RNA–Protein interactions for RNA: ENST00000484389.6

TDRD3-207, Transcript of tudor domain containing 3, humanhuman

TSL 2

Gene TDRD3, Length 1,863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-207ENST00000484389 SPINK6Q6UWN8 80 aa2.87□□□□□ -1.95
TDRD3-207ENST00000484389 HTN3P15516 51 aa2.86□□□□□ -1.95
TDRD3-207ENST00000484389 DEFB4AO15263 64 aa2.85□□□□□ -1.95
TDRD3-207ENST00000484389 A0A0D9SG42 100 aa2.82□□□□□ -1.96
TDRD3-207ENST00000484389 APLNQ9ULZ1 77 aa2.82□□□□□ -1.96
TDRD3-207ENST00000484389 SRRM2Q9UQ35 2752 aaKnown RBP2.82□□□□□ -1.96
TDRD3-207ENST00000484389 Q6ZRN7 208 aaPredicted RBP2.82□□□□□ -1.96
TDRD3-207ENST00000484389 FAT4Q6V0I7 4981 aa2.81□□□□□ -1.96
TDRD3-207ENST00000484389 KRTAP10-8P60410 259 aa2.81□□□□□ -1.96
TDRD3-207ENST00000484389 KRTAP1-5Q9BYS1 174 aa2.8□□□□□ -1.96
TDRD3-207ENST00000484389 S4R3F8 94 aa2.8□□□□□ -1.96
TDRD3-207ENST00000484389 ANK2Q01484 3957 aa2.8□□□□□ -1.96
TDRD3-207ENST00000484389 CSMD3Q7Z407 3707 aa2.8□□□□□ -1.96
TDRD3-207ENST00000484389 SPART-AS1P0CW21 52 aa2.78□□□□□ -1.96
TDRD3-207ENST00000484389 KRTAP13-4Q3LI77 160 aa2.78□□□□□ -1.96
TDRD3-207ENST00000484389 LINC01556Q5JQF7 62 aa2.78□□□□□ -1.96
TDRD3-207ENST00000484389 UBE2DNLQ8IWF7 75 aa2.78□□□□□ -1.96
TDRD3-207ENST00000484389 HRNRQ86YZ3 2850 aaPredicted RBP2.78□□□□□ -1.96
TDRD3-207ENST00000484389 KRTAP13-1Q8IUC0 172 aa2.77□□□□□ -1.97
TDRD3-207ENST00000484389 VPS13CQ709C8 3753 aa2.77□□□□□ -1.97
TDRD3-207ENST00000484389 KRTAP5-9P26371 169 aa2.76□□□□□ -1.97
TDRD3-207ENST00000484389 DEFB135Q30KP9 77 aa2.76□□□□□ -1.97
TDRD3-207ENST00000484389 INE1O15225 51 aa2.75□□□□□ -1.97
TDRD3-207ENST00000484389 KRTAP12-2P59991 146 aa2.74□□□□□ -1.97
TDRD3-207ENST00000484389 PRKDCP78527 4128 aaKnown RBP2.74□□□□□ -1.97
TDRD3-207ENST00000484389 H3BNG1 76 aa2.73□□□□□ -1.97
TDRD3-207ENST00000484389 KRTAP10-6P60371 365 aaPredicted RBP2.72□□□□□ -1.97
TDRD3-207ENST00000484389 FSIP2Q5CZC0 6907 aa2.71□□□□□ -1.98
TDRD3-207ENST00000484389 NEBP20929 6669 aa2.68□□□□□ -1.98
TDRD3-207ENST00000484389 KRTAP12-1P59990 96 aa2.68□□□□□ -1.98
TDRD3-207ENST00000484389 DEFB124Q8NES8 71 aa2.66□□□□□ -1.98
TDRD3-207ENST00000484389 DYNC2H1Q8NCM8 4307 aaKnown RBP2.65□□□□□ -1.99
TDRD3-207ENST00000484389 DMBT1Q9UGM3 2413 aaPredicted RBP2.65□□□□□ -1.99
TDRD3-207ENST00000484389 COL7A1Q02388 2944 aa2.64□□□□□ -1.99
TDRD3-207ENST00000484389 KRTAP2-2Q9BYT5 123 aa2.62□□□□□ -1.99
TDRD3-207ENST00000484389 FRAS1Q86XX4 4008 aa2.62□□□□□ -1.99
TDRD3-207ENST00000484389 DNAH1Q9P2D7 4330 aa2.62□□□□□ -1.99
TDRD3-207ENST00000484389 SSPOA2VEC9 5147 aa2.61□□□□□ -1.99
TDRD3-207ENST00000484389 TRRAPQ9Y4A5 3859 aa2.61□□□□□ -1.99
TDRD3-207ENST00000484389 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
TDRD3-207ENST00000484389 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
TDRD3-207ENST00000484389 STAB2Q8WWQ8 2551 aa2.6□□□□□ -1.99
TDRD3-207ENST00000484389 RNF213Q63HN8 5207 aa2.59□□□□□ -1.99
TDRD3-207ENST00000484389 VPS13DQ5THJ4 4388 aa2.59□□□□□ -2
TDRD3-207ENST00000484389 SACSQ9NZJ4 4579 aa2.57□□□□□ -2
TDRD3-207ENST00000484389 LCE1FQ5T754 118 aa2.57□□□□□ -2
TDRD3-207ENST00000484389 PP632Q6XCG6 107 aa2.56□□□□□ -2
TDRD3-207ENST00000484389 ZNF469Q96JG9 3925 aaPredicted RBP2.56□□□□□ -2
TDRD3-207ENST00000484389 KRTAP1-4P0C5Y4 121 aa2.56□□□□□ -2
TDRD3-207ENST00000484389 SMR3AQ99954 134 aa2.55□□□□□ -2
TDRD3-207ENST00000484389 ANK3Q12955 4377 aaKnown RBP2.54□□□□□ -2
TDRD3-207ENST00000484389 SYNE2Q8WXH0 6885 aaKnown RBP2.54□□□□□ -2
TDRD3-207ENST00000484389 DNAH11Q96DT5 4516 aa2.53□□□□□ -2
TDRD3-207ENST00000484389 MYCBP2O75592 4640 aa2.53□□□□□ -2
TDRD3-207ENST00000484389 DNAH10Q8IVF4 4471 aa2.52□□□□□ -2.01
TDRD3-207ENST00000484389 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
TDRD3-207ENST00000484389 LYSTQ99698 3801 aa2.52□□□□□ -2.01
TDRD3-207ENST00000484389 DNAH8Q96JB1 4490 aa2.51□□□□□ -2.01
TDRD3-207ENST00000484389 HECTD4Q9Y4D8 3996 aa2.51□□□□□ -2.01
TDRD3-207ENST00000484389 M0QZ58 72 aa2.5□□□□□ -2.01
TDRD3-207ENST00000484389 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
TDRD3-207ENST00000484389 DNAH17Q9UFH2 4485 aa2.49□□□□□ -2.01
TDRD3-207ENST00000484389 KRTAP10-3P60369 221 aa2.49□□□□□ -2.01
TDRD3-207ENST00000484389 KRTAP13-2Q52LG2 175 aa2.49□□□□□ -2.01
TDRD3-207ENST00000484389 HMCN2Q8NDA2 5059 aa2.48□□□□□ -2.01
TDRD3-207ENST00000484389 CMYA5Q8N3K9 4069 aa2.46□□□□□ -2.02
TDRD3-207ENST00000484389 KRTAP10-12P60413 245 aa2.45□□□□□ -2.02
TDRD3-207ENST00000484389 KMT2AQ03164 3969 aa2.44□□□□□ -2.02
TDRD3-207ENST00000484389 KRTAP10-9P60411 292 aa2.43□□□□□ -2.02
TDRD3-207ENST00000484389 C9orf92A6NGG3 77 aa2.41□□□□□ -2.02
TDRD3-207ENST00000484389 Q5VSD8 79 aa2.41□□□□□ -2.02
TDRD3-207ENST00000484389 DNAH9Q9NYC9 4486 aa2.41□□□□□ -2.02
TDRD3-207ENST00000484389 A0A1B0GVY2 172 aa2.39□□□□□ -2.03
TDRD3-207ENST00000484389 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
TDRD3-207ENST00000484389 MACF1Q9UPN3 7388 aaKnown RBP2.39□□□□□ -2.03
TDRD3-207ENST00000484389 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
TDRD3-207ENST00000484389 FAT3Q8TDW7 4589 aa2.36□□□□□ -2.03
TDRD3-207ENST00000484389 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
TDRD3-207ENST00000484389 PKHD1P08F94 4074 aa2.35□□□□□ -2.03
TDRD3-207ENST00000484389 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
TDRD3-207ENST00000484389 DNAH7Q8WXX0 4024 aa2.33□□□□□ -2.04
TDRD3-207ENST00000484389 DNAH6Q9C0G6 4158 aa2.33□□□□□ -2.04
TDRD3-207ENST00000484389 RPS29P62273 56 aaKnown RBP2.33□□□□□ -2.04
TDRD3-207ENST00000484389 DNAH2Q9P225 4427 aa2.3□□□□□ -2.04
TDRD3-207ENST00000484389 APOBP04114 4563 aaKnown RBP2.3□□□□□ -2.04
TDRD3-207ENST00000484389 HUWE1Q7Z6Z7 4374 aaKnown RBP2.28□□□□□ -2.04
TDRD3-207ENST00000484389 DNAH3Q8TD57 4116 aa2.28□□□□□ -2.04
TDRD3-207ENST00000484389 KRTAP10-10P60014 251 aa2.28□□□□□ -2.04
TDRD3-207ENST00000484389 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
TDRD3-207ENST00000484389 TNP1P09430 55 aa2.25□□□□□ -2.05
TDRD3-207ENST00000484389 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
TDRD3-207ENST00000484389 KRTAP10-5P60370 271 aa2.24□□□□□ -2.05
TDRD3-207ENST00000484389 HSPG2P98160 4391 aa2.22□□□□□ -2.05
TDRD3-207ENST00000484389 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
TDRD3-207ENST00000484389 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
TDRD3-207ENST00000484389 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
TDRD3-207ENST00000484389 KRTAP6-3Q3LI67 103 aa2.21□□□□□ -2.06
TDRD3-207ENST00000484389 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
TDRD3-207ENST00000484389 DYNC1H1Q14204 4646 aaKnown RBP2.21□□□□□ -2.06
TDRD3-207ENST00000484389 KMT2DO14686 5537 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms