RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 MYO9AB2RTY4 2548 aa1.08□□□□□ -2.24
SSR1-209ENST00000488834 HRNRQ86YZ3 2850 aaPredicted RBP1.08□□□□□ -2.24
SSR1-209ENST00000488834 DCHS2Q6V1P9 2916 aa1.08□□□□□ -2.24
SSR1-209ENST00000488834 ACANP16112 2415 aa1.07□□□□□ -2.24
SSR1-209ENST00000488834 CFAP46Q8IYW2 2715 aa1.07□□□□□ -2.24
SSR1-209ENST00000488834 CEP295Q9C0D2 2601 aa1.07□□□□□ -2.24
SSR1-209ENST00000488834 NBEAL1Q6ZS30 2694 aa1.07□□□□□ -2.24
SSR1-209ENST00000488834 HYDINQ4G0P3 5121 aa1.07□□□□□ -2.24
SSR1-209ENST00000488834 ABCA13Q86UQ4 5058 aa1.06□□□□□ -2.24
SSR1-209ENST00000488834 USP9YO00507 2555 aaPredicted RBP1.06□□□□□ -2.24
SSR1-209ENST00000488834 XIRP2A4UGR9 3374 aa1.06□□□□□ -2.24
SSR1-209ENST00000488834 PDZD2O15018 2839 aa1.06□□□□□ -2.24
SSR1-209ENST00000488834 RYR2Q92736 4967 aa1.06□□□□□ -2.24
SSR1-209ENST00000488834 ZFHX4Q86UP3 3567 aa1.06□□□□□ -2.24
SSR1-209ENST00000488834 GCN1Q92616 2671 aaKnown RBP1.05□□□□□ -2.24
SSR1-209ENST00000488834 DNAH14Q0VDD8 3507 aa1.05□□□□□ -2.24
SSR1-209ENST00000488834 FREM2Q5SZK8 3169 aa1.05□□□□□ -2.24
SSR1-209ENST00000488834 RPS29P62273 56 aaKnown RBP1.05□□□□□ -2.24
SSR1-209ENST00000488834 AKAP9Q99996 3911 aa1.05□□□□□ -2.24
SSR1-209ENST00000488834 ATMQ13315 3056 aa1.05□□□□□ -2.24
SSR1-209ENST00000488834 USP34Q70CQ2 3546 aa1.05□□□□□ -2.24
SSR1-209ENST00000488834 TGP01266 2768 aa1.05□□□□□ -2.24
SSR1-209ENST00000488834 DCHS1Q96JQ0 3298 aa1.05□□□□□ -2.24
SSR1-209ENST00000488834 TENM4Q6N022 2769 aa1.04□□□□□ -2.24
SSR1-209ENST00000488834 POLQO75417 2590 aa1.04□□□□□ -2.24
SSR1-209ENST00000488834 SPEGQ15772 3267 aa1.04□□□□□ -2.24
SSR1-209ENST00000488834 MACF1Q9UPN3 7388 aaKnown RBP1.04□□□□□ -2.24
SSR1-209ENST00000488834 CSMD1Q96PZ7 3565 aa1.03□□□□□ -2.24
SSR1-209ENST00000488834 KMT2CQ8NEZ4 4911 aaKnown RBP1.03□□□□□ -2.24
SSR1-209ENST00000488834 NBEAL2Q6ZNJ1 2754 aa1.02□□□□□ -2.25
SSR1-209ENST00000488834 EPPK1P58107 5090 aaKnown RBP1.02□□□□□ -2.25
SSR1-209ENST00000488834 NIPBLQ6KC79 2804 aaeCLIP1.02□□□□□ -2.25
SSR1-209ENST00000488834 CELSR3Q9NYQ7 3312 aa1.02□□□□□ -2.25
SSR1-209ENST00000488834 NBPF19A0A087WUL8 3843 aa1.02□□□□□ -2.25
SSR1-209ENST00000488834 MXRA5Q9NR99 2828 aa1.02□□□□□ -2.25
SSR1-209ENST00000488834 ZNF292O60281 2723 aa1.02□□□□□ -2.25
SSR1-209ENST00000488834 ITPR2Q14571 2701 aa1.02□□□□□ -2.25
SSR1-209ENST00000488834 HERC1Q15751 4861 aa1.01□□□□□ -2.25
SSR1-209ENST00000488834 DNAH11Q96DT5 4516 aa1.01□□□□□ -2.25
SSR1-209ENST00000488834 KRTAP10-4P60372 401 aaPredicted RBP1.01□□□□□ -2.25
SSR1-209ENST00000488834 ACACBO00763 2458 aa1.01□□□□□ -2.25
SSR1-209ENST00000488834 COL7A1Q02388 2944 aa1.01□□□□□ -2.25
SSR1-209ENST00000488834 WDFY3Q8IZQ1 3526 aa1.01□□□□□ -2.25
SSR1-209ENST00000488834 ATRQ13535 2644 aa1.01□□□□□ -2.25
SSR1-209ENST00000488834 SMR3AQ99954 134 aa1□□□□□ -2.25
SSR1-209ENST00000488834 LAMA5O15230 3695 aa1□□□□□ -2.25
SSR1-209ENST00000488834 VCANP13611 3396 aa1□□□□□ -2.25
SSR1-209ENST00000488834 LOC400499M0QZD8 3231 aa0.99□□□□□ -2.25
SSR1-209ENST00000488834 SYNE2Q8WXH0 6885 aaKnown RBP0.99□□□□□ -2.25
SSR1-209ENST00000488834 EYSQ5T1H1 3165 aa0.99□□□□□ -2.25
SSR1-209ENST00000488834 STAB2Q8WWQ8 2551 aa0.99□□□□□ -2.25
SSR1-209ENST00000488834 HIVEP1P15822 2718 aa0.99□□□□□ -2.25
SSR1-209ENST00000488834 NSD1Q96L73 2696 aaPredicted RBP0.99□□□□□ -2.25
SSR1-209ENST00000488834 DNAH1Q9P2D7 4330 aa0.98□□□□□ -2.25
SSR1-209ENST00000488834 ZANQ9Y493 2812 aa0.98□□□□□ -2.25
SSR1-209ENST00000488834 TNP1P09430 55 aa0.98□□□□□ -2.25
SSR1-209ENST00000488834 FLNCQ14315 2725 aa0.98□□□□□ -2.25
SSR1-209ENST00000488834 IGSF10Q6WRI0 2623 aa0.98□□□□□ -2.25
SSR1-209ENST00000488834 SPENQ96T58 3664 aaKnown RBP0.97□□□□□ -2.25
SSR1-209ENST00000488834 DNAH8Q96JB1 4490 aa0.97□□□□□ -2.25
SSR1-209ENST00000488834 CDH23Q9H251 3354 aa0.97□□□□□ -2.25
SSR1-209ENST00000488834 PKD1L1Q8TDX9 2849 aa0.97□□□□□ -2.25
SSR1-209ENST00000488834 NEBP20929 6669 aa0.97□□□□□ -2.25
SSR1-209ENST00000488834 TENM3Q9P273 2699 aa0.97□□□□□ -2.25
SSR1-209ENST00000488834 LAMA3Q16787 3333 aa0.97□□□□□ -2.25
SSR1-209ENST00000488834 ADGRG4Q8IZF6 3080 aa0.97□□□□□ -2.25
SSR1-209ENST00000488834 RELNP78509 3460 aa0.96□□□□□ -2.25
SSR1-209ENST00000488834 C9orf92A6NGG3 77 aa0.96□□□□□ -2.26
SSR1-209ENST00000488834 AHNAKQ09666 5890 aaKnown RBP0.96□□□□□ -2.26
SSR1-209ENST00000488834 CMYA5Q8N3K9 4069 aa0.96□□□□□ -2.26
SSR1-209ENST00000488834 DNAH2Q9P225 4427 aa0.96□□□□□ -2.26
SSR1-209ENST00000488834 FBN2P35556 2912 aa0.95□□□□□ -2.26
SSR1-209ENST00000488834 AHNAK2Q8IVF2 5795 aa0.95□□□□□ -2.26
SSR1-209ENST00000488834 FRAS1Q86XX4 4008 aa0.95□□□□□ -2.26
SSR1-209ENST00000488834 HUWE1Q7Z6Z7 4374 aaKnown RBP0.95□□□□□ -2.26
SSR1-209ENST00000488834 DNAH10Q8IVF4 4471 aa0.95□□□□□ -2.26
SSR1-209ENST00000488834 ASPMQ8IZT6 3477 aa0.95□□□□□ -2.26
SSR1-209ENST00000488834 DYNC2H1Q8NCM8 4307 aaKnown RBP0.95□□□□□ -2.26
SSR1-209ENST00000488834 BSNQ9UPA5 3926 aa0.95□□□□□ -2.26
SSR1-209ENST00000488834 SACSQ9NZJ4 4579 aa0.95□□□□□ -2.26
SSR1-209ENST00000488834 FLNAP21333 2647 aaKnown RBP0.95□□□□□ -2.26
SSR1-209ENST00000488834 SMG1Q96Q15 3661 aaKnown RBP0.95□□□□□ -2.26
SSR1-209ENST00000488834 FSIP2Q5CZC0 6907 aa0.94□□□□□ -2.26
SSR1-209ENST00000488834 FAT4Q6V0I7 4981 aa0.94□□□□□ -2.26
SSR1-209ENST00000488834 DNAH17Q9UFH2 4485 aa0.94□□□□□ -2.26
SSR1-209ENST00000488834 LYSTQ99698 3801 aa0.94□□□□□ -2.26
SSR1-209ENST00000488834 DNAH3Q8TD57 4116 aa0.94□□□□□ -2.26
SSR1-209ENST00000488834 ANK3Q12955 4377 aaKnown RBP0.94□□□□□ -2.26
SSR1-209ENST00000488834 DNAH9Q9NYC9 4486 aa0.93□□□□□ -2.26
SSR1-209ENST00000488834 TRRAPQ9Y4A5 3859 aa0.93□□□□□ -2.26
SSR1-209ENST00000488834 MYCBP2O75592 4640 aa0.93□□□□□ -2.26
SSR1-209ENST00000488834 DNAH6Q9C0G6 4158 aa0.93□□□□□ -2.26
SSR1-209ENST00000488834 BRCA2P51587 3418 aa0.92□□□□□ -2.26
SSR1-209ENST00000488834 MGAM2Q2M2H8 2515 aa0.91□□□□□ -2.26
SSR1-209ENST00000488834 PRKDCP78527 4128 aaKnown RBP0.91□□□□□ -2.26
SSR1-209ENST00000488834 MYO15AQ9UKN7 3530 aa0.91□□□□□ -2.26
SSR1-209ENST00000488834 HECTD4Q9Y4D8 3996 aa0.9□□□□□ -2.26
SSR1-209ENST00000488834 HERC2O95714 4834 aa0.9□□□□□ -2.26
SSR1-209ENST00000488834 PKD1P98161 4303 aa0.9□□□□□ -2.27
SSR1-209ENST00000488834 FLGP20930 4061 aaPredicted RBP0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms