RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 KLKP1Q107X0 134 aa5.32□□□□□ -1.56
CCHCR1-215ENST00000488920 LOC101927531A0A1B0GV80 90 aa5.31□□□□□ -1.56
CCHCR1-215ENST00000488920 FAM240AA0A1B0GVK7 77 aa5.31□□□□□ -1.56
CCHCR1-215ENST00000488920 ACYP1P07311 99 aa5.3□□□□□ -1.56
CCHCR1-215ENST00000488920 HIST1H4AP62805 103 aaKnown RBP5.29□□□□□ -1.56
CCHCR1-215ENST00000488920 UQCRQO14949 82 aa5.26□□□□□ -1.57
CCHCR1-215ENST00000488920 ATP5EP2Q5VTU8 51 aa5.26□□□□□ -1.57
CCHCR1-215ENST00000488920 H0Y9P7 68 aa5.25□□□□□ -1.57
CCHCR1-215ENST00000488920 KRTAP10-5P60370 271 aa5.25□□□□□ -1.57
CCHCR1-215ENST00000488920 ATOX1O00244 68 aa5.23□□□□□ -1.57
CCHCR1-215ENST00000488920 NDUFC1O43677 76 aa5.23□□□□□ -1.57
CCHCR1-215ENST00000488920 MT-ATP8P03928 68 aa5.23□□□□□ -1.57
CCHCR1-215ENST00000488920 IMUPQ9GZP8 106 aa5.23□□□□□ -1.57
CCHCR1-215ENST00000488920 CRIPTQ9P021 101 aa5.23□□□□□ -1.57
CCHCR1-215ENST00000488920 NEBP20929 6669 aa5.23□□□□□ -1.57
CCHCR1-215ENST00000488920 LINC00643Q86TS7 51 aa5.21□□□□□ -1.58
CCHCR1-215ENST00000488920 SCGB1A1P11684 91 aa5.2□□□□□ -1.58
CCHCR1-215ENST00000488920 MUC12Q9UKN1 5478 aa5.2□□□□□ -1.58
CCHCR1-215ENST00000488920 LINC00208Q96KT6 92 aa5.17□□□□□ -1.58
CCHCR1-215ENST00000488920 H0YAA0 97 aa5.16□□□□□ -1.58
CCHCR1-215ENST00000488920 PCP4P48539 62 aa5.16□□□□□ -1.58
CCHCR1-215ENST00000488920 ADM2Q7Z4H4 148 aa5.16□□□□□ -1.58
CCHCR1-215ENST00000488920 A8MUN3 132 aa5.15□□□□□ -1.59
CCHCR1-215ENST00000488920 MP68P56378 58 aa5.11□□□□□ -1.59
CCHCR1-215ENST00000488920 OCR1Q9BZK8 76 aa5.11□□□□□ -1.59
CCHCR1-215ENST00000488920 KMT2DO14686 5537 aa5.09□□□□□ -1.59
CCHCR1-215ENST00000488920 MDN1Q9NU22 5596 aa5.09□□□□□ -1.6
CCHCR1-215ENST00000488920 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
CCHCR1-215ENST00000488920 KRTAP20-1Q3LI63 56 aa5.08□□□□□ -1.6
CCHCR1-215ENST00000488920 ANAPC13Q9BS18 74 aa5.04□□□□□ -1.6
CCHCR1-215ENST00000488920 P0C880 135 aa5.03□□□□□ -1.6
CCHCR1-215ENST00000488920 MT1XP80297 61 aa5.02□□□□□ -1.61
CCHCR1-215ENST00000488920 PLAC4Q8WY50 150 aa5.02□□□□□ -1.61
CCHCR1-215ENST00000488920 PRO2289Q9P1D8 64 aa5.02□□□□□ -1.61
CCHCR1-215ENST00000488920 H3BPC8 53 aa5.01□□□□□ -1.61
CCHCR1-215ENST00000488920 R4GN34 69 aa5.01□□□□□ -1.61
CCHCR1-215ENST00000488920 DMAC1Q96GE9 116 aa4.99□□□□□ -1.61
CCHCR1-215ENST00000488920 C20orf197Q8N268 126 aa4.98□□□□□ -1.61
CCHCR1-215ENST00000488920 M0QZ58 72 aa4.97□□□□□ -1.61
CCHCR1-215ENST00000488920 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
CCHCR1-215ENST00000488920 COX7CP15954 63 aa4.94□□□□□ -1.62
CCHCR1-215ENST00000488920 SMIM20Q8N5G0 67 aa4.94□□□□□ -1.62
CCHCR1-215ENST00000488920 SERP2Q8N6R1 65 aa4.94□□□□□ -1.62
CCHCR1-215ENST00000488920 CCDC179H3BU77 68 aa4.93□□□□□ -1.62
CCHCR1-215ENST00000488920 LINC01554Q52M75 96 aa4.93□□□□□ -1.62
CCHCR1-215ENST00000488920 TRAV7A0A075B6U4 112 aa4.91□□□□□ -1.62
CCHCR1-215ENST00000488920 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.63
CCHCR1-215ENST00000488920 SPRR2EP22531 72 aa4.89□□□□□ -1.63
CCHCR1-215ENST00000488920 SPRR2BP35325 72 aa4.89□□□□□ -1.63
CCHCR1-215ENST00000488920 SPRR2AP35326 72 aa4.89□□□□□ -1.63
CCHCR1-215ENST00000488920 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
CCHCR1-215ENST00000488920 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
CCHCR1-215ENST00000488920 ACYP2P14621 99 aa4.87□□□□□ -1.63
CCHCR1-215ENST00000488920 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
CCHCR1-215ENST00000488920 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
CCHCR1-215ENST00000488920 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
CCHCR1-215ENST00000488920 LCE1AQ5T7P2 110 aa4.82□□□□□ -1.64
CCHCR1-215ENST00000488920 SPTSSBQ8NFR3 76 aa4.82□□□□□ -1.64
CCHCR1-215ENST00000488920 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
CCHCR1-215ENST00000488920 CHKB-CPT1BH3BT56 60 aa4.79□□□□□ -1.64
CCHCR1-215ENST00000488920 CYSTM1Q9H1C7 97 aa4.79□□□□□ -1.64
CCHCR1-215ENST00000488920 SNURFQ9Y675 71 aa4.78□□□□□ -1.64
CCHCR1-215ENST00000488920 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
CCHCR1-215ENST00000488920 TMEM258P61165 79 aa4.75□□□□□ -1.65
CCHCR1-215ENST00000488920 H7BZZ5 65 aa4.74□□□□□ -1.65
CCHCR1-215ENST00000488920 SPRR2DP22532 72 aa4.73□□□□□ -1.65
CCHCR1-215ENST00000488920 KRTAP2-2Q9BYT5 123 aa4.71□□□□□ -1.66
CCHCR1-215ENST00000488920 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
CCHCR1-215ENST00000488920 ATP5EP56381 51 aaPredicted RBP4.67□□□□□ -1.66
CCHCR1-215ENST00000488920 SPANXA2-OT1Q8N9U9 137 aa4.67□□□□□ -1.66
CCHCR1-215ENST00000488920 KRTAP13-4Q3LI77 160 aa4.66□□□□□ -1.66
CCHCR1-215ENST00000488920 RPS28P62857 69 aaKnown RBP4.64□□□□□ -1.67
CCHCR1-215ENST00000488920 CAMK2N1Q7Z7J9 78 aa4.61□□□□□ -1.67
CCHCR1-215ENST00000488920 SERP1Q9Y6X1 66 aa4.61□□□□□ -1.67
CCHCR1-215ENST00000488920 LCE3BQ5TA77 95 aa4.6□□□□□ -1.67
CCHCR1-215ENST00000488920 COA5Q86WW8 74 aa4.57□□□□□ -1.68
CCHCR1-215ENST00000488920 A0A0D9SG42 100 aa4.53□□□□□ -1.68
CCHCR1-215ENST00000488920 SEC61GP60059 68 aa4.52□□□□□ -1.69
CCHCR1-215ENST00000488920 SMIM26A0A096LP01 95 aa4.5□□□□□ -1.69
CCHCR1-215ENST00000488920 SPATA8Q6RVD6 105 aa4.5□□□□□ -1.69
CCHCR1-215ENST00000488920 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
CCHCR1-215ENST00000488920 A0A1B0GU33 70 aa4.46□□□□□ -1.7
CCHCR1-215ENST00000488920 SPINT4Q6UDR6 99 aa4.46□□□□□ -1.7
CCHCR1-215ENST00000488920 MT1EP04732 61 aa4.45□□□□□ -1.7
CCHCR1-215ENST00000488920 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
CCHCR1-215ENST00000488920 KRTAP19-3Q7Z4W3 81 aa4.42□□□□□ -1.7
CCHCR1-215ENST00000488920 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
CCHCR1-215ENST00000488920 DSTQ03001 7570 aaKnown RBP4.42□□□□□ -1.7
CCHCR1-215ENST00000488920 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
CCHCR1-215ENST00000488920 Q1T7F1 81 aa4.4□□□□□ -1.71
CCHCR1-215ENST00000488920 V9GYY9 64 aa4.39□□□□□ -1.71
CCHCR1-215ENST00000488920 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
CCHCR1-215ENST00000488920 A0A1B0GU69 56 aa4.34□□□□□ -1.71
CCHCR1-215ENST00000488920 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
CCHCR1-215ENST00000488920 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
CCHCR1-215ENST00000488920 A8MU10 97 aa4.32□□□□□ -1.72
CCHCR1-215ENST00000488920 MT1GP13640 62 aa4.31□□□□□ -1.72
CCHCR1-215ENST00000488920 PSPHP1O15172 72 aa4.29□□□□□ -1.72
CCHCR1-215ENST00000488920 PRR15LQ9BU68 103 aa4.28□□□□□ -1.72
CCHCR1-215ENST00000488920 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms