RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 VPS13BQ7Z7G8 4022 aa3.74□□□□□ -1.81
PDCD4-209ENST00000489049 KRTAP13-3Q3SY46 172 aa3.73□□□□□ -1.81
PDCD4-209ENST00000489049 NOTCH2NLQ7Z3S9 236 aa3.73□□□□□ -1.81
PDCD4-209ENST00000489049 KRTAP16-1A8MUX0 517 aa3.72□□□□□ -1.81
PDCD4-209ENST00000489049 SMR3BP02814 79 aaPredicted RBP3.72□□□□□ -1.81
PDCD4-209ENST00000489049 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
PDCD4-209ENST00000489049 KRTAP10-12P60413 245 aa3.71□□□□□ -1.82
PDCD4-209ENST00000489049 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
PDCD4-209ENST00000489049 PKHD1P08F94 4074 aa3.71□□□□□ -1.82
PDCD4-209ENST00000489049 OXTP01178 125 aa3.7□□□□□ -1.82
PDCD4-209ENST00000489049 Q1T7F1 81 aa3.69□□□□□ -1.82
PDCD4-209ENST00000489049 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
PDCD4-209ENST00000489049 FP248Q71RG6 208 aaPredicted RBP3.69□□□□□ -1.82
PDCD4-209ENST00000489049 ACYP2P14621 99 aa3.68□□□□□ -1.82
PDCD4-209ENST00000489049 KRTAP10-8P60410 259 aa3.68□□□□□ -1.82
PDCD4-209ENST00000489049 Q5W150 140 aa3.68□□□□□ -1.82
PDCD4-209ENST00000489049 C20orf166-AS1Q96NR2 134 aa3.67□□□□□ -1.82
PDCD4-209ENST00000489049 A8MUU9 505 aa3.66□□□□□ -1.82
PDCD4-209ENST00000489049 PCOTHQ58A44 107 aa3.66□□□□□ -1.82
PDCD4-209ENST00000489049 Q5VSD8 79 aa3.66□□□□□ -1.82
PDCD4-209ENST00000489049 APOBP04114 4563 aaKnown RBP3.66□□□□□ -1.82
PDCD4-209ENST00000489049 A8MUN3 132 aa3.65□□□□□ -1.83
PDCD4-209ENST00000489049 KRTAP5-9P26371 169 aa3.65□□□□□ -1.83
PDCD4-209ENST00000489049 COA5Q86WW8 74 aa3.65□□□□□ -1.83
PDCD4-209ENST00000489049 C7orf65Q6ZTY9 151 aa3.64□□□□□ -1.83
PDCD4-209ENST00000489049 DMAC1Q96GE9 116 aa3.64□□□□□ -1.83
PDCD4-209ENST00000489049 PKHD1L1Q86WI1 4243 aa3.64□□□□□ -1.83
PDCD4-209ENST00000489049 PRR4Q16378 134 aa3.63□□□□□ -1.83
PDCD4-209ENST00000489049 HRES1P13985 223 aa3.62□□□□□ -1.83
PDCD4-209ENST00000489049 C4orf26Q17RF5 130 aa3.62□□□□□ -1.83
PDCD4-209ENST00000489049 CRCT1Q9UGL9 99 aa3.62□□□□□ -1.83
PDCD4-209ENST00000489049 FSIP2Q5CZC0 6907 aa3.61□□□□□ -1.83
PDCD4-209ENST00000489049 FAT4Q6V0I7 4981 aa3.61□□□□□ -1.83
PDCD4-209ENST00000489049 FLG2Q5D862 2391 aaPredicted RBP3.61□□□□□ -1.83
PDCD4-209ENST00000489049 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
PDCD4-209ENST00000489049 CHKB-CPT1BH3BT56 60 aa3.59□□□□□ -1.83
PDCD4-209ENST00000489049 SPTSSBQ8NFR3 76 aa3.59□□□□□ -1.83
PDCD4-209ENST00000489049 FAT1Q14517 4588 aa3.58□□□□□ -1.84
PDCD4-209ENST00000489049 LINC01558Q9Y6Z2 57 aa3.58□□□□□ -1.84
PDCD4-209ENST00000489049 RNF213Q63HN8 5207 aa3.57□□□□□ -1.84
PDCD4-209ENST00000489049 PRR15LQ9BU68 103 aa3.57□□□□□ -1.84
PDCD4-209ENST00000489049 PRO0628Q9UI54 55 aa3.57□□□□□ -1.84
PDCD4-209ENST00000489049 ATP11AUNQ6ZP68 121 aa3.56□□□□□ -1.84
PDCD4-209ENST00000489049 RETNLBQ9BQ08 111 aa3.56□□□□□ -1.84
PDCD4-209ENST00000489049 C9orf92A6NGG3 77 aa3.55□□□□□ -1.84
PDCD4-209ENST00000489049 DMBT1Q9UGM3 2413 aaPredicted RBP3.55□□□□□ -1.84
PDCD4-209ENST00000489049 SPINK7P58062 85 aa3.54□□□□□ -1.84
PDCD4-209ENST00000489049 HSPG2P98160 4391 aa3.54□□□□□ -1.84
PDCD4-209ENST00000489049 MT1HL1P0DM35 61 aa3.53□□□□□ -1.84
PDCD4-209ENST00000489049 RPL37P61927 97 aaKnown RBP3.53□□□□□ -1.84
PDCD4-209ENST00000489049 PSPHP1O15172 72 aa3.52□□□□□ -1.85
PDCD4-209ENST00000489049 TPRXLQ17RH7 258 aa3.51□□□□□ -1.85
PDCD4-209ENST00000489049 Q5VV11 94 aa3.51□□□□□ -1.85
PDCD4-209ENST00000489049 COX6B2Q6YFQ2 88 aa3.5□□□□□ -1.85
PDCD4-209ENST00000489049 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
PDCD4-209ENST00000489049 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
PDCD4-209ENST00000489049 TNXBP22105 4242 aa3.49□□□□□ -1.85
PDCD4-209ENST00000489049 A0A1B0GU69 56 aa3.48□□□□□ -1.85
PDCD4-209ENST00000489049 SEC61GP60059 68 aa3.48□□□□□ -1.85
PDCD4-209ENST00000489049 A6NED7 52 aa3.47□□□□□ -1.85
PDCD4-209ENST00000489049 FAT3Q8TDW7 4589 aa3.47□□□□□ -1.85
PDCD4-209ENST00000489049 CDC42SE1Q9NRR8 79 aa3.45□□□□□ -1.86
PDCD4-209ENST00000489049 UQCR11O14957 56 aa3.43□□□□□ -1.86
PDCD4-209ENST00000489049 LRP1Q07954 4544 aaKnown RBP3.42□□□□□ -1.86
PDCD4-209ENST00000489049 HMCN2Q8NDA2 5059 aa3.41□□□□□ -1.86
PDCD4-209ENST00000489049 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
PDCD4-209ENST00000489049 SPATA8Q6RVD6 105 aa3.4□□□□□ -1.87
PDCD4-209ENST00000489049 RBM12B-AS1Q9P1G2 102 aa3.4□□□□□ -1.87
PDCD4-209ENST00000489049 H1FX-AS1Q4G0G2 97 aa3.39□□□□□ -1.87
PDCD4-209ENST00000489049 LCA10Q71F78 164 aa3.38□□□□□ -1.87
PDCD4-209ENST00000489049 MIR22HGQ0VDD5 57 aa3.37□□□□□ -1.87
PDCD4-209ENST00000489049 MYCBP2O75592 4640 aa3.37□□□□□ -1.87
PDCD4-209ENST00000489049 S4R3F8 94 aa3.36□□□□□ -1.87
PDCD4-209ENST00000489049 PMAIP1Q13794 54 aa3.35□□□□□ -1.87
PDCD4-209ENST00000489049 A0A1B0GU33 70 aa3.33□□□□□ -1.88
PDCD4-209ENST00000489049 CSAG1Q6PB30 78 aa3.32□□□□□ -1.88
PDCD4-209ENST00000489049 KRTAP4-3Q9BYR4 195 aa3.3□□□□□ -1.88
PDCD4-209ENST00000489049 A6NN06 94 aa3.29□□□□□ -1.88
PDCD4-209ENST00000489049 H0YAA0 97 aa3.29□□□□□ -1.88
PDCD4-209ENST00000489049 K7ERS5 55 aa3.28□□□□□ -1.88
PDCD4-209ENST00000489049 A8MU10 97 aa3.26□□□□□ -1.89
PDCD4-209ENST00000489049 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
PDCD4-209ENST00000489049 M0QZ58 72 aa3.25□□□□□ -1.89
PDCD4-209ENST00000489049 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
PDCD4-209ENST00000489049 LRP2P98164 4655 aa3.22□□□□□ -1.89
PDCD4-209ENST00000489049 NEBP20929 6669 aa3.21□□□□□ -1.9
PDCD4-209ENST00000489049 ADM2Q7Z4H4 148 aa3.2□□□□□ -1.9
PDCD4-209ENST00000489049 SSPOA2VEC9 5147 aa3.2□□□□□ -1.9
PDCD4-209ENST00000489049 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
PDCD4-209ENST00000489049 LCE3AQ5TA76 89 aa3.18□□□□□ -1.9
PDCD4-209ENST00000489049 P0C880 135 aa3.16□□□□□ -1.9
PDCD4-209ENST00000489049 MUC17Q685J3 4493 aa3.16□□□□□ -1.9
PDCD4-209ENST00000489049 CRIPTQ9P021 101 aa3.15□□□□□ -1.91
PDCD4-209ENST00000489049 SYNE2Q8WXH0 6885 aaKnown RBP3.15□□□□□ -1.91
PDCD4-209ENST00000489049 KRTAP19-2Q3LHN2 52 aa3.14□□□□□ -1.91
PDCD4-209ENST00000489049 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
PDCD4-209ENST00000489049 KRTAP4-1Q9BYQ7 146 aa3.14□□□□□ -1.91
PDCD4-209ENST00000489049 KRTAP13-4Q3LI77 160 aa3.11□□□□□ -1.91
PDCD4-209ENST00000489049 R4GN34 69 aa3.11□□□□□ -1.91
PDCD4-209ENST00000489049 LPAP08519 4548 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms