RNA–Protein interactions for RNA: ENST00000487596.1

RAD50-207, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 3

Gene RAD50, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-207ENST00000487596 H3BUA1 57 aa-0.51□□□□□ -2.49
RAD50-207ENST00000487596 ITPR1Q14643 2758 aa-0.51□□□□□ -2.49
RAD50-207ENST00000487596 COL6A5A8TX70 2615 aa-0.52□□□□□ -2.49
RAD50-207ENST00000487596 SMIM5Q71RC9 77 aa-0.52□□□□□ -2.49
RAD50-207ENST00000487596 PREX2Q70Z35 1606 aa-0.53□□□□□ -2.49
RAD50-207ENST00000487596 KRTAP19-5Q3LI72 72 aa-0.53□□□□□ -2.49
RAD50-207ENST00000487596 LMO7Q8WWI1 1683 aa-0.53□□□□□ -2.49
RAD50-207ENST00000487596 EFCAB6Q5THR3 1501 aa-0.54□□□□□ -2.5
RAD50-207ENST00000487596 DNAH10Q8IVF4 4471 aa-0.54□□□□□ -2.5
RAD50-207ENST00000487596 ADGRG4Q8IZF6 3080 aa-0.54□□□□□ -2.5
RAD50-207ENST00000487596 SERF2P84101 59 aa-0.54□□□□□ -2.5
RAD50-207ENST00000487596 HERC2O95714 4834 aa-0.55□□□□□ -2.5
RAD50-207ENST00000487596 FAM208AQ9UK61 1670 aaKnown RBP-0.55□□□□□ -2.5
RAD50-207ENST00000487596 TMEM167BQ9NRX6 74 aa-0.56□□□□□ -2.5
RAD50-207ENST00000487596 DYNC1H1Q14204 4646 aaKnown RBP-0.56□□□□□ -2.5
RAD50-207ENST00000487596 SYCP2Q9BX26 1530 aa-0.57□□□□□ -2.5
RAD50-207ENST00000487596 MMP24-AS1A0A0U1RRL7 71 aa-0.57□□□□□ -2.5
RAD50-207ENST00000487596 NRXN3Q9Y4C0 1643 aa-0.57□□□□□ -2.5
RAD50-207ENST00000487596 CHD7Q9P2D1 2997 aa-0.57□□□□□ -2.5
RAD50-207ENST00000487596 RYR3Q15413 4870 aa-0.58□□□□□ -2.5
RAD50-207ENST00000487596 KAAG1Q9UBP8 84 aa-0.58□□□□□ -2.5
RAD50-207ENST00000487596 KIF21BO75037 1637 aa-0.58□□□□□ -2.5
RAD50-207ENST00000487596 DNAH17Q9UFH2 4485 aa-0.58□□□□□ -2.5
RAD50-207ENST00000487596 NOP10Q9NPE3 64 aaKnown RBP-0.59□□□□□ -2.5
RAD50-207ENST00000487596 RYR1P21817 5038 aa-0.59□□□□□ -2.5
RAD50-207ENST00000487596 MGAQ8IWI9 3026 aa-0.6□□□□□ -2.51
RAD50-207ENST00000487596 KRTAP20-2Q3LI61 65 aa-0.6□□□□□ -2.51
RAD50-207ENST00000487596 SRCAPQ6ZRS2 3230 aa-0.6□□□□□ -2.51
RAD50-207ENST00000487596 TNP1P09430 55 aa-0.61□□□□□ -2.51
RAD50-207ENST00000487596 EPPK1P58107 5090 aaKnown RBP-0.61□□□□□ -2.51
RAD50-207ENST00000487596 SPTAN1Q13813 2472 aaKnown RBP-0.61□□□□□ -2.51
RAD50-207ENST00000487596 DNHD1Q96M86 4753 aa-0.62□□□□□ -2.51
RAD50-207ENST00000487596 H0YGX0 51 aa-0.62□□□□□ -2.51
RAD50-207ENST00000487596 IQGAP1P46940 1657 aa-0.62□□□□□ -2.51
RAD50-207ENST00000487596 ADCY10Q96PN6 1610 aa-0.63□□□□□ -2.51
RAD50-207ENST00000487596 CSMD1Q96PZ7 3565 aa-0.63□□□□□ -2.51
RAD50-207ENST00000487596 LRBAP50851 2863 aa-0.64□□□□□ -2.51
RAD50-207ENST00000487596 SMR3BP02814 79 aaPredicted RBP-0.64□□□□□ -2.51
RAD50-207ENST00000487596 DDX60Q8IY21 1712 aaKnown RBP-0.64□□□□□ -2.51
RAD50-207ENST00000487596 SMIM27A0A1W2PRY6 76 aa-0.65□□□□□ -2.51
RAD50-207ENST00000487596 WFDC10BQ8IUB3 73 aa-0.65□□□□□ -2.51
RAD50-207ENST00000487596 KRTAP8-1Q8IUC2 63 aa-0.65□□□□□ -2.51
RAD50-207ENST00000487596 ABCA5Q8WWZ7 1642 aa-0.65□□□□□ -2.51
RAD50-207ENST00000487596 FANCD2Q9BXW9 1451 aa-0.66□□□□□ -2.51
RAD50-207ENST00000487596 M0QY20 66 aa-0.66□□□□□ -2.52
RAD50-207ENST00000487596 TFF3Q07654 80 aa-0.66□□□□□ -2.52
RAD50-207ENST00000487596 LAMA3Q16787 3333 aa-0.67□□□□□ -2.52
RAD50-207ENST00000487596 ABRACLQ9P1F3 81 aa-0.67□□□□□ -2.52
RAD50-207ENST00000487596 ABCC8Q09428 1581 aa-0.67□□□□□ -2.52
RAD50-207ENST00000487596 TRRAPQ9Y4A5 3859 aa-0.67□□□□□ -2.52
RAD50-207ENST00000487596 CRYBG3Q68DQ2 2970 aa-0.68□□□□□ -2.52
RAD50-207ENST00000487596 MT4P47944 62 aa-0.68□□□□□ -2.52
RAD50-207ENST00000487596 BIRC6Q9NR09 4857 aa-0.69□□□□□ -2.52
RAD50-207ENST00000487596 ZFHX4Q86UP3 3567 aa-0.69□□□□□ -2.52
RAD50-207ENST00000487596 PLNP26678 52 aa-0.69□□□□□ -2.52
RAD50-207ENST00000487596 RNF213Q63HN8 5207 aa-0.69□□□□□ -2.52
RAD50-207ENST00000487596 DOPEY1Q5JWR5 2465 aa-0.7□□□□□ -2.52
RAD50-207ENST00000487596 MT1HP80294 61 aa-0.7□□□□□ -2.52
RAD50-207ENST00000487596 NFAT5O94916 1531 aa-0.7□□□□□ -2.52
RAD50-207ENST00000487596 KIAA1109Q2LD37 5005 aa-0.7□□□□□ -2.52
RAD50-207ENST00000487596 NIPBLQ6KC79 2804 aaeCLIP-0.72□□□□□ -2.52
RAD50-207ENST00000487596 M0QZ58 72 aa-0.72□□□□□ -2.52
RAD50-207ENST00000487596 HYDINQ4G0P3 5121 aa-0.73□□□□□ -2.53
RAD50-207ENST00000487596 A8MTW9 85 aa-0.73□□□□□ -2.53
RAD50-207ENST00000487596 DEFB1P60022 68 aa-0.73□□□□□ -2.53
RAD50-207ENST00000487596 CLPSL2Q6UWE3 100 aa-0.73□□□□□ -2.53
RAD50-207ENST00000487596 MYO9AB2RTY4 2548 aa-0.74□□□□□ -2.53
RAD50-207ENST00000487596 LAMA2P24043 3122 aaKnown RBP-0.74□□□□□ -2.53
RAD50-207ENST00000487596 CFAP46Q8IYW2 2715 aa-0.74□□□□□ -2.53
RAD50-207ENST00000487596 CMC2Q9NRP2 79 aa-0.75□□□□□ -2.53
RAD50-207ENST00000487596 DNAH5Q8TE73 4624 aa-0.77□□□□□ -2.53
RAD50-207ENST00000487596 EYSQ5T1H1 3165 aa-0.78□□□□□ -2.53
RAD50-207ENST00000487596 LINC01546A6NGU7 62 aa-0.78□□□□□ -2.53
RAD50-207ENST00000487596 DMXL2Q8TDJ6 3036 aa-0.79□□□□□ -2.54
RAD50-207ENST00000487596 RYR2Q92736 4967 aa-0.81□□□□□ -2.54
RAD50-207ENST00000487596 SMIM2Q9BVW6 85 aa-0.82□□□□□ -2.54
RAD50-207ENST00000487596 DEFB131AP59861 70 aa-0.83□□□□□ -2.54
RAD50-207ENST00000487596 SMG1Q96Q15 3661 aaKnown RBP-0.83□□□□□ -2.54
RAD50-207ENST00000487596 CEP295Q9C0D2 2601 aa-0.85□□□□□ -2.55
RAD50-207ENST00000487596 CLTCL1P53675 1640 aa-0.86□□□□□ -2.55
RAD50-207ENST00000487596 POLR2KP53803 58 aaKnown RBP-0.86□□□□□ -2.55
RAD50-207ENST00000487596 ABCA13Q86UQ4 5058 aa-0.87□□□□□ -2.55
RAD50-207ENST00000487596 SNRPGP15A8MWD9 76 aa-0.87□□□□□ -2.55
RAD50-207ENST00000487596 MT1XP80297 61 aa-0.88□□□□□ -2.55
RAD50-207ENST00000487596 MT1EP04732 61 aa-0.89□□□□□ -2.55
RAD50-207ENST00000487596 PRUNE2Q8WUY3 3088 aa-0.9□□□□□ -2.55
RAD50-207ENST00000487596 TRPM2O94759 1503 aa-0.9□□□□□ -2.55
RAD50-207ENST00000487596 CFAP54Q96N23 3096 aa-0.9□□□□□ -2.55
RAD50-207ENST00000487596 SPART-AS1P0CW21 52 aa-0.91□□□□□ -2.56
RAD50-207ENST00000487596 VPS13CQ709C8 3753 aa-0.92□□□□□ -2.56
RAD50-207ENST00000487596 CSMD2Q7Z408 3487 aa-0.94□□□□□ -2.56
RAD50-207ENST00000487596 NDUFA1O15239 70 aa-0.95□□□□□ -2.56
RAD50-207ENST00000487596 MT1LQ93083 61 aa-0.95□□□□□ -2.56
RAD50-207ENST00000487596 TLN1Q9Y490 2541 aaKnown RBP-0.96□□□□□ -2.56
RAD50-207ENST00000487596 ITPR2Q14571 2701 aa-0.96□□□□□ -2.56
RAD50-207ENST00000487596 KRTAP20-1Q3LI63 56 aa-0.98□□□□□ -2.57
RAD50-207ENST00000487596 FRYLO94915 3013 aa-0.99□□□□□ -2.57
RAD50-207ENST00000487596 IQGAP2Q13576 1575 aa-1□□□□□ -2.57
RAD50-207ENST00000487596 ATMQ13315 3056 aa-1.02□□□□□ -2.57
RAD50-207ENST00000487596 LEAP2Q969E1 77 aa-1.05□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms