RNA–Protein interactions for RNA: ENST00000484686.1

CNTN4-216, Transcript of contactin 4, humanhuman

TSL 1 (best)

Gene CNTN4, Length 3,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-216ENST00000484686 NOTCH2NLQ7Z3S9 236 aa3.11□□□□□ -1.91
CNTN4-216ENST00000484686 A8MWP4 228 aa3.11□□□□□ -1.91
CNTN4-216ENST00000484686 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
CNTN4-216ENST00000484686 LINC00304Q8N9R0 145 aa3.1□□□□□ -1.91
CNTN4-216ENST00000484686 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
CNTN4-216ENST00000484686 IGFL1Q6UW32 110 aa3.09□□□□□ -1.91
CNTN4-216ENST00000484686 C8orf17Q9NRJ1 99 aa3.09□□□□□ -1.91
CNTN4-216ENST00000484686 DEFB116Q30KQ4 102 aa3.08□□□□□ -1.92
CNTN4-216ENST00000484686 SSBP3-AS1Q7Z2R9 100 aa3.08□□□□□ -1.92
CNTN4-216ENST00000484686 H0Y9P7 68 aa3.08□□□□□ -1.92
CNTN4-216ENST00000484686 SPANXA2-OT1Q8N9U9 137 aa3.07□□□□□ -1.92
CNTN4-216ENST00000484686 C20orf166-AS1Q96NR2 134 aa3.07□□□□□ -1.92
CNTN4-216ENST00000484686 LPAP08519 4548 aa3.07□□□□□ -1.92
CNTN4-216ENST00000484686 A0A087WSZ3 146 aa3.06□□□□□ -1.92
CNTN4-216ENST00000484686 SPINK1P00995 79 aa3.06□□□□□ -1.92
CNTN4-216ENST00000484686 KRTAP19-1Q8IUB9 90 aa3.06□□□□□ -1.92
CNTN4-216ENST00000484686 IGLV8-61A0A075B6I0 122 aa3.05□□□□□ -1.92
CNTN4-216ENST00000484686 LRP2P98164 4655 aa3.05□□□□□ -1.92
CNTN4-216ENST00000484686 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
CNTN4-216ENST00000484686 UBR4Q5T4S7 5183 aa3.05□□□□□ -1.92
CNTN4-216ENST00000484686 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
CNTN4-216ENST00000484686 H3BQ85 93 aa3.04□□□□□ -1.92
CNTN4-216ENST00000484686 KRTAP4-9Q9BYQ8 210 aa3.04□□□□□ -1.92
CNTN4-216ENST00000484686 MUC2Q02817 5179 aa3.04□□□□□ -1.92
CNTN4-216ENST00000484686 RNF213Q63HN8 5207 aa3.04□□□□□ -1.92
CNTN4-216ENST00000484686 A8MUU9 505 aa3.03□□□□□ -1.92
CNTN4-216ENST00000484686 HMCN2Q8NDA2 5059 aa3.03□□□□□ -1.93
CNTN4-216ENST00000484686 K7EQZ3 153 aa3.02□□□□□ -1.93
CNTN4-216ENST00000484686 WFDC13Q8IUB5 93 aa3.01□□□□□ -1.93
CNTN4-216ENST00000484686 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
CNTN4-216ENST00000484686 A0A1B0GW54 56 aa3.01□□□□□ -1.93
CNTN4-216ENST00000484686 IGLV7-46A0A075B6I9 117 aa3□□□□□ -1.93
CNTN4-216ENST00000484686 PCOTHQ58A44 107 aa3□□□□□ -1.93
CNTN4-216ENST00000484686 SPATA8Q6RVD6 105 aa3□□□□□ -1.93
CNTN4-216ENST00000484686 C9orf92A6NGG3 77 aa3□□□□□ -1.93
CNTN4-216ENST00000484686 CRIPTQ9P021 101 aa2.99□□□□□ -1.93
CNTN4-216ENST00000484686 DSCR10P59022 87 aa2.99□□□□□ -1.93
CNTN4-216ENST00000484686 K7ERS5 55 aa2.98□□□□□ -1.93
CNTN4-216ENST00000484686 RPS29P62273 56 aaKnown RBP2.98□□□□□ -1.93
CNTN4-216ENST00000484686 SPINT4Q6UDR6 99 aa2.98□□□□□ -1.93
CNTN4-216ENST00000484686 HRES1P13985 223 aa2.98□□□□□ -1.93
CNTN4-216ENST00000484686 Q96NJ1 140 aa2.97□□□□□ -1.93
CNTN4-216ENST00000484686 LINC00472Q9H8W2 130 aa2.96□□□□□ -1.94
CNTN4-216ENST00000484686 A0A1B0GU69 56 aa2.96□□□□□ -1.94
CNTN4-216ENST00000484686 H3BPC8 53 aa2.94□□□□□ -1.94
CNTN4-216ENST00000484686 UQCR11O14957 56 aa2.94□□□□□ -1.94
CNTN4-216ENST00000484686 KRTAP13-3Q3SY46 172 aa2.94□□□□□ -1.94
CNTN4-216ENST00000484686 TPRXLQ17RH7 258 aa2.93□□□□□ -1.94
CNTN4-216ENST00000484686 A0A1B0GVX0 72 aa2.91□□□□□ -1.94
CNTN4-216ENST00000484686 Q5W150 140 aa2.9□□□□□ -1.94
CNTN4-216ENST00000484686 KRTAP15-1Q3LI76 137 aa2.9□□□□□ -1.95
CNTN4-216ENST00000484686 DMAC1Q96GE9 116 aa2.9□□□□□ -1.95
CNTN4-216ENST00000484686 FAT4Q6V0I7 4981 aa2.86□□□□□ -1.95
CNTN4-216ENST00000484686 MMP24-AS1A0A0U1RRL7 71 aa2.86□□□□□ -1.95
CNTN4-216ENST00000484686 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
CNTN4-216ENST00000484686 RPL37P61927 97 aaKnown RBP2.85□□□□□ -1.95
CNTN4-216ENST00000484686 MRPL34Q9BQ48 92 aaKnown RBP2.84□□□□□ -1.96
CNTN4-216ENST00000484686 KRTAP4-1Q9BYQ7 146 aa2.84□□□□□ -1.96
CNTN4-216ENST00000484686 ACYP2P14621 99 aa2.81□□□□□ -1.96
CNTN4-216ENST00000484686 IGKV2D-30A0A075B6S6 120 aa2.78□□□□□ -1.96
CNTN4-216ENST00000484686 IGKV2-30P06310 120 aa2.78□□□□□ -1.96
CNTN4-216ENST00000484686 MUC17Q685J3 4493 aa2.78□□□□□ -1.96
CNTN4-216ENST00000484686 H0YAA0 97 aa2.75□□□□□ -1.97
CNTN4-216ENST00000484686 C10orf95Q9H7T3 257 aa2.75□□□□□ -1.97
CNTN4-216ENST00000484686 COX6B2Q6YFQ2 88 aa2.74□□□□□ -1.97
CNTN4-216ENST00000484686 CAMK2N1Q7Z7J9 78 aa2.74□□□□□ -1.97
CNTN4-216ENST00000484686 TP53AIP1Q9HCN2 124 aa2.74□□□□□ -1.97
CNTN4-216ENST00000484686 KRTAP19-2Q3LHN2 52 aa2.71□□□□□ -1.98
CNTN4-216ENST00000484686 LCE5AQ5TCM9 118 aa2.71□□□□□ -1.98
CNTN4-216ENST00000484686 M0R2T5 61 aa2.68□□□□□ -1.98
CNTN4-216ENST00000484686 FSIP2Q5CZC0 6907 aa2.66□□□□□ -1.98
CNTN4-216ENST00000484686 MT1HP80294 61 aa2.66□□□□□ -1.98
CNTN4-216ENST00000484686 FLGP20930 4061 aaPredicted RBP2.66□□□□□ -1.98
CNTN4-216ENST00000484686 KRTAP3-1Q9BYR8 98 aa2.65□□□□□ -1.98
CNTN4-216ENST00000484686 A0A1B0GU33 70 aa2.65□□□□□ -1.99
CNTN4-216ENST00000484686 H1FX-AS1Q4G0G2 97 aa2.62□□□□□ -1.99
CNTN4-216ENST00000484686 KRTAP9-3Q9BYQ3 159 aa2.6□□□□□ -1.99
CNTN4-216ENST00000484686 R4GN34 69 aa2.6□□□□□ -1.99
CNTN4-216ENST00000484686 S4R3F8 94 aa2.58□□□□□ -2
CNTN4-216ENST00000484686 KRTAP10-6P60371 365 aaPredicted RBP2.57□□□□□ -2
CNTN4-216ENST00000484686 PRO2289Q9P1D8 64 aa2.57□□□□□ -2
CNTN4-216ENST00000484686 KRTAP23-1A1A580 65 aa2.56□□□□□ -2
CNTN4-216ENST00000484686 USH2AO75445 5202 aa2.56□□□□□ -2
CNTN4-216ENST00000484686 LCE4AQ5TA78 99 aa2.55□□□□□ -2
CNTN4-216ENST00000484686 KRTAP9-7A8MTY7 169 aa2.55□□□□□ -2
CNTN4-216ENST00000484686 PLAC4Q8WY50 150 aa2.54□□□□□ -2
CNTN4-216ENST00000484686 KRTAP10-10P60014 251 aa2.53□□□□□ -2
CNTN4-216ENST00000484686 A0A0D9SG42 100 aa2.53□□□□□ -2.01
CNTN4-216ENST00000484686 MT2AP02795 61 aa2.52□□□□□ -2.01
CNTN4-216ENST00000484686 MT1FP04733 61 aa2.52□□□□□ -2.01
CNTN4-216ENST00000484686 KRTAP13-4Q3LI77 160 aa2.43□□□□□ -2.02
CNTN4-216ENST00000484686 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
CNTN4-216ENST00000484686 CRCT1Q9UGL9 99 aa2.43□□□□□ -2.02
CNTN4-216ENST00000484686 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
CNTN4-216ENST00000484686 M0QZ58 72 aa2.4□□□□□ -2.03
CNTN4-216ENST00000484686 KRTAP12-2P59991 146 aa2.39□□□□□ -2.03
CNTN4-216ENST00000484686 SPRR2GQ9BYE4 73 aa2.37□□□□□ -2.03
CNTN4-216ENST00000484686 INE1O15225 51 aa2.35□□□□□ -2.03
CNTN4-216ENST00000484686 FCGBPQ9Y6R7 5405 aaPredicted RBP2.34□□□□□ -2.04
CNTN4-216ENST00000484686 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms