RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 PKD1L1Q8TDX9 2849 aa0.65□□□□□ -2.31
FN1-222ENST00000485567 WNK1Q9H4A3 2382 aa0.64□□□□□ -2.31
FN1-222ENST00000485567 SETD2Q9BYW2 2564 aaPredicted RBP0.64□□□□□ -2.31
FN1-222ENST00000485567 NBEAL1Q6ZS30 2694 aa0.64□□□□□ -2.31
FN1-222ENST00000485567 TENM3Q9P273 2699 aa0.64□□□□□ -2.31
FN1-222ENST00000485567 DMBT1Q9UGM3 2413 aaPredicted RBP0.64□□□□□ -2.31
FN1-222ENST00000485567 H3BNG1 76 aa0.64□□□□□ -2.31
FN1-222ENST00000485567 DEFB104AQ8WTQ1 72 aa0.64□□□□□ -2.31
FN1-222ENST00000485567 LRRK2Q5S007 2527 aa0.64□□□□□ -2.31
FN1-222ENST00000485567 HIVEP3Q5T1R4 2406 aa0.64□□□□□ -2.31
FN1-222ENST00000485567 PDZD2O15018 2839 aa0.63□□□□□ -2.31
FN1-222ENST00000485567 BOD1L1Q8NFC6 3051 aa0.63□□□□□ -2.31
FN1-222ENST00000485567 ADGRG4Q8IZF6 3080 aa0.63□□□□□ -2.31
FN1-222ENST00000485567 MTORP42345 2549 aa0.62□□□□□ -2.31
FN1-222ENST00000485567 UBR4Q5T4S7 5183 aa0.62□□□□□ -2.31
FN1-222ENST00000485567 SPG11Q96JI7 2443 aa0.62□□□□□ -2.31
FN1-222ENST00000485567 AHNAK2Q8IVF2 5795 aa0.62□□□□□ -2.31
FN1-222ENST00000485567 C9orf92A6NGG3 77 aa0.62□□□□□ -2.31
FN1-222ENST00000485567 H3BSH0 61 aa0.62□□□□□ -2.31
FN1-222ENST00000485567 DEFB133Q30KQ1 61 aa0.62□□□□□ -2.31
FN1-222ENST00000485567 LINC01590Q5TEZ4 76 aa0.62□□□□□ -2.31
FN1-222ENST00000485567 CCDC168Q8NDH2 2452 aa0.62□□□□□ -2.31
FN1-222ENST00000485567 FLNAP21333 2647 aaKnown RBP0.62□□□□□ -2.31
FN1-222ENST00000485567 NBEAL2Q6ZNJ1 2754 aa0.62□□□□□ -2.31
FN1-222ENST00000485567 ATMQ13315 3056 aa0.61□□□□□ -2.31
FN1-222ENST00000485567 FLNCQ14315 2725 aa0.61□□□□□ -2.31
FN1-222ENST00000485567 LRP1Q07954 4544 aaKnown RBP0.61□□□□□ -2.31
FN1-222ENST00000485567 ANKHD1Q8IWZ3 2542 aaKnown RBP0.61□□□□□ -2.31
FN1-222ENST00000485567 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
FN1-222ENST00000485567 ACANP16112 2415 aa0.61□□□□□ -2.31
FN1-222ENST00000485567 KMT2AQ03164 3969 aa0.61□□□□□ -2.31
FN1-222ENST00000485567 USP9YO00507 2555 aaPredicted RBP0.61□□□□□ -2.31
FN1-222ENST00000485567 STAB1Q9NY15 2570 aa0.61□□□□□ -2.31
FN1-222ENST00000485567 HIVEP1P15822 2718 aa0.61□□□□□ -2.31
FN1-222ENST00000485567 VPS13BQ7Z7G8 4022 aa0.61□□□□□ -2.31
FN1-222ENST00000485567 PCLOQ9Y6V0 5065 aa0.61□□□□□ -2.31
FN1-222ENST00000485567 COL6A5A8TX70 2615 aa0.61□□□□□ -2.31
FN1-222ENST00000485567 RYR3Q15413 4870 aa0.61□□□□□ -2.31
FN1-222ENST00000485567 VPS13DQ5THJ4 4388 aa0.61□□□□□ -2.31
FN1-222ENST00000485567 CRYBG3Q68DQ2 2970 aa0.6□□□□□ -2.31
FN1-222ENST00000485567 APC2O95996 2303 aa0.6□□□□□ -2.31
FN1-222ENST00000485567 LRBAP50851 2863 aa0.6□□□□□ -2.31
FN1-222ENST00000485567 CUBNO60494 3623 aa0.6□□□□□ -2.31
FN1-222ENST00000485567 PKD1P98161 4303 aa0.6□□□□□ -2.31
FN1-222ENST00000485567 UTP20O75691 2785 aaKnown RBP0.6□□□□□ -2.31
FN1-222ENST00000485567 BIRC6Q9NR09 4857 aa0.6□□□□□ -2.31
FN1-222ENST00000485567 NIPBLQ6KC79 2804 aaeCLIP0.6□□□□□ -2.31
FN1-222ENST00000485567 EPPK1P58107 5090 aaKnown RBP0.6□□□□□ -2.31
FN1-222ENST00000485567 LAMA1P25391 3075 aa0.59□□□□□ -2.31
FN1-222ENST00000485567 KMT2CQ8NEZ4 4911 aaKnown RBP0.59□□□□□ -2.31
FN1-222ENST00000485567 STATHP02808 62 aa0.59□□□□□ -2.31
FN1-222ENST00000485567 TNP1P09430 55 aa0.59□□□□□ -2.31
FN1-222ENST00000485567 HYDINQ4G0P3 5121 aa0.59□□□□□ -2.32
FN1-222ENST00000485567 NSD1Q96L73 2696 aaPredicted RBP0.59□□□□□ -2.32
FN1-222ENST00000485567 MGAQ8IWI9 3026 aa0.59□□□□□ -2.32
FN1-222ENST00000485567 ITPR2Q14571 2701 aa0.58□□□□□ -2.32
FN1-222ENST00000485567 DNAH2Q9P225 4427 aa0.58□□□□□ -2.32
FN1-222ENST00000485567 AKAP9Q99996 3911 aa0.58□□□□□ -2.32
FN1-222ENST00000485567 ACACAQ13085 2346 aa0.58□□□□□ -2.32
FN1-222ENST00000485567 VPS13CQ709C8 3753 aa0.58□□□□□ -2.32
FN1-222ENST00000485567 HSPG2P98160 4391 aa0.58□□□□□ -2.32
FN1-222ENST00000485567 TLN2Q9Y4G6 2542 aa0.58□□□□□ -2.32
FN1-222ENST00000485567 DNAH9Q9NYC9 4486 aa0.58□□□□□ -2.32
FN1-222ENST00000485567 LPAP08519 4548 aa0.57□□□□□ -2.32
FN1-222ENST00000485567 CENPEQ02224 2701 aa0.57□□□□□ -2.32
FN1-222ENST00000485567 SPRR2DP22532 72 aa0.57□□□□□ -2.32
FN1-222ENST00000485567 PRCDQ00LT1 54 aa0.57□□□□□ -2.32
FN1-222ENST00000485567 DEFB110Q30KQ9 67 aa0.57□□□□□ -2.32
FN1-222ENST00000485567 ANK3Q12955 4377 aaKnown RBP0.57□□□□□ -2.32
FN1-222ENST00000485567 SVEP1Q4LDE5 3571 aa0.56□□□□□ -2.32
FN1-222ENST00000485567 FSIP2Q5CZC0 6907 aa0.56□□□□□ -2.32
FN1-222ENST00000485567 MGAM2Q2M2H8 2515 aa0.56□□□□□ -2.32
FN1-222ENST00000485567 RYR2Q92736 4967 aa0.55□□□□□ -2.32
FN1-222ENST00000485567 TGP01266 2768 aa0.55□□□□□ -2.32
FN1-222ENST00000485567 TACC2O95359 2948 aa0.55□□□□□ -2.32
FN1-222ENST00000485567 RYR1P21817 5038 aa0.55□□□□□ -2.32
FN1-222ENST00000485567 HERC2O95714 4834 aa0.55□□□□□ -2.32
FN1-222ENST00000485567 DYNC2H1Q8NCM8 4307 aaKnown RBP0.54□□□□□ -2.32
FN1-222ENST00000485567 MXRA5Q9NR99 2828 aa0.54□□□□□ -2.32
FN1-222ENST00000485567 DCHS2Q6V1P9 2916 aa0.54□□□□□ -2.32
FN1-222ENST00000485567 DNAH3Q8TD57 4116 aa0.54□□□□□ -2.32
FN1-222ENST00000485567 MAP1AP78559 2803 aaPredicted RBP0.53□□□□□ -2.32
FN1-222ENST00000485567 APOBP04114 4563 aaKnown RBP0.53□□□□□ -2.32
FN1-222ENST00000485567 DEFB108AA8MXU0 73 aa0.53□□□□□ -2.32
FN1-222ENST00000485567 TENM2Q9NT68 2774 aa0.53□□□□□ -2.32
FN1-222ENST00000485567 HERC1Q15751 4861 aa0.53□□□□□ -2.32
FN1-222ENST00000485567 PKHD1L1Q86WI1 4243 aa0.53□□□□□ -2.32
FN1-222ENST00000485567 ZANQ9Y493 2812 aa0.53□□□□□ -2.32
FN1-222ENST00000485567 KIAA1109Q2LD37 5005 aa0.53□□□□□ -2.33
FN1-222ENST00000485567 DNAH8Q96JB1 4490 aa0.52□□□□□ -2.33
FN1-222ENST00000485567 HRNRQ86YZ3 2850 aaPredicted RBP0.52□□□□□ -2.33
FN1-222ENST00000485567 SONP18583 2426 aaKnown RBP0.52□□□□□ -2.33
FN1-222ENST00000485567 TRRAPQ9Y4A5 3859 aa0.51□□□□□ -2.33
FN1-222ENST00000485567 ABCA13Q86UQ4 5058 aa0.51□□□□□ -2.33
FN1-222ENST00000485567 SPART-AS1P0CW21 52 aa0.51□□□□□ -2.33
FN1-222ENST00000485567 SPRR2BP35325 72 aa0.51□□□□□ -2.33
FN1-222ENST00000485567 MUC2Q02817 5179 aa0.51□□□□□ -2.33
FN1-222ENST00000485567 DNAH1Q9P2D7 4330 aa0.51□□□□□ -2.33
FN1-222ENST00000485567 HECTD4Q9Y4D8 3996 aa0.51□□□□□ -2.33
FN1-222ENST00000485567 COL7A1Q02388 2944 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms