□□ -1.87
CNOT9-207ENST00000489687 PRLHP81277 87 aa3.4□□□□□ -1.87
CNOT9-207ENST00000489687 KRTAP4-16G5E9R7 235 aaPredicted RBP3.39□□□□□ -1.87
CNOT9-207ENST00000489687 IGKV2-30P06310 120 aa3.39□□□□□ -1.87
CNOT9-207ENST00000489687 KRTAP4-8A0A0G2JLE6 195 aa3.38□□□□□ -1.87
CNOT9-207ENST00000489687 KRTAP13-2Q52LG2 175 aa3.38□□□□□ -1.87
CNOT9-207ENST00000489687 KRTAP13-1Q8IUC0 172 aa3.38□□□□□ -1.87
CNOT9-207ENST00000489687 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
CNOT9-207ENST00000489687 A8MWP4 228 aa3.37□□□□□ -1.87
CNOT9-207ENST00000489687 Q6ZRX8 168 aa3.37□□□□□ -1.87
CNOT9-207ENST00000489687 TYMSOSQ8TAI1 123 aa3.37□□□□□ -1.87
CNOT9-207ENST00000489687 HRES1P13985 223 aa3.36□□□□□ -1.87
CNOT9-207ENST00000489687 ROMO1P60602 79 aa3.36□□□□□ -1.87
CNOT9-207ENST00000489687 SPAG11AQ6PDA7 123 aa3.36□□□□□ -1.87
CNOT9-207ENST00000489687 A0A087WSZ3 146 aa3.35□□□□□ -1.87
CNOT9-207ENST00000489687 LINC00472Q9H8W2 130 aa3.35□□□□□ -1.87
CNOT9-207ENST00000489687 UQCR11O14957 56 aa3.34□□□□□ -1.87
CNOT9-207ENST00000489687 LINC00304Q8N9R0 145 aa3.34□□□□□ -1.87
CNOT9-207ENST00000489687 SPRR1BP22528 89 aa3.33□□□□□ -1.88
CNOT9-207ENST00000489687 ACYP2P14621 99 aa3.32□□□□□ -1.88
CNOT9-207ENST00000489687 MMP24-AS1A0A0U1RRL7 71 aa3.31□□□□□ -1.88
CNOT9-207ENST00000489687 CSAG1Q6PB30 78 aa3.31□□□□□ -1.88
CNOT9-207ENST00000489687 ADM2Q7Z4H4 148 aa3.31□□□□□ -1.88
CNOT9-207ENST00000489687 WFDC13Q8IUB5 93 aa3.31□□□□□ -1.88
CNOT9-207ENST00000489687 MIR22HGQ0VDD5 57 aa3.3□□□□□ -1.88
CNOT9-207ENST00000489687 KRTAP25-1Q3LHN0 102 aa3.3□□□□□ -1.88
CNOT9-207ENST00000489687 IGFL1Q6UW32 110 aa3.3□□□□□ -1.88
CNOT9-207ENST00000489687 ZNF706Q9Y5V0 76 aaPredicted RBP3.3□□□□□ -1.88
CNOT9-207ENST00000489687 DMAC1Q96GE9 116 aa3.29□□□□□ -1.88
CNOT9-207ENST00000489687 IGLV9-49A0A0B4J1Y8 123 aa3.27□□□□□ -1.89
CNOT9-207ENST00000489687 A0A1B0GU69 56 aa3.27□□□□□ -1.89
CNOT9-207ENST00000489687 TPRXLQ17RH7 258 aa3.27□□□□□ -1.89
CNOT9-207ENST00000489687 IGKV2D-30A0A075B6S6 120 aa3.26□□□□□ -1.89
CNOT9-207ENST00000489687 KRTAP13-3Q3SY46 172 aa3.26□□□□□ -1.89
CNOT9-207ENST00000489687 KRTAP4-7Q9BYR0 210 aa3.26□□□□□ -1.89
CNOT9-207ENST00000489687 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
CNOT9-207ENST00000489687 LINC00483Q53H64 154 aa3.24□□□□□ -1.89
CNOT9-207ENST00000489687 DEFB105AQ8NG35 78 aa3.24□□□□□ -1.89
CNOT9-207ENST00000489687 KRTAP4-1Q9BYQ7 146 aa3.24□□□□□ -1.89
CNOT9-207ENST00000489687 C8orf17Q9NRJ1 99 aa3.23□□□□□ -1.89
CNOT9-207ENST00000489687 FSIP2Q5CZC0 6907 aa3.23□□□□□ -1.89
CNOT9-207ENST00000489687 A8MUU9 505 aa3.22□□□□□ -1.89
CNOT9-207ENST00000489687 DEFB116Q30KQ4 102 aa3.22□□□□□ -1.89
CNOT9-207ENST00000489687 PCOTHQ58A44 107 aa3.21□□□□□ -1.9
CNOT9-207ENST00000489687 MRPL34Q9BQ48 92 aaKnown RBP3.21□□□□□ -1.9
CNOT9-207ENST00000489687 SPINK1P00995 79 aa3.2□□□□□ -1.9
CNOT9-207ENST00000489687 Q96NJ1 140 aa3.2□□□□□ -1.9
CNOT9-207ENST00000489687 A0A1B0GVX0 72 aa3.19□□□□□ -1.9
CNOT9-207ENST00000489687 P0C880 135 aa3.19□□□□□ -1.9
CNOT9-207ENST00000489687 A0A0G2JQZ4 141 aa3.18□□□□□ -1.9
CNOT9-207ENST00000489687 C9orf92A6NGG3 77 aa3.18□□□□□ -1.9
CNOT9-207ENST00000489687 KRTAP16-1A8MUX0 517 aa3.18□□□□□ -1.9
CNOT9-207ENST00000489687 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
CNOT9-207ENST00000489687 Q5W150 140 aa3.17□□□□□ -1.9
CNOT9-207ENST00000489687 FLGP20930 4061 aaPredicted RBP3.15□□□□□ -1.91
CNOT9-207ENST00000489687 RPS29P62273 56 aaKnown RBP3.15□□□□□ -1.91
CNOT9-207ENST00000489687 SSBP3-AS1Q7Z2R9 100 aa3.15□□□□□ -1.91
CNOT9-207ENST00000489687 C20orf166-AS1Q96NR2 134 aa3.15□□□□□ -1.91
CNOT9-207ENST00000489687 KRTAP19-2Q3LHN2 52 aa3.13□□□□□ -1.91
CNOT9-207ENST00000489687 MT3P25713 68 aa3.12□□□□□ -1.91
CNOT9-207ENST00000489687 CRCT1Q9UGL9 99 aa3.12□□□□□ -1.91
CNOT9-207ENST00000489687 MT1HP80294 61 aa3.1□□□□□ -1.91
CNOT9-207ENST00000489687 K7ERS5 55 aa3.09□□□□□ -1.91
CNOT9-207ENST00000489687 COX6B2Q6YFQ2 88 aa3.09□□□□□ -1.91
CNOT9-207ENST00000489687 H0YAA0 97 aa3.06□□□□□ -1.92
CNOT9-207ENST00000489687 RPL37P61927 97 aaKnown RBP3.06□□□□□ -1.92
CNOT9-207ENST00000489687 M0R2T5 61 aa3.04□□□□□ -1.92
CNOT9-207ENST00000489687 KRTAP10-6P60371 365 aaPredicted RBP3.04□□□□□ -1.92
CNOT9-207ENST00000489687 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
CNOT9-207ENST00000489687 SSPOA2VEC9 5147 aa3.04□□□□□ -1.92
CNOT9-207ENST00000489687 USH2AO75445 5202 aa3.04□□□□□ -1.92
CNOT9-207ENST00000489687 A0A1B0GU33 70 aa3.02□□□□□ -1.93
CNOT9-207ENST00000489687 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
CNOT9-207ENST00000489687 H1FX-AS1Q4G0G2 97 aa3.01□□□□□ -1.93
CNOT9-207ENST00000489687 LUZP6Q538Z0 58 aa3□□□□□ -1.93
CNOT9-207ENST00000489687 SPINT4Q6UDR6 99 aa2.98□□□□□ -1.93
CNOT9-207ENST00000489687 FCGBPQ9Y6R7 5405 aaPredicted RBP2.94□□□□□ -1.94
CNOT9-207ENST00000489687 CAMK2N1Q7Z7J9 78 aa2.92□□□□□ -1.94
CNOT9-207ENST00000489687 SYNE2Q8WXH0 6885 aaKnown RBP2.9□□□□□ -1.94
CNOT9-207ENST00000489687 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.95
CNOT9-207ENST00000489687 KRTAP9-8Q9BYQ0 159 aa2.9□□□□□ -1.95
CNOT9-207ENST00000489687 MT2AP02795 61 aa2.89□□□□□ -1.95
CNOT9-207ENST00000489687 LCE1AQ5T7P2 110 aa2.89□□□□□ -1.95
CNOT9-207ENST00000489687 CRIPTQ9P021 101 aa2.89□□□□□ -1.95
CNOT9-207ENST00000489687 MT1FP04733 61 aa2.88□□□□□ -1.95
CNOT9-207ENST00000489687 KRTAP10-10P60014 251 aa2.83□□□□□ -1.96
CNOT9-207ENST00000489687 PLAC4Q8WY50 150 aa2.79□□□□□ -1.96
CNOT9-207ENST00000489687 NEBP20929 6669 aa2.76□□□□□ -1.97
CNOT9-207ENST00000489687 PRO2289Q9P1D8 64 aa2.76□□□□□ -1.97
CNOT9-207ENST00000489687 S4R3F8 94 aa2.76□□□□□ -1.97
CNOT9-207ENST00000489687 MUC12Q9UKN1 5478 aa2.76□□□□□ -1.97
CNOT9-207ENST00000489687 C10orf95Q9H7T3 257 aa2.74□□□□□ -1.97
CNOT9-207ENST00000489687 PP632Q6XCG6 107 aa2.73□□□□□ -1.97
CNOT9-207ENST00000489687 KRTAP13-4Q3LI77 160 aa2.72□□□□□ -1.97
CNOT9-207ENST00000489687 M0QZ58 72 aa2.71□□□□□ -1.98
CNOT9-207ENST00000489687 KRTAP19-6Q3LI70 58 aa2.71□□□□□ -1.98
CNOT9-207ENST00000489687 KRTAP12-1P59990 96 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 177.6 ms