RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 KRTAP3-3Q9BYR6 98 aa9.9□□□□□ -0.82
HLA-F-228ENST00000486194 H0Y9P7 68 aa9.85□□□□□ -0.83
HLA-F-228ENST00000486194 KRTAP19-8Q3LI54 63 aa9.85□□□□□ -0.83
HLA-F-228ENST00000486194 SYNE2Q8WXH0 6885 aaKnown RBP9.84□□□□□ -0.83
HLA-F-228ENST00000486194 MT1BP07438 61 aa9.84□□□□□ -0.83
HLA-F-228ENST00000486194 A6NN06 94 aa9.82□□□□□ -0.84
HLA-F-228ENST00000486194 KRTAP6-3Q3LI67 103 aa9.82□□□□□ -0.84
HLA-F-228ENST00000486194 LINC00643Q86TS7 51 aa9.82□□□□□ -0.84
HLA-F-228ENST00000486194 CRIPTQ9P021 101 aa9.81□□□□□ -0.84
HLA-F-228ENST00000486194 A0A087WVE0 104 aa9.8□□□□□ -0.84
HLA-F-228ENST00000486194 IMUPQ9GZP8 106 aa9.79□□□□□ -0.84
HLA-F-228ENST00000486194 NDUFC1O43677 76 aa9.78□□□□□ -0.84
HLA-F-228ENST00000486194 A8MUN3 132 aa9.75□□□□□ -0.85
HLA-F-228ENST00000486194 H0YAA0 97 aa9.7□□□□□ -0.86
HLA-F-228ENST00000486194 LINC00208Q96KT6 92 aa9.69□□□□□ -0.86
HLA-F-228ENST00000486194 MP68P56378 58 aa9.67□□□□□ -0.86
HLA-F-228ENST00000486194 KRTAP10-5P60370 271 aa9.67□□□□□ -0.86
HLA-F-228ENST00000486194 OCR1Q9BZK8 76 aa9.63□□□□□ -0.87
HLA-F-228ENST00000486194 MT-ATP8P03928 68 aa9.55□□□□□ -0.88
HLA-F-228ENST00000486194 ADM2Q7Z4H4 148 aa9.55□□□□□ -0.88
HLA-F-228ENST00000486194 H3BPC8 53 aa9.54□□□□□ -0.88
HLA-F-228ENST00000486194 SCGB1A1P11684 91 aa9.46□□□□□ -0.9
HLA-F-228ENST00000486194 C20orf197Q8N268 126 aa9.41□□□□□ -0.9
HLA-F-228ENST00000486194 DMAC1Q96GE9 116 aa9.4□□□□□ -0.9
HLA-F-228ENST00000486194 PRO2289Q9P1D8 64 aa9.37□□□□□ -0.91
HLA-F-228ENST00000486194 R4GN34 69 aa9.36□□□□□ -0.91
HLA-F-228ENST00000486194 KRTAP5-9P26371 169 aa9.34□□□□□ -0.91
HLA-F-228ENST00000486194 PLAC4Q8WY50 150 aa9.34□□□□□ -0.91
HLA-F-228ENST00000486194 P0C880 135 aa9.29□□□□□ -0.92
HLA-F-228ENST00000486194 NEBP20929 6669 aa9.29□□□□□ -0.92
HLA-F-228ENST00000486194 M0QZ58 72 aa9.25□□□□□ -0.93
HLA-F-228ENST00000486194 TRAV7A0A075B6U4 112 aa9.24□□□□□ -0.93
HLA-F-228ENST00000486194 MUC12Q9UKN1 5478 aa9.23□□□□□ -0.93
HLA-F-228ENST00000486194 SMIM20Q8N5G0 67 aa9.23□□□□□ -0.93
HLA-F-228ENST00000486194 MT1XP80297 61 aa9.22□□□□□ -0.93
HLA-F-228ENST00000486194 ACYP2P14621 99 aa9.2□□□□□ -0.94
HLA-F-228ENST00000486194 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
HLA-F-228ENST00000486194 SPTSSBQ8NFR3 76 aa9.15□□□□□ -0.94
HLA-F-228ENST00000486194 KRTAP20-1Q3LI63 56 aa9.12□□□□□ -0.95
HLA-F-228ENST00000486194 LINC01554Q52M75 96 aa9.11□□□□□ -0.95
HLA-F-228ENST00000486194 SERP2Q8N6R1 65 aa9.1□□□□□ -0.95
HLA-F-228ENST00000486194 KMT2DO14686 5537 aa9.1□□□□□ -0.95
HLA-F-228ENST00000486194 KRTAP12-2P59991 146 aa9.06□□□□□ -0.96
HLA-F-228ENST00000486194 SPRR2FQ96RM1 72 aa9.05□□□□□ -0.96
HLA-F-228ENST00000486194 ANAPC13Q9BS18 74 aa9.04□□□□□ -0.96
HLA-F-228ENST00000486194 CHKB-CPT1BH3BT56 60 aa9.03□□□□□ -0.96
HLA-F-228ENST00000486194 KRTAP8-1Q8IUC2 63 aa9.02□□□□□ -0.97
HLA-F-228ENST00000486194 COX7CP15954 63 aa9.01□□□□□ -0.97
HLA-F-228ENST00000486194 MDN1Q9NU22 5596 aa8.98□□□□□ -0.97
HLA-F-228ENST00000486194 SNURFQ9Y675 71 aa8.94□□□□□ -0.98
HLA-F-228ENST00000486194 SPRR2EP22531 72 aa8.93□□□□□ -0.98
HLA-F-228ENST00000486194 SPRR2BP35325 72 aa8.93□□□□□ -0.98
HLA-F-228ENST00000486194 SPRR2AP35326 72 aa8.93□□□□□ -0.98
HLA-F-228ENST00000486194 SPANXA2-OT1Q8N9U9 137 aa8.89□□□□□ -0.99
HLA-F-228ENST00000486194 KRTAP2-3P0C7H8 128 aa8.88□□□□□ -0.99
HLA-F-228ENST00000486194 KRTAP2-4Q9BYR9 128 aa8.88□□□□□ -0.99
HLA-F-228ENST00000486194 CCDC179H3BU77 68 aa8.82□□□□□ -1
HLA-F-228ENST00000486194 KRTAP4-8A0A0G2JLE6 195 aa8.81□□□□□ -1
HLA-F-228ENST00000486194 KRTAP4-8Q9BYQ9 185 aa8.81□□□□□ -1
HLA-F-228ENST00000486194 KRTAP10-7P60409 375 aaPredicted RBP8.79□□□□□ -1
HLA-F-228ENST00000486194 LCE1AQ5T7P2 110 aa8.79□□□□□ -1
HLA-F-228ENST00000486194 KRTAP10-12P60413 245 aa8.78□□□□□ -1
HLA-F-228ENST00000486194 PCP4P48539 62 aa8.74□□□□□ -1.01
HLA-F-228ENST00000486194 CYSTM1Q9H1C7 97 aa8.73□□□□□ -1.01
HLA-F-228ENST00000486194 H7BZZ5 65 aa8.71□□□□□ -1.02
HLA-F-228ENST00000486194 SPRR2DP22532 72 aa8.65□□□□□ -1.02
HLA-F-228ENST00000486194 KRTAP13-4Q3LI77 160 aa8.63□□□□□ -1.03
HLA-F-228ENST00000486194 COA5Q86WW8 74 aa8.62□□□□□ -1.03
HLA-F-228ENST00000486194 CAMK2N1Q7Z7J9 78 aa8.61□□□□□ -1.03
HLA-F-228ENST00000486194 KRTAP2-2Q9BYT5 123 aa8.6□□□□□ -1.03
HLA-F-228ENST00000486194 KRTAP2-1Q9BYU5 128 aa8.6□□□□□ -1.03
HLA-F-228ENST00000486194 SEC61GP60059 68 aa8.58□□□□□ -1.04
HLA-F-228ENST00000486194 TMEM258P61165 79 aa8.56□□□□□ -1.04
HLA-F-228ENST00000486194 SERP1Q9Y6X1 66 aa8.55□□□□□ -1.04
HLA-F-228ENST00000486194 ATP5EP56381 51 aaPredicted RBP8.54□□□□□ -1.04
HLA-F-228ENST00000486194 A0A0D9SG42 100 aa8.41□□□□□ -1.06
HLA-F-228ENST00000486194 LCE3BQ5TA77 95 aa8.41□□□□□ -1.06
HLA-F-228ENST00000486194 A0A1B0GU33 70 aa8.38□□□□□ -1.07
HLA-F-228ENST00000486194 SPATA8Q6RVD6 105 aa8.35□□□□□ -1.07
HLA-F-228ENST00000486194 SPINT4Q6UDR6 99 aa8.31□□□□□ -1.08
HLA-F-228ENST00000486194 KRTAP19-7Q3SYF9 63 aa8.23□□□□□ -1.09
HLA-F-228ENST00000486194 A0A1B0GU69 56 aa8.22□□□□□ -1.09
HLA-F-228ENST00000486194 KRTAP12-1P59990 96 aa8.22□□□□□ -1.09
HLA-F-228ENST00000486194 SMIM26A0A096LP01 95 aa8.19□□□□□ -1.1
HLA-F-228ENST00000486194 MT1EP04732 61 aa8.19□□□□□ -1.1
HLA-F-228ENST00000486194 RPS28P62857 69 aaKnown RBP8.17□□□□□ -1.1
HLA-F-228ENST00000486194 LCE5AQ5TCM9 118 aa8.17□□□□□ -1.1
HLA-F-228ENST00000486194 KRTAP19-3Q7Z4W3 81 aa8.15□□□□□ -1.1
HLA-F-228ENST00000486194 KRTAP19-5Q3LI72 72 aa8.03□□□□□ -1.12
HLA-F-228ENST00000486194 A8MU10 97 aa8.01□□□□□ -1.13
HLA-F-228ENST00000486194 LINC01558Q9Y6Z2 57 aa8.01□□□□□ -1.13
HLA-F-228ENST00000486194 PRR15LQ9BU68 103 aa8□□□□□ -1.13
HLA-F-228ENST00000486194 MT1GP13640 62 aa7.97□□□□□ -1.13
HLA-F-228ENST00000486194 V9GYY9 64 aa7.97□□□□□ -1.13
HLA-F-228ENST00000486194 PP632Q6XCG6 107 aa7.96□□□□□ -1.14
HLA-F-228ENST00000486194 Q1T7F1 81 aa7.95□□□□□ -1.14
HLA-F-228ENST00000486194 DSTQ03001 7570 aaKnown RBP7.94□□□□□ -1.14
HLA-F-228ENST00000486194 TNP1P09430 55 aa7.92□□□□□ -1.14
HLA-F-228ENST00000486194 C10orf95Q9H7T3 257 aa7.86□□□□□ -1.15
HLA-F-228ENST00000486194 LCE3AQ5TA76 89 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms