RNA–Protein interactions for RNA: ENST00000488032.1

PCGF3-212, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-212ENST00000488032 USP9YO00507 2555 aaPredicted RBP1.61□□□□□ -2.15
PCGF3-212ENST00000488032 TRRAPQ9Y4A5 3859 aa1.61□□□□□ -2.15
PCGF3-212ENST00000488032 DCHS2Q6V1P9 2916 aa1.61□□□□□ -2.15
PCGF3-212ENST00000488032 LAMA5O15230 3695 aa1.61□□□□□ -2.15
PCGF3-212ENST00000488032 DMXL2Q8TDJ6 3036 aa1.61□□□□□ -2.15
PCGF3-212ENST00000488032 MYO9AB2RTY4 2548 aa1.61□□□□□ -2.15
PCGF3-212ENST00000488032 DNAH10Q8IVF4 4471 aa1.6□□□□□ -2.15
PCGF3-212ENST00000488032 HUWE1Q7Z6Z7 4374 aaKnown RBP1.6□□□□□ -2.15
PCGF3-212ENST00000488032 LAMA3Q16787 3333 aa1.6□□□□□ -2.15
PCGF3-212ENST00000488032 NOTCH1P46531 2555 aa1.59□□□□□ -2.15
PCGF3-212ENST00000488032 SACSQ9NZJ4 4579 aa1.59□□□□□ -2.16
PCGF3-212ENST00000488032 CMYA5Q8N3K9 4069 aa1.59□□□□□ -2.16
PCGF3-212ENST00000488032 KRTAP8-1Q8IUC2 63 aa1.58□□□□□ -2.16
PCGF3-212ENST00000488032 TACC2O95359 2948 aa1.58□□□□□ -2.16
PCGF3-212ENST00000488032 DYNC2H1Q8NCM8 4307 aaKnown RBP1.58□□□□□ -2.16
PCGF3-212ENST00000488032 DNAH3Q8TD57 4116 aa1.58□□□□□ -2.16
PCGF3-212ENST00000488032 PRKDCP78527 4128 aaKnown RBP1.57□□□□□ -2.16
PCGF3-212ENST00000488032 ZFYVE26Q68DK2 2539 aa1.57□□□□□ -2.16
PCGF3-212ENST00000488032 POLQO75417 2590 aa1.56□□□□□ -2.16
PCGF3-212ENST00000488032 ANK2Q01484 3957 aa1.56□□□□□ -2.16
PCGF3-212ENST00000488032 TENM4Q6N022 2769 aa1.56□□□□□ -2.16
PCGF3-212ENST00000488032 FASNP49327 2511 aaKnown RBP1.56□□□□□ -2.16
PCGF3-212ENST00000488032 ASPMQ8IZT6 3477 aa1.55□□□□□ -2.16
PCGF3-212ENST00000488032 ANK3Q12955 4377 aaKnown RBP1.55□□□□□ -2.16
PCGF3-212ENST00000488032 MYO18BQ8IUG5 2567 aa1.55□□□□□ -2.16
PCGF3-212ENST00000488032 BDP1A6H8Y1 2624 aa1.55□□□□□ -2.16
PCGF3-212ENST00000488032 UNC79Q9P2D8 2635 aa1.55□□□□□ -2.16
PCGF3-212ENST00000488032 SMG1Q96Q15 3661 aaKnown RBP1.55□□□□□ -2.16
PCGF3-212ENST00000488032 DNAH9Q9NYC9 4486 aa1.54□□□□□ -2.16
PCGF3-212ENST00000488032 KRTAP2-3P0C7H8 128 aa1.54□□□□□ -2.16
PCGF3-212ENST00000488032 KRTAP2-4Q9BYR9 128 aa1.54□□□□□ -2.16
PCGF3-212ENST00000488032 KRTAP2-1Q9BYU5 128 aa1.54□□□□□ -2.16
PCGF3-212ENST00000488032 STAB2Q8WWQ8 2551 aa1.54□□□□□ -2.16
PCGF3-212ENST00000488032 DNAH6Q9C0G6 4158 aa1.54□□□□□ -2.16
PCGF3-212ENST00000488032 DNAH17Q9UFH2 4485 aa1.54□□□□□ -2.16
PCGF3-212ENST00000488032 DNAH7Q8WXX0 4024 aa1.53□□□□□ -2.16
PCGF3-212ENST00000488032 KRTAP6-3Q3LI67 103 aa1.53□□□□□ -2.16
PCGF3-212ENST00000488032 LYSTQ99698 3801 aa1.53□□□□□ -2.16
PCGF3-212ENST00000488032 CSMD3Q7Z407 3707 aa1.53□□□□□ -2.17
PCGF3-212ENST00000488032 GCN1Q92616 2671 aaKnown RBP1.53□□□□□ -2.17
PCGF3-212ENST00000488032 TEP1Q99973 2627 aaKnown RBP1.53□□□□□ -2.17
PCGF3-212ENST00000488032 BRCA2P51587 3418 aa1.52□□□□□ -2.17
PCGF3-212ENST00000488032 KRTAP21-3Q3LHN1 58 aa1.52□□□□□ -2.17
PCGF3-212ENST00000488032 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
PCGF3-212ENST00000488032 FLNCQ14315 2725 aa1.52□□□□□ -2.17
PCGF3-212ENST00000488032 PKD1P98161 4303 aa1.51□□□□□ -2.17
PCGF3-212ENST00000488032 VPS13BQ7Z7G8 4022 aa1.51□□□□□ -2.17
PCGF3-212ENST00000488032 HSPG2P98160 4391 aa1.51□□□□□ -2.17
PCGF3-212ENST00000488032 NBEAL1Q6ZS30 2694 aa1.51□□□□□ -2.17
PCGF3-212ENST00000488032 MUC3AQ02505 3323 aa1.5□□□□□ -2.17
PCGF3-212ENST00000488032 MYO15AQ9UKN7 3530 aa1.5□□□□□ -2.17
PCGF3-212ENST00000488032 KRTAP12-3P60328 96 aa1.5□□□□□ -2.17
PCGF3-212ENST00000488032 PDZD2O15018 2839 aa1.5□□□□□ -2.17
PCGF3-212ENST00000488032 KMT2AQ03164 3969 aa1.49□□□□□ -2.17
PCGF3-212ENST00000488032 HECTD4Q9Y4D8 3996 aa1.49□□□□□ -2.17
PCGF3-212ENST00000488032 FLGP20930 4061 aaPredicted RBP1.49□□□□□ -2.17
PCGF3-212ENST00000488032 APOBP04114 4563 aaKnown RBP1.49□□□□□ -2.17
PCGF3-212ENST00000488032 ATRQ13535 2644 aa1.48□□□□□ -2.17
PCGF3-212ENST00000488032 CEP295Q9C0D2 2601 aa1.48□□□□□ -2.17
PCGF3-212ENST00000488032 CDH23Q9H251 3354 aa1.48□□□□□ -2.17
PCGF3-212ENST00000488032 ANKRD11Q6UB99 2663 aaPredicted RBP1.48□□□□□ -2.17
PCGF3-212ENST00000488032 HRNRQ86YZ3 2850 aaPredicted RBP1.48□□□□□ -2.17
PCGF3-212ENST00000488032 ACACBO00763 2458 aa1.47□□□□□ -2.17
PCGF3-212ENST00000488032 KRTAP10-4P60372 401 aaPredicted RBP1.47□□□□□ -2.17
PCGF3-212ENST00000488032 ITPR2Q14571 2701 aa1.46□□□□□ -2.17
PCGF3-212ENST00000488032 DNAH5Q8TE73 4624 aa1.46□□□□□ -2.18
PCGF3-212ENST00000488032 FAT3Q8TDW7 4589 aa1.46□□□□□ -2.18
PCGF3-212ENST00000488032 ZNF469Q96JG9 3925 aaPredicted RBP1.45□□□□□ -2.18
PCGF3-212ENST00000488032 NBEAL2Q6ZNJ1 2754 aa1.45□□□□□ -2.18
PCGF3-212ENST00000488032 ADGRG4Q8IZF6 3080 aa1.45□□□□□ -2.18
PCGF3-212ENST00000488032 CSMD2Q7Z408 3487 aa1.45□□□□□ -2.18
PCGF3-212ENST00000488032 STAB1Q9NY15 2570 aa1.45□□□□□ -2.18
PCGF3-212ENST00000488032 PKHD1L1Q86WI1 4243 aa1.44□□□□□ -2.18
PCGF3-212ENST00000488032 ZANQ9Y493 2812 aa1.44□□□□□ -2.18
PCGF3-212ENST00000488032 HIVEP1P15822 2718 aa1.44□□□□□ -2.18
PCGF3-212ENST00000488032 CUBNO60494 3623 aa1.43□□□□□ -2.18
PCGF3-212ENST00000488032 MXRA5Q9NR99 2828 aa1.43□□□□□ -2.18
PCGF3-212ENST00000488032 EYSQ5T1H1 3165 aa1.43□□□□□ -2.18
PCGF3-212ENST00000488032 VPS13CQ709C8 3753 aa1.42□□□□□ -2.18
PCGF3-212ENST00000488032 FBN3Q75N90 2809 aa1.42□□□□□ -2.18
PCGF3-212ENST00000488032 FLNAP21333 2647 aaKnown RBP1.41□□□□□ -2.18
PCGF3-212ENST00000488032 PKD1L1Q8TDX9 2849 aa1.41□□□□□ -2.18
PCGF3-212ENST00000488032 MGAM2Q2M2H8 2515 aa1.39□□□□□ -2.19
PCGF3-212ENST00000488032 PLECQ15149 4684 aaKnown RBP1.39□□□□□ -2.19
PCGF3-212ENST00000488032 IGSF10Q6WRI0 2623 aa1.39□□□□□ -2.19
PCGF3-212ENST00000488032 SVEP1Q4LDE5 3571 aa1.39□□□□□ -2.19
PCGF3-212ENST00000488032 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
PCGF3-212ENST00000488032 NSD1Q96L73 2696 aaPredicted RBP1.38□□□□□ -2.19
PCGF3-212ENST00000488032 SMR3BP02814 79 aaPredicted RBP1.38□□□□□ -2.19
PCGF3-212ENST00000488032 FBN2P35556 2912 aa1.37□□□□□ -2.19
PCGF3-212ENST00000488032 FAT2Q9NYQ8 4349 aa1.37□□□□□ -2.19
PCGF3-212ENST00000488032 LRP1Q07954 4544 aaKnown RBP1.36□□□□□ -2.19
PCGF3-212ENST00000488032 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
PCGF3-212ENST00000488032 TENM3Q9P273 2699 aa1.36□□□□□ -2.19
PCGF3-212ENST00000488032 DYNC1H1Q14204 4646 aaKnown RBP1.34□□□□□ -2.19
PCGF3-212ENST00000488032 STARD9Q9P2P6 4700 aa1.32□□□□□ -2.2
PCGF3-212ENST00000488032 PRM1P04553 51 aa1.31□□□□□ -2.2
PCGF3-212ENST00000488032 SPRR2GQ9BYE4 73 aa1.31□□□□□ -2.2
PCGF3-212ENST00000488032 PKHD1P08F94 4074 aa1.29□□□□□ -2.2
PCGF3-212ENST00000488032 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms