RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 FAM236DA0A1B0GTK5 79 aa4.52□□□□□ -1.69
COL8A1-207ENST00000483969 FAM236CP0DP71 79 aa4.52□□□□□ -1.69
COL8A1-207ENST00000483969 FAM240AA0A1B0GVK7 77 aa4.51□□□□□ -1.69
COL8A1-207ENST00000483969 HCG22E2RYF7 251 aa4.51□□□□□ -1.69
COL8A1-207ENST00000483969 HRES1P13985 223 aa4.51□□□□□ -1.69
COL8A1-207ENST00000483969 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
COL8A1-207ENST00000483969 ATP5EP2Q5VTU8 51 aa4.46□□□□□ -1.7
COL8A1-207ENST00000483969 Q5W150 140 aa4.46□□□□□ -1.7
COL8A1-207ENST00000483969 TP53AIP1Q9HCN2 124 aa4.46□□□□□ -1.7
COL8A1-207ENST00000483969 J3QR89 54 aa4.45□□□□□ -1.7
COL8A1-207ENST00000483969 LINC00643Q86TS7 51 aa4.45□□□□□ -1.7
COL8A1-207ENST00000483969 C7orf65Q6ZTY9 151 aa4.44□□□□□ -1.7
COL8A1-207ENST00000483969 HIST1H4AP62805 103 aaKnown RBP4.43□□□□□ -1.7
COL8A1-207ENST00000483969 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
COL8A1-207ENST00000483969 H1FX-AS1Q4G0G2 97 aa4.38□□□□□ -1.71
COL8A1-207ENST00000483969 UQCRQO14949 82 aa4.35□□□□□ -1.71
COL8A1-207ENST00000483969 C4orf26Q17RF5 130 aa4.35□□□□□ -1.71
COL8A1-207ENST00000483969 FLGP20930 4061 aaPredicted RBP4.35□□□□□ -1.71
COL8A1-207ENST00000483969 A0A087WVE0 104 aa4.34□□□□□ -1.71
COL8A1-207ENST00000483969 TRAV22A0A0B4J277 110 aa4.34□□□□□ -1.71
COL8A1-207ENST00000483969 LOC101927531A0A1B0GV80 90 aa4.32□□□□□ -1.72
COL8A1-207ENST00000483969 K7ERU9 68 aa4.32□□□□□ -1.72
COL8A1-207ENST00000483969 ATOX1O00244 68 aa4.32□□□□□ -1.72
COL8A1-207ENST00000483969 CYP4F30PQ9H0H9 118 aa4.32□□□□□ -1.72
COL8A1-207ENST00000483969 C1orf64Q8NEQ6 169 aa4.31□□□□□ -1.72
COL8A1-207ENST00000483969 H0Y9P7 68 aa4.3□□□□□ -1.72
COL8A1-207ENST00000483969 SCGB1A1P11684 91 aa4.29□□□□□ -1.72
COL8A1-207ENST00000483969 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
COL8A1-207ENST00000483969 MP68P56378 58 aa4.28□□□□□ -1.72
COL8A1-207ENST00000483969 IMUPQ9GZP8 106 aa4.28□□□□□ -1.72
COL8A1-207ENST00000483969 MT2AP02795 61 aa4.27□□□□□ -1.73
COL8A1-207ENST00000483969 KRTAP10-10P60014 251 aa4.27□□□□□ -1.73
COL8A1-207ENST00000483969 C5orf47Q569G3 176 aa4.27□□□□□ -1.73
COL8A1-207ENST00000483969 OCR1Q9BZK8 76 aa4.26□□□□□ -1.73
COL8A1-207ENST00000483969 LINC00208Q96KT6 92 aa4.25□□□□□ -1.73
COL8A1-207ENST00000483969 S4R3F8 94 aa4.24□□□□□ -1.73
COL8A1-207ENST00000483969 H3BPC8 53 aa4.23□□□□□ -1.73
COL8A1-207ENST00000483969 CSAG1Q6PB30 78 aa4.23□□□□□ -1.73
COL8A1-207ENST00000483969 MT-ATP8P03928 68 aa4.22□□□□□ -1.73
COL8A1-207ENST00000483969 MT1FP04733 61 aa4.22□□□□□ -1.73
COL8A1-207ENST00000483969 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
COL8A1-207ENST00000483969 SMIM20Q8N5G0 67 aa4.2□□□□□ -1.74
COL8A1-207ENST00000483969 A8MUN3 132 aa4.19□□□□□ -1.74
COL8A1-207ENST00000483969 LCA10Q71F78 164 aa4.19□□□□□ -1.74
COL8A1-207ENST00000483969 KLKP1Q107X0 134 aa4.17□□□□□ -1.74
COL8A1-207ENST00000483969 TRAV7A0A075B6U4 112 aa4.16□□□□□ -1.74
COL8A1-207ENST00000483969 FAM236AA0A1B0GUQ0 79 aa4.15□□□□□ -1.75
COL8A1-207ENST00000483969 FAM236BA0A1B0GV22 79 aa4.15□□□□□ -1.75
COL8A1-207ENST00000483969 NDUFC1O43677 76 aa4.15□□□□□ -1.75
COL8A1-207ENST00000483969 LCE3AQ5TA76 89 aa4.15□□□□□ -1.75
COL8A1-207ENST00000483969 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
COL8A1-207ENST00000483969 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
COL8A1-207ENST00000483969 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
COL8A1-207ENST00000483969 DMAC1Q96GE9 116 aa4.07□□□□□ -1.76
COL8A1-207ENST00000483969 SERP2Q8N6R1 65 aa4.06□□□□□ -1.76
COL8A1-207ENST00000483969 H0YAA0 97 aa4.05□□□□□ -1.76
COL8A1-207ENST00000483969 ACYP2P14621 99 aa4.05□□□□□ -1.76
COL8A1-207ENST00000483969 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
COL8A1-207ENST00000483969 KRTAP12-2P59991 146 aa4.04□□□□□ -1.76
COL8A1-207ENST00000483969 SNURFQ9Y675 71 aa4.04□□□□□ -1.76
COL8A1-207ENST00000483969 USH2AO75445 5202 aa4.03□□□□□ -1.76
COL8A1-207ENST00000483969 C20orf197Q8N268 126 aa4.02□□□□□ -1.77
COL8A1-207ENST00000483969 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
COL8A1-207ENST00000483969 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
COL8A1-207ENST00000483969 ADM2Q7Z4H4 148 aa4□□□□□ -1.77
COL8A1-207ENST00000483969 SPTSSBQ8NFR3 76 aa4□□□□□ -1.77
COL8A1-207ENST00000483969 SPANXA2-OT1Q8N9U9 137 aa3.99□□□□□ -1.77
COL8A1-207ENST00000483969 CHKB-CPT1BH3BT56 60 aa3.98□□□□□ -1.77
COL8A1-207ENST00000483969 KRTAP19-6Q3LI70 58 aa3.98□□□□□ -1.77
COL8A1-207ENST00000483969 COX7CP15954 63 aa3.97□□□□□ -1.77
COL8A1-207ENST00000483969 Q5VV11 94 aa3.97□□□□□ -1.77
COL8A1-207ENST00000483969 KRTAP19-8Q3LI54 63 aa3.96□□□□□ -1.78
COL8A1-207ENST00000483969 SSPOA2VEC9 5147 aa3.94□□□□□ -1.78
COL8A1-207ENST00000483969 MT1BP07438 61 aa3.92□□□□□ -1.78
COL8A1-207ENST00000483969 R4GN34 69 aa3.91□□□□□ -1.78
COL8A1-207ENST00000483969 P0C880 135 aa3.9□□□□□ -1.79
COL8A1-207ENST00000483969 ANAPC13Q9BS18 74 aa3.9□□□□□ -1.79
COL8A1-207ENST00000483969 A8MU10 97 aa3.88□□□□□ -1.79
COL8A1-207ENST00000483969 FCGBPQ9Y6R7 5405 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-207ENST00000483969 A6NN06 94 aa3.87□□□□□ -1.79
COL8A1-207ENST00000483969 M0QZ58 72 aa3.87□□□□□ -1.79
COL8A1-207ENST00000483969 H7BZZ5 65 aa3.86□□□□□ -1.79
COL8A1-207ENST00000483969 COA5Q86WW8 74 aa3.85□□□□□ -1.79
COL8A1-207ENST00000483969 PLAC4Q8WY50 150 aa3.85□□□□□ -1.79
COL8A1-207ENST00000483969 SEC61GP60059 68 aa3.81□□□□□ -1.8
COL8A1-207ENST00000483969 LINC01554Q52M75 96 aa3.81□□□□□ -1.8
COL8A1-207ENST00000483969 KRTAP5-5Q701N2 237 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-207ENST00000483969 CYSTM1Q9H1C7 97 aa3.81□□□□□ -1.8
COL8A1-207ENST00000483969 CCDC179H3BU77 68 aa3.79□□□□□ -1.8
COL8A1-207ENST00000483969 SERP1Q9Y6X1 66 aa3.79□□□□□ -1.8
COL8A1-207ENST00000483969 PRO2289Q9P1D8 64 aa3.78□□□□□ -1.8
COL8A1-207ENST00000483969 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
COL8A1-207ENST00000483969 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
COL8A1-207ENST00000483969 ATP5EP56381 51 aaPredicted RBP3.74□□□□□ -1.81
COL8A1-207ENST00000483969 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
COL8A1-207ENST00000483969 MT1XP80297 61 aa3.7□□□□□ -1.82
COL8A1-207ENST00000483969 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
COL8A1-207ENST00000483969 A0A1B0GU33 70 aa3.69□□□□□ -1.82
COL8A1-207ENST00000483969 A0A1B0GU69 56 aa3.68□□□□□ -1.82
COL8A1-207ENST00000483969 TMEM258P61165 79 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms