RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 KRTAP10-10P60014 251 aa7.57□□□□□ -1.2
HDAC7-224ENST00000488927 MT1FP04733 61 aa7.55□□□□□ -1.2
HDAC7-224ENST00000488927 C20orf197Q8N268 126 aa7.55□□□□□ -1.2
HDAC7-224ENST00000488927 DMAC1Q96GE9 116 aa7.55□□□□□ -1.2
HDAC7-224ENST00000488927 NDUFC1O43677 76 aa7.54□□□□□ -1.2
HDAC7-224ENST00000488927 SNURFQ9Y675 71 aa7.54□□□□□ -1.2
HDAC7-224ENST00000488927 COX7CP15954 63 aa7.51□□□□□ -1.21
HDAC7-224ENST00000488927 ACYP2P14621 99 aa7.46□□□□□ -1.22
HDAC7-224ENST00000488927 SPANXA2-OT1Q8N9U9 137 aa7.46□□□□□ -1.22
HDAC7-224ENST00000488927 KRTAP9-3Q9BYQ3 159 aa7.44□□□□□ -1.22
HDAC7-224ENST00000488927 ANAPC13Q9BS18 74 aa7.43□□□□□ -1.22
HDAC7-224ENST00000488927 H0YAA0 97 aa7.38□□□□□ -1.23
HDAC7-224ENST00000488927 FSIP2Q5CZC0 6907 aa7.35□□□□□ -1.23
HDAC7-224ENST00000488927 SPTSSBQ8NFR3 76 aa7.34□□□□□ -1.23
HDAC7-224ENST00000488927 KRTAP9-6A0A140TA67 174 aa7.33□□□□□ -1.24
HDAC7-224ENST00000488927 CHKB-CPT1BH3BT56 60 aa7.33□□□□□ -1.24
HDAC7-224ENST00000488927 H7BZZ5 65 aa7.3□□□□□ -1.24
HDAC7-224ENST00000488927 CRIPTQ9P021 101 aa7.3□□□□□ -1.24
HDAC7-224ENST00000488927 CRCT1Q9UGL9 99 aa7.29□□□□□ -1.24
HDAC7-224ENST00000488927 USH2AO75445 5202 aa7.29□□□□□ -1.24
HDAC7-224ENST00000488927 ADM2Q7Z4H4 148 aa7.27□□□□□ -1.25
HDAC7-224ENST00000488927 CYSTM1Q9H1C7 97 aa7.26□□□□□ -1.25
HDAC7-224ENST00000488927 CCDC179H3BU77 68 aa7.22□□□□□ -1.25
HDAC7-224ENST00000488927 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
HDAC7-224ENST00000488927 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.26
HDAC7-224ENST00000488927 COA5Q86WW8 74 aa7.19□□□□□ -1.26
HDAC7-224ENST00000488927 SSPOA2VEC9 5147 aa7.14□□□□□ -1.27
HDAC7-224ENST00000488927 ATP5EP56381 51 aaPredicted RBP7.13□□□□□ -1.27
HDAC7-224ENST00000488927 P0C880 135 aa7.12□□□□□ -1.27
HDAC7-224ENST00000488927 KRTAP19-8Q3LI54 63 aa7.1□□□□□ -1.27
HDAC7-224ENST00000488927 Q5VV11 94 aa7.1□□□□□ -1.27
HDAC7-224ENST00000488927 R4GN34 69 aa7.09□□□□□ -1.27
HDAC7-224ENST00000488927 TMEM258P61165 79 aa7.04□□□□□ -1.28
HDAC7-224ENST00000488927 M0QZ58 72 aa7.03□□□□□ -1.28
HDAC7-224ENST00000488927 KRTAP19-6Q3LI70 58 aa7.03□□□□□ -1.28
HDAC7-224ENST00000488927 MT1BP07438 61 aa7.02□□□□□ -1.29
HDAC7-224ENST00000488927 SEC61GP60059 68 aa7□□□□□ -1.29
HDAC7-224ENST00000488927 SERP1Q9Y6X1 66 aa6.97□□□□□ -1.29
HDAC7-224ENST00000488927 FCGBPQ9Y6R7 5405 aaPredicted RBP6.94□□□□□ -1.3
HDAC7-224ENST00000488927 PLAC4Q8WY50 150 aa6.9□□□□□ -1.3
HDAC7-224ENST00000488927 H3BS24 57 aa6.89□□□□□ -1.31
HDAC7-224ENST00000488927 LINC01554Q52M75 96 aa6.89□□□□□ -1.31
HDAC7-224ENST00000488927 A6NN06 94 aa6.86□□□□□ -1.31
HDAC7-224ENST00000488927 A0A1B0GU69 56 aa6.85□□□□□ -1.31
HDAC7-224ENST00000488927 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
HDAC7-224ENST00000488927 A0A1B0GU33 70 aa6.8□□□□□ -1.32
HDAC7-224ENST00000488927 PCP4P48539 62 aa6.79□□□□□ -1.32
HDAC7-224ENST00000488927 PRR15LQ9BU68 103 aa6.79□□□□□ -1.32
HDAC7-224ENST00000488927 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.33
HDAC7-224ENST00000488927 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.33
HDAC7-224ENST00000488927 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.75□□□□□ -1.33
HDAC7-224ENST00000488927 LINC01558Q9Y6Z2 57 aa6.75□□□□□ -1.33
HDAC7-224ENST00000488927 MACF1Q9UPN3 7388 aaKnown RBP6.73□□□□□ -1.33
HDAC7-224ENST00000488927 MT1XP80297 61 aa6.68□□□□□ -1.34
HDAC7-224ENST00000488927 SPATA8Q6RVD6 105 aa6.68□□□□□ -1.34
HDAC7-224ENST00000488927 SMIM26A0A096LP01 95 aa6.64□□□□□ -1.35
HDAC7-224ENST00000488927 A0A0D9SG42 100 aa6.64□□□□□ -1.35
HDAC7-224ENST00000488927 V9GYY9 64 aa6.63□□□□□ -1.35
HDAC7-224ENST00000488927 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.35
HDAC7-224ENST00000488927 CAMK2N1Q7Z7J9 78 aa6.58□□□□□ -1.36
HDAC7-224ENST00000488927 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
HDAC7-224ENST00000488927 Q1T7F1 81 aa6.56□□□□□ -1.36
HDAC7-224ENST00000488927 UQCR11O14957 56 aa6.55□□□□□ -1.36
HDAC7-224ENST00000488927 RPS28P62857 69 aaKnown RBP6.55□□□□□ -1.36
HDAC7-224ENST00000488927 SPINT4Q6UDR6 99 aa6.54□□□□□ -1.36
HDAC7-224ENST00000488927 KRTAP12-1P59990 96 aa6.51□□□□□ -1.37
HDAC7-224ENST00000488927 KRTAP12-2P59991 146 aa6.5□□□□□ -1.37
HDAC7-224ENST00000488927 A8MU10 97 aa6.49□□□□□ -1.37
HDAC7-224ENST00000488927 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
HDAC7-224ENST00000488927 PSPHP1O15172 72 aa6.45□□□□□ -1.38
HDAC7-224ENST00000488927 MIR22HGQ0VDD5 57 aa6.41□□□□□ -1.38
HDAC7-224ENST00000488927 SVIPQ8NHG7 77 aa6.39□□□□□ -1.39
HDAC7-224ENST00000488927 KRTAP10-12P60413 245 aa6.37□□□□□ -1.39
HDAC7-224ENST00000488927 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
HDAC7-224ENST00000488927 KMT2DO14686 5537 aa6.32□□□□□ -1.4
HDAC7-224ENST00000488927 KRTAP5-9P26371 169 aa6.31□□□□□ -1.4
HDAC7-224ENST00000488927 A6NED7 52 aa6.3□□□□□ -1.4
HDAC7-224ENST00000488927 KRTAP8-1Q8IUC2 63 aa6.3□□□□□ -1.4
HDAC7-224ENST00000488927 K7ERS5 55 aa6.28□□□□□ -1.4
HDAC7-224ENST00000488927 KRTAP4-8A0A0G2JLE6 195 aa6.24□□□□□ -1.41
HDAC7-224ENST00000488927 KRTAP4-8Q9BYQ9 185 aa6.24□□□□□ -1.41
HDAC7-224ENST00000488927 MUC12Q9UKN1 5478 aa6.2□□□□□ -1.42
HDAC7-224ENST00000488927 SPRR2FQ96RM1 72 aa6.19□□□□□ -1.42
HDAC7-224ENST00000488927 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
HDAC7-224ENST00000488927 NEBP20929 6669 aa6.17□□□□□ -1.42
HDAC7-224ENST00000488927 TNP1P09430 55 aa6.17□□□□□ -1.42
HDAC7-224ENST00000488927 MDN1Q9NU22 5596 aa6.12□□□□□ -1.43
HDAC7-224ENST00000488927 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
HDAC7-224ENST00000488927 SPRR2EP22531 72 aa6.02□□□□□ -1.45
HDAC7-224ENST00000488927 SPRR2BP35325 72 aa6.02□□□□□ -1.45
HDAC7-224ENST00000488927 SPRR2AP35326 72 aa6.02□□□□□ -1.45
HDAC7-224ENST00000488927 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
HDAC7-224ENST00000488927 LCE1AQ5T7P2 110 aa5.97□□□□□ -1.45
HDAC7-224ENST00000488927 KRTAP19-7Q3SYF9 63 aa5.96□□□□□ -1.46
HDAC7-224ENST00000488927 LCE3AQ5TA76 89 aa5.95□□□□□ -1.46
HDAC7-224ENST00000488927 MT1EP04732 61 aa5.91□□□□□ -1.46
HDAC7-224ENST00000488927 KRTAP19-5Q3LI72 72 aa5.91□□□□□ -1.46
HDAC7-224ENST00000488927 ROMO1P60602 79 aa5.87□□□□□ -1.47
HDAC7-224ENST00000488927 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
HDAC7-224ENST00000488927 SPRR2DP22532 72 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms