RNA–Protein interactions for RNA: ENST00000484268.1

ABCA13-206, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,340 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-206ENST00000484268 KRTAP10-2P60368 255 aa3.75□□□□□ -1.81
ABCA13-206ENST00000484268 KRTAP1-4P0C5Y4 121 aa3.72□□□□□ -1.81
ABCA13-206ENST00000484268 KRTAP13-4Q3LI77 160 aa3.72□□□□□ -1.81
ABCA13-206ENST00000484268 VPS13BQ7Z7G8 4022 aa3.7□□□□□ -1.82
ABCA13-206ENST00000484268 DNAH5Q8TE73 4624 aa3.7□□□□□ -1.82
ABCA13-206ENST00000484268 FAT2Q9NYQ8 4349 aa3.7□□□□□ -1.82
ABCA13-206ENST00000484268 PRKDCP78527 4128 aaKnown RBP3.69□□□□□ -1.82
ABCA13-206ENST00000484268 KRTAP10-1P60331 282 aa3.68□□□□□ -1.82
ABCA13-206ENST00000484268 KRTAP10-6P60371 365 aaPredicted RBP3.67□□□□□ -1.82
ABCA13-206ENST00000484268 S4R3F8 94 aa3.62□□□□□ -1.83
ABCA13-206ENST00000484268 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
ABCA13-206ENST00000484268 RPS29P62273 56 aaKnown RBP3.61□□□□□ -1.83
ABCA13-206ENST00000484268 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
ABCA13-206ENST00000484268 KRTAP12-2P59991 146 aa3.6□□□□□ -1.83
ABCA13-206ENST00000484268 SMR3BP02814 79 aaPredicted RBP3.6□□□□□ -1.83
ABCA13-206ENST00000484268 PKD1P98161 4303 aa3.59□□□□□ -1.83
ABCA13-206ENST00000484268 HYDINQ4G0P3 5121 aa3.59□□□□□ -1.83
ABCA13-206ENST00000484268 XP32Q5T750 250 aa3.58□□□□□ -1.84
ABCA13-206ENST00000484268 PKHD1P08F94 4074 aa3.57□□□□□ -1.84
ABCA13-206ENST00000484268 KRTAP12-1P59990 96 aa3.55□□□□□ -1.84
ABCA13-206ENST00000484268 CAMK2N1Q7Z7J9 78 aa3.55□□□□□ -1.84
ABCA13-206ENST00000484268 FAT1Q14517 4588 aa3.55□□□□□ -1.84
ABCA13-206ENST00000484268 KRTAP10-8P60410 259 aa3.54□□□□□ -1.84
ABCA13-206ENST00000484268 MYCBP2O75592 4640 aa3.53□□□□□ -1.84
ABCA13-206ENST00000484268 HSPG2P98160 4391 aa3.5□□□□□ -1.85
ABCA13-206ENST00000484268 PLAC4Q8WY50 150 aa3.48□□□□□ -1.85
ABCA13-206ENST00000484268 SACSQ9NZJ4 4579 aa3.48□□□□□ -1.85
ABCA13-206ENST00000484268 DYNC1H1Q14204 4646 aaKnown RBP3.48□□□□□ -1.85
ABCA13-206ENST00000484268 RYR2Q92736 4967 aa3.45□□□□□ -1.86
ABCA13-206ENST00000484268 APOBP04114 4563 aaKnown RBP3.45□□□□□ -1.86
ABCA13-206ENST00000484268 LRP1Q07954 4544 aaKnown RBP3.44□□□□□ -1.86
ABCA13-206ENST00000484268 RYR3Q15413 4870 aa3.44□□□□□ -1.86
ABCA13-206ENST00000484268 KMT2CQ8NEZ4 4911 aaKnown RBP3.43□□□□□ -1.86
ABCA13-206ENST00000484268 M0QZ58 72 aa3.43□□□□□ -1.86
ABCA13-206ENST00000484268 PKHD1L1Q86WI1 4243 aa3.41□□□□□ -1.86
ABCA13-206ENST00000484268 LPAP08519 4548 aa3.41□□□□□ -1.86
ABCA13-206ENST00000484268 BIRC6Q9NR09 4857 aa3.4□□□□□ -1.87
ABCA13-206ENST00000484268 FAT3Q8TDW7 4589 aa3.37□□□□□ -1.87
ABCA13-206ENST00000484268 KRTAP19-4Q3LI73 84 aa3.36□□□□□ -1.87
ABCA13-206ENST00000484268 KRTAP10-4P60372 401 aaPredicted RBP3.34□□□□□ -1.87
ABCA13-206ENST00000484268 R4GN34 69 aa3.34□□□□□ -1.87
ABCA13-206ENST00000484268 LRP2P98164 4655 aa3.32□□□□□ -1.88
ABCA13-206ENST00000484268 A0A1B0GVY2 172 aa3.31□□□□□ -1.88
ABCA13-206ENST00000484268 EPPK1P58107 5090 aaKnown RBP3.29□□□□□ -1.88
ABCA13-206ENST00000484268 PP632Q6XCG6 107 aa3.29□□□□□ -1.88
ABCA13-206ENST00000484268 HERC2O95714 4834 aa3.28□□□□□ -1.89
ABCA13-206ENST00000484268 TNXBP22105 4242 aa3.27□□□□□ -1.89
ABCA13-206ENST00000484268 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
ABCA13-206ENST00000484268 RYR1P21817 5038 aa3.21□□□□□ -1.9
ABCA13-206ENST00000484268 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
ABCA13-206ENST00000484268 KRTAP9-6A0A140TA67 174 aa3.17□□□□□ -1.9
ABCA13-206ENST00000484268 KRTAP9-7A8MTY7 169 aa3.17□□□□□ -1.9
ABCA13-206ENST00000484268 Q5VSD8 79 aa3.16□□□□□ -1.9
ABCA13-206ENST00000484268 KRTAP17-1Q9BYP8 105 aa3.16□□□□□ -1.9
ABCA13-206ENST00000484268 KRTAP19-1Q8IUB9 90 aa3.15□□□□□ -1.9
ABCA13-206ENST00000484268 ABCA13Q86UQ4 5058 aa3.13□□□□□ -1.91
ABCA13-206ENST00000484268 LCE4AQ5TA78 99 aa3.13□□□□□ -1.91
ABCA13-206ENST00000484268 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
ABCA13-206ENST00000484268 PCLOQ9Y6V0 5065 aa3.12□□□□□ -1.91
ABCA13-206ENST00000484268 KIAA1109Q2LD37 5005 aa3.12□□□□□ -1.91
ABCA13-206ENST00000484268 KRTAP4-8Q9BYQ9 185 aa3.11□□□□□ -1.91
ABCA13-206ENST00000484268 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
ABCA13-206ENST00000484268 MT1HL1P0DM35 61 aa3.08□□□□□ -1.92
ABCA13-206ENST00000484268 MUC2Q02817 5179 aa3.08□□□□□ -1.92
ABCA13-206ENST00000484268 TNP1P09430 55 aa3.07□□□□□ -1.92
ABCA13-206ENST00000484268 INE1O15225 51 aa3.06□□□□□ -1.92
ABCA13-206ENST00000484268 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
ABCA13-206ENST00000484268 KRTAP4-1Q9BYQ7 146 aa3.04□□□□□ -1.92
ABCA13-206ENST00000484268 MUC17Q685J3 4493 aa3.01□□□□□ -1.93
ABCA13-206ENST00000484268 KRTAP4-5Q9BYR2 181 aa3□□□□□ -1.93
ABCA13-206ENST00000484268 KRTAP9-3Q9BYQ3 159 aa2.99□□□□□ -1.93
ABCA13-206ENST00000484268 KRTAP9-2Q9BYQ4 174 aa2.99□□□□□ -1.93
ABCA13-206ENST00000484268 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
ABCA13-206ENST00000484268 LCE5AQ5TCM9 118 aa2.97□□□□□ -1.93
ABCA13-206ENST00000484268 KRTAP4-8A0A0G2JLE6 195 aa2.95□□□□□ -1.94
ABCA13-206ENST00000484268 LCE3AQ5TA76 89 aa2.91□□□□□ -1.94
ABCA13-206ENST00000484268 KRTAP19-2Q3LHN2 52 aa2.91□□□□□ -1.94
ABCA13-206ENST00000484268 KRTAP4-7Q9BYR0 210 aa2.91□□□□□ -1.94
ABCA13-206ENST00000484268 LCE3BQ5TA77 95 aa2.9□□□□□ -1.95
ABCA13-206ENST00000484268 FAT4Q6V0I7 4981 aa2.89□□□□□ -1.95
ABCA13-206ENST00000484268 HERC1Q15751 4861 aa2.87□□□□□ -1.95
ABCA13-206ENST00000484268 HMCN2Q8NDA2 5059 aa2.87□□□□□ -1.95
ABCA13-206ENST00000484268 FLGP20930 4061 aaPredicted RBP2.85□□□□□ -1.95
ABCA13-206ENST00000484268 KRTAP8-1Q8IUC2 63 aa2.8□□□□□ -1.96
ABCA13-206ENST00000484268 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
ABCA13-206ENST00000484268 KRTAP9-8Q9BYQ0 159 aa2.8□□□□□ -1.96
ABCA13-206ENST00000484268 SPRR2GQ9BYE4 73 aa2.76□□□□□ -1.97
ABCA13-206ENST00000484268 KRTAP10-12P60413 245 aa2.75□□□□□ -1.97
ABCA13-206ENST00000484268 LCE1DQ5T752 114 aa2.75□□□□□ -1.97
ABCA13-206ENST00000484268 RNF213Q63HN8 5207 aa2.74□□□□□ -1.97
ABCA13-206ENST00000484268 KRTAP4-9Q9BYQ8 210 aa2.74□□□□□ -1.97
ABCA13-206ENST00000484268 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
ABCA13-206ENST00000484268 UBR4Q5T4S7 5183 aa2.74□□□□□ -1.97
ABCA13-206ENST00000484268 M0R2T5 61 aa2.72□□□□□ -1.97
ABCA13-206ENST00000484268 KRTAP10-10P60014 251 aa2.72□□□□□ -1.97
ABCA13-206ENST00000484268 KRTAP12-3P60328 96 aa2.71□□□□□ -1.97
ABCA13-206ENST00000484268 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
ABCA13-206ENST00000484268 KMT2DO14686 5537 aa2.66□□□□□ -1.98
ABCA13-206ENST00000484268 KRTAP10-5P60370 271 aa2.66□□□□□ -1.98
ABCA13-206ENST00000484268 MT1FP04733 61 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms