RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 FRAS1Q86XX4 4008 aa5□□□□□ -1.61
SND1-211ENST00000484767 Q8N1X5 172 aa5□□□□□ -1.61
SND1-211ENST00000484767 KIAA1109Q2LD37 5005 aa5□□□□□ -1.61
SND1-211ENST00000484767 STARD9Q9P2P6 4700 aa5□□□□□ -1.61
SND1-211ENST00000484767 KRTAP9-7A8MTY7 169 aa4.98□□□□□ -1.61
SND1-211ENST00000484767 ADM2Q7Z4H4 148 aa4.98□□□□□ -1.61
SND1-211ENST00000484767 A0A0A0MQY5 61 aa4.97□□□□□ -1.61
SND1-211ENST00000484767 A0A1B0GU33 70 aa4.96□□□□□ -1.62
SND1-211ENST00000484767 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
SND1-211ENST00000484767 H1FX-AS1Q4G0G2 97 aa4.95□□□□□ -1.62
SND1-211ENST00000484767 ABCA13Q86UQ4 5058 aa4.94□□□□□ -1.62
SND1-211ENST00000484767 H0YAA0 97 aa4.93□□□□□ -1.62
SND1-211ENST00000484767 CSAG1Q6PB30 78 aa4.93□□□□□ -1.62
SND1-211ENST00000484767 COX6B2Q6YFQ2 88 aa4.93□□□□□ -1.62
SND1-211ENST00000484767 DNAH11Q96DT5 4516 aa4.93□□□□□ -1.62
SND1-211ENST00000484767 KRTAP3-1Q9BYR8 98 aa4.92□□□□□ -1.62
SND1-211ENST00000484767 K7ERS5 55 aa4.9□□□□□ -1.63
SND1-211ENST00000484767 C9orf92A6NGG3 77 aa4.89□□□□□ -1.63
SND1-211ENST00000484767 DNAH5Q8TE73 4624 aa4.88□□□□□ -1.63
SND1-211ENST00000484767 KRTAP4-5Q9BYR2 181 aa4.88□□□□□ -1.63
SND1-211ENST00000484767 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
SND1-211ENST00000484767 KMT2AQ03164 3969 aa4.87□□□□□ -1.63
SND1-211ENST00000484767 KRTAP10-4P60372 401 aaPredicted RBP4.87□□□□□ -1.63
SND1-211ENST00000484767 UBR4Q5T4S7 5183 aa4.86□□□□□ -1.63
SND1-211ENST00000484767 KRTAP25-1Q3LHN0 102 aa4.86□□□□□ -1.63
SND1-211ENST00000484767 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
SND1-211ENST00000484767 HERC1Q15751 4861 aa4.85□□□□□ -1.63
SND1-211ENST00000484767 A0A1B0GVY2 172 aa4.85□□□□□ -1.63
SND1-211ENST00000484767 PKD1P98161 4303 aa4.85□□□□□ -1.63
SND1-211ENST00000484767 SMR3BP02814 79 aaPredicted RBP4.81□□□□□ -1.64
SND1-211ENST00000484767 KRTAP9-3Q9BYQ3 159 aa4.8□□□□□ -1.64
SND1-211ENST00000484767 LRP1BQ9NZR2 4599 aa4.79□□□□□ -1.64
SND1-211ENST00000484767 DMBT1Q9UGM3 2413 aaPredicted RBP4.79□□□□□ -1.64
SND1-211ENST00000484767 PKHD1P08F94 4074 aa4.78□□□□□ -1.64
SND1-211ENST00000484767 RPL37P61927 97 aaKnown RBP4.77□□□□□ -1.65
SND1-211ENST00000484767 ROMO1P60602 79 aa4.76□□□□□ -1.65
SND1-211ENST00000484767 FAT2Q9NYQ8 4349 aa4.75□□□□□ -1.65
SND1-211ENST00000484767 KRTAP10-8P60410 259 aa4.74□□□□□ -1.65
SND1-211ENST00000484767 KRTAP10-6P60371 365 aaPredicted RBP4.73□□□□□ -1.65
SND1-211ENST00000484767 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
SND1-211ENST00000484767 S4R3F8 94 aa4.72□□□□□ -1.65
SND1-211ENST00000484767 HSPG2P98160 4391 aa4.71□□□□□ -1.66
SND1-211ENST00000484767 VPS13BQ7Z7G8 4022 aa4.7□□□□□ -1.66
SND1-211ENST00000484767 DYNC1H1Q14204 4646 aaKnown RBP4.69□□□□□ -1.66
SND1-211ENST00000484767 PKHD1L1Q86WI1 4243 aa4.69□□□□□ -1.66
SND1-211ENST00000484767 FLG2Q5D862 2391 aaPredicted RBP4.67□□□□□ -1.66
SND1-211ENST00000484767 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
SND1-211ENST00000484767 KRTAP4-11Q9BYQ6 195 aa4.67□□□□□ -1.66
SND1-211ENST00000484767 SEC61BP60468 96 aaKnown RBP4.66□□□□□ -1.66
SND1-211ENST00000484767 APOBP04114 4563 aaKnown RBP4.64□□□□□ -1.67
SND1-211ENST00000484767 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
SND1-211ENST00000484767 Q5VSD8 79 aa4.6□□□□□ -1.67
SND1-211ENST00000484767 M0QZ58 72 aa4.59□□□□□ -1.67
SND1-211ENST00000484767 A0A0D9SG42 100 aa4.58□□□□□ -1.68
SND1-211ENST00000484767 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
SND1-211ENST00000484767 KRTAP9-8Q9BYQ0 159 aa4.58□□□□□ -1.68
SND1-211ENST00000484767 P0C880 135 aa4.57□□□□□ -1.68
SND1-211ENST00000484767 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
SND1-211ENST00000484767 TPRXLQ17RH7 258 aa4.55□□□□□ -1.68
SND1-211ENST00000484767 MYCBP2O75592 4640 aa4.54□□□□□ -1.68
SND1-211ENST00000484767 KRTAP12-1P59990 96 aa4.53□□□□□ -1.68
SND1-211ENST00000484767 KRTAP12-2P59991 146 aa4.51□□□□□ -1.69
SND1-211ENST00000484767 MT1HL1P0DM35 61 aa4.5□□□□□ -1.69
SND1-211ENST00000484767 SPINT4Q6UDR6 99 aa4.5□□□□□ -1.69
SND1-211ENST00000484767 TNXBP22105 4242 aa4.49□□□□□ -1.69
SND1-211ENST00000484767 HMCN2Q8NDA2 5059 aa4.48□□□□□ -1.69
SND1-211ENST00000484767 FAT1Q14517 4588 aa4.48□□□□□ -1.69
SND1-211ENST00000484767 FAT3Q8TDW7 4589 aa4.48□□□□□ -1.69
SND1-211ENST00000484767 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
SND1-211ENST00000484767 LRP1Q07954 4544 aaKnown RBP4.44□□□□□ -1.7
SND1-211ENST00000484767 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
SND1-211ENST00000484767 RNF213Q63HN8 5207 aa4.42□□□□□ -1.7
SND1-211ENST00000484767 R4GN34 69 aa4.35□□□□□ -1.71
SND1-211ENST00000484767 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
SND1-211ENST00000484767 LRP2P98164 4655 aa4.29□□□□□ -1.72
SND1-211ENST00000484767 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
SND1-211ENST00000484767 PP632Q6XCG6 107 aa4.28□□□□□ -1.72
SND1-211ENST00000484767 PLAC4Q8WY50 150 aa4.21□□□□□ -1.74
SND1-211ENST00000484767 FAT4Q6V0I7 4981 aa4.2□□□□□ -1.74
SND1-211ENST00000484767 CAMK2N1Q7Z7J9 78 aa4.2□□□□□ -1.74
SND1-211ENST00000484767 KRTAP19-2Q3LHN2 52 aa4.17□□□□□ -1.74
SND1-211ENST00000484767 MUC2Q02817 5179 aa4.17□□□□□ -1.74
SND1-211ENST00000484767 KRTAP4-1Q9BYQ7 146 aa4.15□□□□□ -1.75
SND1-211ENST00000484767 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
SND1-211ENST00000484767 CRCT1Q9UGL9 99 aa4.08□□□□□ -1.76
SND1-211ENST00000484767 TNP1P09430 55 aa4.06□□□□□ -1.76
SND1-211ENST00000484767 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
SND1-211ENST00000484767 LPAP08519 4548 aa4□□□□□ -1.77
SND1-211ENST00000484767 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
SND1-211ENST00000484767 SPRR2GQ9BYE4 73 aa3.94□□□□□ -1.78
SND1-211ENST00000484767 FLGP20930 4061 aaPredicted RBP3.82□□□□□ -1.8
SND1-211ENST00000484767 PRO2289Q9P1D8 64 aa3.79□□□□□ -1.8
SND1-211ENST00000484767 KRTAP19-8Q3LI54 63 aa3.77□□□□□ -1.81
SND1-211ENST00000484767 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
SND1-211ENST00000484767 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
SND1-211ENST00000484767 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
SND1-211ENST00000484767 M0R2T5 61 aa3.74□□□□□ -1.81
SND1-211ENST00000484767 MT1HP80294 61 aa3.74□□□□□ -1.81
SND1-211ENST00000484767 MT2AP02795 61 aa3.72□□□□□ -1.81
SND1-211ENST00000484767 KRTAP10-10P60014 251 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms