RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 KRTAP9-2Q9BYQ4 174 aa3.36□□□□□ -1.87
SIK3-212ENST00000488337 PRKDCP78527 4128 aaKnown RBP3.35□□□□□ -1.87
SIK3-212ENST00000488337 DNAH3Q8TD57 4116 aa3.35□□□□□ -1.87
SIK3-212ENST00000488337 KRTAP13-2Q52LG2 175 aa3.34□□□□□ -1.87
SIK3-212ENST00000488337 CMYA5Q8N3K9 4069 aa3.34□□□□□ -1.88
SIK3-212ENST00000488337 KRTAP3-1Q9BYR8 98 aa3.33□□□□□ -1.88
SIK3-212ENST00000488337 DYNC2H1Q8NCM8 4307 aaKnown RBP3.33□□□□□ -1.88
SIK3-212ENST00000488337 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
SIK3-212ENST00000488337 M0R2T5 61 aa3.33□□□□□ -1.88
SIK3-212ENST00000488337 KRTAP13-4Q3LI77 160 aa3.32□□□□□ -1.88
SIK3-212ENST00000488337 KRTAP10-6P60371 365 aaPredicted RBP3.3□□□□□ -1.88
SIK3-212ENST00000488337 KRTAP17-1Q9BYP8 105 aa3.29□□□□□ -1.88
SIK3-212ENST00000488337 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
SIK3-212ENST00000488337 HECTD4Q9Y4D8 3996 aa3.29□□□□□ -1.88
SIK3-212ENST00000488337 MYCBP2O75592 4640 aa3.28□□□□□ -1.88
SIK3-212ENST00000488337 KRTAP4-8A0A0G2JLE6 195 aa3.27□□□□□ -1.89
SIK3-212ENST00000488337 KRTAP1-4P0C5Y4 121 aa3.27□□□□□ -1.89
SIK3-212ENST00000488337 PLECQ15149 4684 aaKnown RBP3.26□□□□□ -1.89
SIK3-212ENST00000488337 DNAH11Q96DT5 4516 aa3.26□□□□□ -1.89
SIK3-212ENST00000488337 PLAC4Q8WY50 150 aa3.24□□□□□ -1.89
SIK3-212ENST00000488337 S4R3F8 94 aa3.24□□□□□ -1.89
SIK3-212ENST00000488337 DNAH2Q9P225 4427 aa3.23□□□□□ -1.89
SIK3-212ENST00000488337 KRTAP12-2P59991 146 aa3.23□□□□□ -1.89
SIK3-212ENST00000488337 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
SIK3-212ENST00000488337 RPS29P62273 56 aaKnown RBP3.2□□□□□ -1.9
SIK3-212ENST00000488337 KRTAP4-7Q9BYR0 210 aa3.19□□□□□ -1.9
SIK3-212ENST00000488337 DNHD1Q96M86 4753 aa3.19□□□□□ -1.9
SIK3-212ENST00000488337 KRTAP12-1P59990 96 aa3.18□□□□□ -1.9
SIK3-212ENST00000488337 KRTAP10-8P60410 259 aa3.18□□□□□ -1.9
SIK3-212ENST00000488337 STARD9Q9P2P6 4700 aa3.17□□□□□ -1.9
SIK3-212ENST00000488337 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
SIK3-212ENST00000488337 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
SIK3-212ENST00000488337 R4GN34 69 aa3.17□□□□□ -1.9
SIK3-212ENST00000488337 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
SIK3-212ENST00000488337 LRP1BQ9NZR2 4599 aa3.13□□□□□ -1.91
SIK3-212ENST00000488337 M0QZ58 72 aa3.12□□□□□ -1.91
SIK3-212ENST00000488337 A0A1B0GVY2 172 aa3.11□□□□□ -1.91
SIK3-212ENST00000488337 FAT2Q9NYQ8 4349 aa3.07□□□□□ -1.92
SIK3-212ENST00000488337 PKHD1P08F94 4074 aa3.07□□□□□ -1.92
SIK3-212ENST00000488337 VPS13BQ7Z7G8 4022 aa3.06□□□□□ -1.92
SIK3-212ENST00000488337 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
SIK3-212ENST00000488337 INE1O15225 51 aa3.04□□□□□ -1.92
SIK3-212ENST00000488337 DNAH5Q8TE73 4624 aa3.04□□□□□ -1.92
SIK3-212ENST00000488337 PKHD1L1Q86WI1 4243 aa3.03□□□□□ -1.92
SIK3-212ENST00000488337 SACSQ9NZJ4 4579 aa3.02□□□□□ -1.93
SIK3-212ENST00000488337 APOBP04114 4563 aaKnown RBP3.01□□□□□ -1.93
SIK3-212ENST00000488337 LCE1DQ5T752 114 aa3.01□□□□□ -1.93
SIK3-212ENST00000488337 FAT1Q14517 4588 aa3□□□□□ -1.93
SIK3-212ENST00000488337 KRTAP19-4Q3LI73 84 aa2.98□□□□□ -1.93
SIK3-212ENST00000488337 PP632Q6XCG6 107 aa2.96□□□□□ -1.94
SIK3-212ENST00000488337 TNXBP22105 4242 aa2.96□□□□□ -1.94
SIK3-212ENST00000488337 KRTAP10-4P60372 401 aaPredicted RBP2.96□□□□□ -1.94
SIK3-212ENST00000488337 LRP1Q07954 4544 aaKnown RBP2.95□□□□□ -1.94
SIK3-212ENST00000488337 KRTAP4-9Q9BYQ8 210 aa2.95□□□□□ -1.94
SIK3-212ENST00000488337 PKD1P98161 4303 aa2.93□□□□□ -1.94
SIK3-212ENST00000488337 DYNC1H1Q14204 4646 aaKnown RBP2.92□□□□□ -1.94
SIK3-212ENST00000488337 TNP1P09430 55 aa2.92□□□□□ -1.94
SIK3-212ENST00000488337 HYDINQ4G0P3 5121 aa2.92□□□□□ -1.94
SIK3-212ENST00000488337 KRTAP4-5Q9BYR2 181 aa2.9□□□□□ -1.94
SIK3-212ENST00000488337 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
SIK3-212ENST00000488337 RYR2Q92736 4967 aa2.88□□□□□ -1.95
SIK3-212ENST00000488337 BIRC6Q9NR09 4857 aa2.86□□□□□ -1.95
SIK3-212ENST00000488337 HSPG2P98160 4391 aa2.85□□□□□ -1.95
SIK3-212ENST00000488337 KRTAP10-10P60014 251 aa2.85□□□□□ -1.95
SIK3-212ENST00000488337 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
SIK3-212ENST00000488337 MT1HL1P0DM35 61 aa2.81□□□□□ -1.96
SIK3-212ENST00000488337 KMT2CQ8NEZ4 4911 aaKnown RBP2.81□□□□□ -1.96
SIK3-212ENST00000488337 KRTAP9-7A8MTY7 169 aa2.79□□□□□ -1.96
SIK3-212ENST00000488337 FAT3Q8TDW7 4589 aa2.79□□□□□ -1.96
SIK3-212ENST00000488337 FLGP20930 4061 aaPredicted RBP2.78□□□□□ -1.96
SIK3-212ENST00000488337 KRTAP19-1Q8IUB9 90 aa2.77□□□□□ -1.97
SIK3-212ENST00000488337 KRTAP4-11Q9BYQ6 195 aa2.76□□□□□ -1.97
SIK3-212ENST00000488337 LRP2P98164 4655 aa2.75□□□□□ -1.97
SIK3-212ENST00000488337 RYR3Q15413 4870 aa2.75□□□□□ -1.97
SIK3-212ENST00000488337 LCE5AQ5TCM9 118 aa2.73□□□□□ -1.97
SIK3-212ENST00000488337 RYR1P21817 5038 aa2.73□□□□□ -1.97
SIK3-212ENST00000488337 EPPK1P58107 5090 aaKnown RBP2.71□□□□□ -1.98
SIK3-212ENST00000488337 KIAA1109Q2LD37 5005 aa2.71□□□□□ -1.98
SIK3-212ENST00000488337 LPAP08519 4548 aa2.7□□□□□ -1.98
SIK3-212ENST00000488337 LCE4AQ5TA78 99 aa2.69□□□□□ -1.98
SIK3-212ENST00000488337 KRTAP9-3Q9BYQ3 159 aa2.69□□□□□ -1.98
SIK3-212ENST00000488337 PCLOQ9Y6V0 5065 aa2.68□□□□□ -1.98
SIK3-212ENST00000488337 UBR4Q5T4S7 5183 aa2.68□□□□□ -1.98
SIK3-212ENST00000488337 KRTAP4-1Q9BYQ7 146 aa2.6□□□□□ -1.99
SIK3-212ENST00000488337 HERC2O95714 4834 aa2.6□□□□□ -1.99
SIK3-212ENST00000488337 MUC2Q02817 5179 aa2.57□□□□□ -2
SIK3-212ENST00000488337 KRTAP10-12P60413 245 aa2.55□□□□□ -2
SIK3-212ENST00000488337 ABCA13Q86UQ4 5058 aa2.55□□□□□ -2
SIK3-212ENST00000488337 MUC17Q685J3 4493 aa2.51□□□□□ -2.01
SIK3-212ENST00000488337 KRTAP19-2Q3LHN2 52 aa2.49□□□□□ -2.01
SIK3-212ENST00000488337 LCE1AQ5T7P2 110 aa2.49□□□□□ -2.01
SIK3-212ENST00000488337 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
SIK3-212ENST00000488337 KRTAP8-1Q8IUC2 63 aa2.47□□□□□ -2.01
SIK3-212ENST00000488337 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
SIK3-212ENST00000488337 HERC1Q15751 4861 aa2.46□□□□□ -2.02
SIK3-212ENST00000488337 FSIP2Q5CZC0 6907 aa2.45□□□□□ -2.02
SIK3-212ENST00000488337 SYNE1Q8NF91 8797 aaKnown RBP2.44□□□□□ -2.02
SIK3-212ENST00000488337 SPRR2GQ9BYE4 73 aa2.43□□□□□ -2.02
SIK3-212ENST00000488337 CRCT1Q9UGL9 99 aa2.43□□□□□ -2.02
SIK3-212ENST00000488337 MT1HP80294 61 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms