RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 KIAA1109Q2LD37 5005 aa5.58□□□□□ -1.52
NOD1-208ENST00000489614 BIRC6Q9NR09 4857 aa5.56□□□□□ -1.52
NOD1-208ENST00000489614 HERC2O95714 4834 aa5.54□□□□□ -1.52
NOD1-208ENST00000489614 ANAPC11Q9NYG5 84 aa5.54□□□□□ -1.52
NOD1-208ENST00000489614 DMBT1Q9UGM3 2413 aaPredicted RBP5.54□□□□□ -1.52
NOD1-208ENST00000489614 KRTAP13-3Q3SY46 172 aa5.54□□□□□ -1.52
NOD1-208ENST00000489614 C20orf166-AS1Q96NR2 134 aa5.54□□□□□ -1.52
NOD1-208ENST00000489614 H0YAA0 97 aa5.52□□□□□ -1.53
NOD1-208ENST00000489614 LRP1Q07954 4544 aaKnown RBP5.52□□□□□ -1.53
NOD1-208ENST00000489614 IGKV2D-30A0A075B6S6 120 aa5.49□□□□□ -1.53
NOD1-208ENST00000489614 IGKV2-30P06310 120 aa5.49□□□□□ -1.53
NOD1-208ENST00000489614 Q5VSD8 79 aa5.47□□□□□ -1.53
NOD1-208ENST00000489614 Q8N1X5 172 aa5.47□□□□□ -1.53
NOD1-208ENST00000489614 RPS29P62273 56 aaKnown RBP5.46□□□□□ -1.54
NOD1-208ENST00000489614 ABCA13Q86UQ4 5058 aa5.45□□□□□ -1.54
NOD1-208ENST00000489614 KRTAP10-8P60410 259 aa5.44□□□□□ -1.54
NOD1-208ENST00000489614 MYCBP2O75592 4640 aa5.44□□□□□ -1.54
NOD1-208ENST00000489614 A0A1B0GU33 70 aa5.4□□□□□ -1.54
NOD1-208ENST00000489614 TYMSOSQ8TAI1 123 aa5.4□□□□□ -1.54
NOD1-208ENST00000489614 MT1HL1P0DM35 61 aa5.4□□□□□ -1.55
NOD1-208ENST00000489614 K7ERS5 55 aa5.38□□□□□ -1.55
NOD1-208ENST00000489614 KRTAP4-5Q9BYR2 181 aa5.38□□□□□ -1.55
NOD1-208ENST00000489614 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
NOD1-208ENST00000489614 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
NOD1-208ENST00000489614 LUZP6Q538Z0 58 aa5.37□□□□□ -1.55
NOD1-208ENST00000489614 TPRXLQ17RH7 258 aa5.36□□□□□ -1.55
NOD1-208ENST00000489614 H1FX-AS1Q4G0G2 97 aa5.31□□□□□ -1.56
NOD1-208ENST00000489614 LCE2BO14633 110 aa5.28□□□□□ -1.56
NOD1-208ENST00000489614 PCLOQ9Y6V0 5065 aa5.28□□□□□ -1.56
NOD1-208ENST00000489614 MUC17Q685J3 4493 aa5.26□□□□□ -1.57
NOD1-208ENST00000489614 A0A0D9SG42 100 aa5.24□□□□□ -1.57
NOD1-208ENST00000489614 LCE2CQ5TA81 110 aa5.24□□□□□ -1.57
NOD1-208ENST00000489614 COX6B2Q6YFQ2 88 aa5.21□□□□□ -1.58
NOD1-208ENST00000489614 RPL37P61927 97 aaKnown RBP5.16□□□□□ -1.58
NOD1-208ENST00000489614 LPAP08519 4548 aa5.16□□□□□ -1.58
NOD1-208ENST00000489614 HERC1Q15751 4861 aa5.16□□□□□ -1.58
NOD1-208ENST00000489614 HMCN2Q8NDA2 5059 aa5.1□□□□□ -1.59
NOD1-208ENST00000489614 LCE2AQ5TA79 106 aaPredicted RBP5.09□□□□□ -1.6
NOD1-208ENST00000489614 XP32Q5T750 250 aa5.08□□□□□ -1.6
NOD1-208ENST00000489614 KRTAP3-1Q9BYR8 98 aa5.08□□□□□ -1.6
NOD1-208ENST00000489614 LRP2P98164 4655 aa5.07□□□□□ -1.6
NOD1-208ENST00000489614 KRTAP13-4Q3LI77 160 aa5.06□□□□□ -1.6
NOD1-208ENST00000489614 C9orf92A6NGG3 77 aa5.04□□□□□ -1.6
NOD1-208ENST00000489614 SEC61BP60468 96 aaKnown RBP5.01□□□□□ -1.61
NOD1-208ENST00000489614 S4R3F8 94 aa4.98□□□□□ -1.61
NOD1-208ENST00000489614 RNF213Q63HN8 5207 aa4.96□□□□□ -1.62
NOD1-208ENST00000489614 KRTAP12-2P59991 146 aa4.95□□□□□ -1.62
NOD1-208ENST00000489614 KRTAP10-6P60371 365 aaPredicted RBP4.95□□□□□ -1.62
NOD1-208ENST00000489614 UBR4Q5T4S7 5183 aa4.95□□□□□ -1.62
NOD1-208ENST00000489614 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
NOD1-208ENST00000489614 MUC2Q02817 5179 aa4.9□□□□□ -1.63
NOD1-208ENST00000489614 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
NOD1-208ENST00000489614 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
NOD1-208ENST00000489614 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
NOD1-208ENST00000489614 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
NOD1-208ENST00000489614 LORP23490 312 aaPredicted RBP4.74□□□□□ -1.65
NOD1-208ENST00000489614 FAT4Q6V0I7 4981 aa4.66□□□□□ -1.66
NOD1-208ENST00000489614 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
NOD1-208ENST00000489614 M0QZ58 72 aa4.54□□□□□ -1.68
NOD1-208ENST00000489614 M0R2T5 61 aa4.53□□□□□ -1.68
NOD1-208ENST00000489614 MT1HP80294 61 aa4.53□□□□□ -1.68
NOD1-208ENST00000489614 PRO2289Q9P1D8 64 aa4.52□□□□□ -1.69
NOD1-208ENST00000489614 FSIP2Q5CZC0 6907 aa4.49□□□□□ -1.69
NOD1-208ENST00000489614 R4GN34 69 aa4.47□□□□□ -1.69
NOD1-208ENST00000489614 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.7
NOD1-208ENST00000489614 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
NOD1-208ENST00000489614 MT2AP02795 61 aa4.34□□□□□ -1.71
NOD1-208ENST00000489614 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
NOD1-208ENST00000489614 MT1FP04733 61 aa4.32□□□□□ -1.72
NOD1-208ENST00000489614 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
NOD1-208ENST00000489614 SPRR2GQ9BYE4 73 aa4.27□□□□□ -1.73
NOD1-208ENST00000489614 INE1O15225 51 aa4.27□□□□□ -1.73
NOD1-208ENST00000489614 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
NOD1-208ENST00000489614 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
NOD1-208ENST00000489614 USH2AO75445 5202 aa4.2□□□□□ -1.74
NOD1-208ENST00000489614 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
NOD1-208ENST00000489614 KRTAP10-10P60014 251 aa4.18□□□□□ -1.74
NOD1-208ENST00000489614 TNP1P09430 55 aa4.15□□□□□ -1.75
NOD1-208ENST00000489614 MT1BP07438 61 aa4.12□□□□□ -1.75
NOD1-208ENST00000489614 SSPOA2VEC9 5147 aa4□□□□□ -1.77
NOD1-208ENST00000489614 KRTAP10-5P60370 271 aa3.97□□□□□ -1.77
NOD1-208ENST00000489614 MT1XP80297 61 aa3.97□□□□□ -1.77
NOD1-208ENST00000489614 KRTAP9-2Q9BYQ4 174 aa3.97□□□□□ -1.77
NOD1-208ENST00000489614 LCE3AQ5TA76 89 aa3.9□□□□□ -1.78
NOD1-208ENST00000489614 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
NOD1-208ENST00000489614 KRTAP10-12P60413 245 aa3.8□□□□□ -1.8
NOD1-208ENST00000489614 CRCT1Q9UGL9 99 aa3.77□□□□□ -1.81
NOD1-208ENST00000489614 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
NOD1-208ENST00000489614 KMT2DO14686 5537 aa3.76□□□□□ -1.81
NOD1-208ENST00000489614 FCGBPQ9Y6R7 5405 aaPredicted RBP3.74□□□□□ -1.81
NOD1-208ENST00000489614 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
NOD1-208ENST00000489614 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
NOD1-208ENST00000489614 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
NOD1-208ENST00000489614 MACF1Q9UPN3 7388 aaKnown RBP3.7□□□□□ -1.82
NOD1-208ENST00000489614 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
NOD1-208ENST00000489614 KRTAP12-3P60328 96 aa3.66□□□□□ -1.82
NOD1-208ENST00000489614 KRTAP4-8A0A0G2JLE6 195 aa3.59□□□□□ -1.83
NOD1-208ENST00000489614 KRTAP4-8Q9BYQ9 185 aa3.59□□□□□ -1.83
NOD1-208ENST00000489614 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
NOD1-208ENST00000489614 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms