RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 KRTAP19-6Q3LI70 58 aa10.1□□□□□ -0.79
CNTNAP3B-208ENST00000484254 A8MUN3 132 aa10.09□□□□□ -0.79
CNTNAP3B-208ENST00000484254 SCGB1A1P11684 91 aa10.09□□□□□ -0.79
CNTNAP3B-208ENST00000484254 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.07□□□□□ -0.8
CNTNAP3B-208ENST00000484254 H3BPC8 53 aa10.07□□□□□ -0.8
CNTNAP3B-208ENST00000484254 K7ERU9 68 aa10.05□□□□□ -0.8
CNTNAP3B-208ENST00000484254 IMUPQ9GZP8 106 aa10.05□□□□□ -0.8
CNTNAP3B-208ENST00000484254 NDUFC1O43677 76 aa10.03□□□□□ -0.8
CNTNAP3B-208ENST00000484254 MT-ATP8P03928 68 aa10□□□□□ -0.81
CNTNAP3B-208ENST00000484254 SPRR2GQ9BYE4 73 aa9.99□□□□□ -0.81
CNTNAP3B-208ENST00000484254 H0YAA0 97 aa9.92□□□□□ -0.82
CNTNAP3B-208ENST00000484254 KRTAP19-8Q3LI54 63 aa9.91□□□□□ -0.82
CNTNAP3B-208ENST00000484254 CRIPTQ9P021 101 aa9.9□□□□□ -0.82
CNTNAP3B-208ENST00000484254 KRTAP9-7A8MTY7 169 aa9.89□□□□□ -0.83
CNTNAP3B-208ENST00000484254 Q5VV11 94 aa9.89□□□□□ -0.83
CNTNAP3B-208ENST00000484254 MT1BP07438 61 aa9.88□□□□□ -0.83
CNTNAP3B-208ENST00000484254 SMIM20Q8N5G0 67 aa9.87□□□□□ -0.83
CNTNAP3B-208ENST00000484254 DMAC1Q96GE9 116 aa9.86□□□□□ -0.83
CNTNAP3B-208ENST00000484254 TRAV7A0A075B6U4 112 aa9.85□□□□□ -0.83
CNTNAP3B-208ENST00000484254 ADM2Q7Z4H4 148 aa9.8□□□□□ -0.84
CNTNAP3B-208ENST00000484254 MACF1Q9UPN3 7388 aaKnown RBP9.79□□□□□ -0.84
CNTNAP3B-208ENST00000484254 A6NN06 94 aa9.69□□□□□ -0.86
CNTNAP3B-208ENST00000484254 ACYP2P14621 99 aa9.66□□□□□ -0.86
CNTNAP3B-208ENST00000484254 SYNE2Q8WXH0 6885 aaKnown RBP9.64□□□□□ -0.87
CNTNAP3B-208ENST00000484254 KRTAP10-5P60370 271 aa9.62□□□□□ -0.87
CNTNAP3B-208ENST00000484254 SNURFQ9Y675 71 aa9.61□□□□□ -0.87
CNTNAP3B-208ENST00000484254 P0C880 135 aa9.6□□□□□ -0.87
CNTNAP3B-208ENST00000484254 C20orf197Q8N268 126 aa9.6□□□□□ -0.87
CNTNAP3B-208ENST00000484254 SERP2Q8N6R1 65 aa9.57□□□□□ -0.88
CNTNAP3B-208ENST00000484254 KRTAP3-2Q9BYR7 98 aa9.55□□□□□ -0.88
CNTNAP3B-208ENST00000484254 R4GN34 69 aa9.53□□□□□ -0.88
CNTNAP3B-208ENST00000484254 SPTSSBQ8NFR3 76 aa9.52□□□□□ -0.89
CNTNAP3B-208ENST00000484254 KRTAP6-3Q3LI67 103 aa9.49□□□□□ -0.89
CNTNAP3B-208ENST00000484254 SPANXA2-OT1Q8N9U9 137 aa9.49□□□□□ -0.89
CNTNAP3B-208ENST00000484254 CHKB-CPT1BH3BT56 60 aa9.47□□□□□ -0.89
CNTNAP3B-208ENST00000484254 M0QZ58 72 aa9.46□□□□□ -0.9
CNTNAP3B-208ENST00000484254 PLAC4Q8WY50 150 aa9.41□□□□□ -0.9
CNTNAP3B-208ENST00000484254 COX7CP15954 63 aa9.32□□□□□ -0.92
CNTNAP3B-208ENST00000484254 PRO2289Q9P1D8 64 aa9.32□□□□□ -0.92
CNTNAP3B-208ENST00000484254 MT1XP80297 61 aa9.31□□□□□ -0.92
CNTNAP3B-208ENST00000484254 LINC01554Q52M75 96 aa9.31□□□□□ -0.92
CNTNAP3B-208ENST00000484254 COA5Q86WW8 74 aa9.2□□□□□ -0.94
CNTNAP3B-208ENST00000484254 H7BZZ5 65 aa9.14□□□□□ -0.95
CNTNAP3B-208ENST00000484254 CYSTM1Q9H1C7 97 aa9.14□□□□□ -0.95
CNTNAP3B-208ENST00000484254 KRTAP5-9P26371 169 aa9.13□□□□□ -0.95
CNTNAP3B-208ENST00000484254 NEBP20929 6669 aa9.07□□□□□ -0.96
CNTNAP3B-208ENST00000484254 MUC12Q9UKN1 5478 aa9.07□□□□□ -0.96
CNTNAP3B-208ENST00000484254 KRTAP12-2P59991 146 aa9.06□□□□□ -0.96
CNTNAP3B-208ENST00000484254 ANAPC13Q9BS18 74 aa9.06□□□□□ -0.96
CNTNAP3B-208ENST00000484254 KRTAP13-4Q3LI77 160 aa9.03□□□□□ -0.96
CNTNAP3B-208ENST00000484254 KMT2DO14686 5537 aa9□□□□□ -0.97
CNTNAP3B-208ENST00000484254 SEC61GP60059 68 aa8.99□□□□□ -0.97
CNTNAP3B-208ENST00000484254 SERP1Q9Y6X1 66 aa8.96□□□□□ -0.98
CNTNAP3B-208ENST00000484254 KRTAP8-1Q8IUC2 63 aa8.91□□□□□ -0.98
CNTNAP3B-208ENST00000484254 MDN1Q9NU22 5596 aa8.89□□□□□ -0.99
CNTNAP3B-208ENST00000484254 CCDC179H3BU77 68 aa8.88□□□□□ -0.99
CNTNAP3B-208ENST00000484254 SPRR2FQ96RM1 72 aa8.88□□□□□ -0.99
CNTNAP3B-208ENST00000484254 KRTAP10-7P60409 375 aaPredicted RBP8.87□□□□□ -0.99
CNTNAP3B-208ENST00000484254 KRTAP10-12P60413 245 aa8.85□□□□□ -0.99
CNTNAP3B-208ENST00000484254 KRTAP4-8A0A0G2JLE6 195 aa8.84□□□□□ -0.99
CNTNAP3B-208ENST00000484254 KRTAP4-8Q9BYQ9 185 aa8.84□□□□□ -0.99
CNTNAP3B-208ENST00000484254 A0A1B0GU33 70 aa8.82□□□□□ -1
CNTNAP3B-208ENST00000484254 SPATA8Q6RVD6 105 aa8.79□□□□□ -1
CNTNAP3B-208ENST00000484254 CAMK2N1Q7Z7J9 78 aa8.79□□□□□ -1
CNTNAP3B-208ENST00000484254 A0A0D9SG42 100 aa8.77□□□□□ -1.01
CNTNAP3B-208ENST00000484254 ATP5EP56381 51 aaPredicted RBP8.74□□□□□ -1.01
CNTNAP3B-208ENST00000484254 A0A1B0GU69 56 aa8.73□□□□□ -1.01
CNTNAP3B-208ENST00000484254 SPRR2EP22531 72 aa8.71□□□□□ -1.02
CNTNAP3B-208ENST00000484254 SPRR2BP35325 72 aa8.71□□□□□ -1.02
CNTNAP3B-208ENST00000484254 SPRR2AP35326 72 aa8.71□□□□□ -1.02
CNTNAP3B-208ENST00000484254 KRTAP20-1Q3LI63 56 aa8.69□□□□□ -1.02
CNTNAP3B-208ENST00000484254 LCE1AQ5T7P2 110 aa8.63□□□□□ -1.03
CNTNAP3B-208ENST00000484254 SPINT4Q6UDR6 99 aa8.63□□□□□ -1.03
CNTNAP3B-208ENST00000484254 KRTAP12-1P59990 96 aa8.61□□□□□ -1.03
CNTNAP3B-208ENST00000484254 SMIM26A0A096LP01 95 aa8.57□□□□□ -1.04
CNTNAP3B-208ENST00000484254 TMEM258P61165 79 aa8.56□□□□□ -1.04
CNTNAP3B-208ENST00000484254 KRTAP2-3P0C7H8 128 aa8.53□□□□□ -1.04
CNTNAP3B-208ENST00000484254 KRTAP2-4Q9BYR9 128 aa8.53□□□□□ -1.04
CNTNAP3B-208ENST00000484254 PRR15LQ9BU68 103 aa8.52□□□□□ -1.05
CNTNAP3B-208ENST00000484254 A8MU10 97 aa8.49□□□□□ -1.05
CNTNAP3B-208ENST00000484254 LINC01558Q9Y6Z2 57 aa8.49□□□□□ -1.05
CNTNAP3B-208ENST00000484254 SPRR2DP22532 72 aa8.42□□□□□ -1.06
CNTNAP3B-208ENST00000484254 KRTAP19-7Q3SYF9 63 aa8.32□□□□□ -1.08
CNTNAP3B-208ENST00000484254 KRTAP2-2Q9BYT5 123 aa8.27□□□□□ -1.09
CNTNAP3B-208ENST00000484254 KRTAP2-1Q9BYU5 128 aa8.27□□□□□ -1.09
CNTNAP3B-208ENST00000484254 UQCR11O14957 56 aa8.24□□□□□ -1.09
CNTNAP3B-208ENST00000484254 MT1EP04732 61 aa8.24□□□□□ -1.09
CNTNAP3B-208ENST00000484254 C10orf95Q9H7T3 257 aa8.22□□□□□ -1.09
CNTNAP3B-208ENST00000484254 LCE3BQ5TA77 95 aa8.18□□□□□ -1.1
CNTNAP3B-208ENST00000484254 TNP1P09430 55 aa8.16□□□□□ -1.1
CNTNAP3B-208ENST00000484254 KRTAP19-5Q3LI72 72 aa8.15□□□□□ -1.1
CNTNAP3B-208ENST00000484254 LCE5AQ5TCM9 118 aa8.14□□□□□ -1.11
CNTNAP3B-208ENST00000484254 KRTAP19-3Q7Z4W3 81 aa8.13□□□□□ -1.11
CNTNAP3B-208ENST00000484254 V9GYY9 64 aa8.08□□□□□ -1.12
CNTNAP3B-208ENST00000484254 MIR22HGQ0VDD5 57 aa8.07□□□□□ -1.12
CNTNAP3B-208ENST00000484254 LCE3AQ5TA76 89 aa8.05□□□□□ -1.12
CNTNAP3B-208ENST00000484254 Q1T7F1 81 aa8.03□□□□□ -1.12
CNTNAP3B-208ENST00000484254 PSPHP1O15172 72 aa8□□□□□ -1.13
CNTNAP3B-208ENST00000484254 MT1GP13640 62 aa7.97□□□□□ -1.13
CNTNAP3B-208ENST00000484254 MT1LQ93083 61 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms