RNA–Protein interactions for RNA: ENST00000487596.1

RAD50-207, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 3

Gene RAD50, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-207ENST00000487596 AEBP2Q6ZN18 517 aaPredicted RBP29.07■■■□□ 2.24
RAD50-207ENST00000487596 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
RAD50-207ENST00000487596 SENP3Q9H4L4 574 aaPredicted RBP24.92■■□□□ 1.58
RAD50-207ENST00000487596 PHF23Q9BUL5 403 aaPredicted RBP24.56■■□□□ 1.52
RAD50-207ENST00000487596 FOXD1Q16676 465 aa23.06■■□□□ 1.28
RAD50-207ENST00000487596 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
RAD50-207ENST00000487596 PPP6R1Q9UPN7 881 aa21.76■■□□□ 1.07
RAD50-207ENST00000487596 ADRA2BP18089 450 aa21.72■■□□□ 1.07
RAD50-207ENST00000487596 POTEDQ86YR6 584 aa21.72■■□□□ 1.07
RAD50-207ENST00000487596 PIAS4Q8N2W9 510 aaPredicted RBP21.66■■□□□ 1.06
RAD50-207ENST00000487596 MSH5O43196 834 aa21.61■■□□□ 1.05
RAD50-207ENST00000487596 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
RAD50-207ENST00000487596 MAPK8IP2Q13387 824 aaPredicted RBP19.82■□□□□ 0.76
RAD50-207ENST00000487596 PPP4R3CPQ6ZMV5 832 aa19.79■□□□□ 0.76
RAD50-207ENST00000487596 DMRT2Q9Y5R5 561 aa19.78■□□□□ 0.76
RAD50-207ENST00000487596 CNKSR2Q8WXI2 1034 aa19.41■□□□□ 0.7
RAD50-207ENST00000487596 NCBP3Q53F19 620 aaKnown RBP19.25■□□□□ 0.67
RAD50-207ENST00000487596 HOXD11P31277 338 aaPredicted RBP19.19■□□□□ 0.66
RAD50-207ENST00000487596 RNF216Q9NWF9 866 aaPredicted RBP19.16■□□□□ 0.66
RAD50-207ENST00000487596 DCAF8L1A6NGE4 600 aa18.87■□□□□ 0.61
RAD50-207ENST00000487596 NPM3O75607 178 aaKnown RBP18.83■□□□□ 0.6
RAD50-207ENST00000487596 KCNA4P22459 653 aa18.72■□□□□ 0.59
RAD50-207ENST00000487596 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
RAD50-207ENST00000487596 RNF39Q9H2S5 420 aa18.4■□□□□ 0.54
RAD50-207ENST00000487596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.27■□□□□ 0.525e-9■■□□□ 11.6
RAD50-207ENST00000487596 CACNB1Q02641 598 aaPredicted RBP18.25■□□□□ 0.51
RAD50-207ENST00000487596 C1QBPQ07021 282 aaKnown RBP18.23■□□□□ 0.51
RAD50-207ENST00000487596 SLC4A2P04920 1241 aa17.87■□□□□ 0.45
RAD50-207ENST00000487596 U3KPZ7 1027 aaPredicted RBP17.87■□□□□ 0.45
RAD50-207ENST00000487596 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
RAD50-207ENST00000487596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
RAD50-207ENST00000487596 HNRNPUL2Q1KMD3 747 aaKnown RBP17.67■□□□□ 0.42
RAD50-207ENST00000487596 APLP2Q06481 763 aa17.62■□□□□ 0.41
RAD50-207ENST00000487596 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
RAD50-207ENST00000487596 CAPN15O75808 1086 aa17.49■□□□□ 0.39
RAD50-207ENST00000487596 MYCNP04198 464 aaPredicted RBP17.49■□□□□ 0.39
RAD50-207ENST00000487596 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
RAD50-207ENST00000487596 SPINK5Q9NQ38 1064 aaPredicted RBP17.46■□□□□ 0.39
RAD50-207ENST00000487596 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
RAD50-207ENST00000487596 DSG3P32926 999 aa17.32■□□□□ 0.36
RAD50-207ENST00000487596 TRHP20396 242 aaPredicted RBP17.25■□□□□ 0.35
RAD50-207ENST00000487596 ZBTB22O15209 634 aa17.17■□□□□ 0.34
RAD50-207ENST00000487596 ABCB7O75027 752 aa17.02■□□□□ 0.32
RAD50-207ENST00000487596 ATXN8OSP0DMR3 200 aa16.99■□□□□ 0.31
RAD50-207ENST00000487596 POLA2Q14181 598 aa16.89■□□□□ 0.29
RAD50-207ENST00000487596 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.29
RAD50-207ENST00000487596 ZBTB12Q9Y330 459 aaPredicted RBP16.74■□□□□ 0.27
RAD50-207ENST00000487596 CSRNP3Q8WYN3 585 aa16.73■□□□□ 0.27
RAD50-207ENST00000487596 POTEHQ6S545 545 aa16.69■□□□□ 0.26
RAD50-207ENST00000487596 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
RAD50-207ENST00000487596 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
RAD50-207ENST00000487596 FBLN2P98095 1184 aa16.41■□□□□ 0.22
RAD50-207ENST00000487596 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
RAD50-207ENST00000487596 AKT1S1Q96B36 256 aa16.29■□□□□ 0.2
RAD50-207ENST00000487596 SPDYE2BA6NHP3 402 aa16.19■□□□□ 0.18
RAD50-207ENST00000487596 SPDYE6P0CI01 402 aa16.19■□□□□ 0.18
RAD50-207ENST00000487596 SPDYE2Q495Y8 402 aa16.19■□□□□ 0.18
RAD50-207ENST00000487596 MKRN4PQ13434 485 aaPredicted RBP16.18■□□□□ 0.18
RAD50-207ENST00000487596 REM2Q8IYK8 340 aaPredicted RBP16.06■□□□□ 0.16
RAD50-207ENST00000487596 CHRDL2Q6WN34 429 aa16.04■□□□□ 0.16
RAD50-207ENST00000487596 ZNF692Q9BU19 519 aaPredicted RBP15.99■□□□□ 0.15
RAD50-207ENST00000487596 SSUH2Q9Y2M2 353 aa15.96■□□□□ 0.15
RAD50-207ENST00000487596 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
RAD50-207ENST00000487596 SPDYE1Q8NFV5 336 aaPredicted RBP15.83■□□□□ 0.12
RAD50-207ENST00000487596 PABPN1Q86U42 306 aaKnown RBP eCLIP15.74■□□□□ 0.11
RAD50-207ENST00000487596 FXR2P51116 673 aaKnown RBP eCLIP15.71■□□□□ 0.11
RAD50-207ENST00000487596 PIP4P2Q8N4L2 257 aa15.7■□□□□ 0.1
RAD50-207ENST00000487596 CLEC11AQ9Y240 323 aa15.67■□□□□ 0.1
RAD50-207ENST00000487596 SPDYE4A6NLX3 237 aa15.66■□□□□ 0.1
RAD50-207ENST00000487596 PRR29P0C7W0 189 aa15.53■□□□□ 0.08
RAD50-207ENST00000487596 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
RAD50-207ENST00000487596 PRKAR2AP13861 404 aaKnown RBP15.46■□□□□ 0.07
RAD50-207ENST00000487596 PROM2Q8N271 834 aa15.36■□□□□ 0.05
RAD50-207ENST00000487596 HAX1O00165 279 aa15.34■□□□□ 0.05
RAD50-207ENST00000487596 CHADLQ6NUI6 762 aa15.27■□□□□ 0.04
RAD50-207ENST00000487596 SP7Q8TDD2 431 aaPredicted RBP15.25■□□□□ 0.03
RAD50-207ENST00000487596 FARP1Q9Y4F1 1045 aaPredicted RBP15.2■□□□□ 0.02
RAD50-207ENST00000487596 C19orf67A6NJJ6 358 aa15.18■□□□□ 0.02
RAD50-207ENST00000487596 FKBP8Q14318 412 aa15.16■□□□□ 0.02
RAD50-207ENST00000487596 CREBZFQ9NS37 354 aa15.16■□□□□ 0.02
RAD50-207ENST00000487596 EVX2Q03828 476 aa15.06■□□□□ 0
RAD50-207ENST00000487596 NPM1P06748 294 aaKnown RBP eCLIP15.02■□□□□ -0
RAD50-207ENST00000487596 CD44P16070 742 aaKnown RBP15.01□□□□□ -0.01
RAD50-207ENST00000487596 PLEKHG5O94827 1062 aa14.99□□□□□ -0.01
RAD50-207ENST00000487596 CLCN6P51797 869 aa14.96□□□□□ -0.01
RAD50-207ENST00000487596 MNX1P50219 401 aaPredicted RBP14.94□□□□□ -0.02
RAD50-207ENST00000487596 FBXO3Q9UK99 471 aa14.91□□□□□ -0.02
RAD50-207ENST00000487596 MIER1Q8N108 512 aa14.9□□□□□ -0.02
RAD50-207ENST00000487596 PAK3O75914 559 aaPredicted RBP14.89□□□□□ -0.03
RAD50-207ENST00000487596 GABBR2O75899 941 aa14.84□□□□□ -0.03
RAD50-207ENST00000487596 ZRANB1Q9UGI0 708 aa14.84□□□□□ -0.03
RAD50-207ENST00000487596 PLCD3Q8N3E9 789 aa14.83□□□□□ -0.04
RAD50-207ENST00000487596 ZNF579Q8NAF0 562 aaKnown RBP14.83□□□□□ -0.04
RAD50-207ENST00000487596 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
RAD50-207ENST00000487596 TSPYL2Q9H2G4 693 aaPredicted RBP14.62□□□□□ -0.07
RAD50-207ENST00000487596 VASPP50552 380 aaPredicted RBP14.61□□□□□ -0.07
RAD50-207ENST00000487596 PHF12Q96QT6 1004 aa14.6□□□□□ -0.07
RAD50-207ENST00000487596 CCDC61Q9Y6R9 512 aa14.58□□□□□ -0.08
RAD50-207ENST00000487596 RASEFQ8IZ41 740 aa14.57□□□□□ -0.08
RAD50-207ENST00000487596 DCBLD2Q96PD2 775 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms